Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi258g00051 ATGGGATTTCCCATAGGCTACCCTGAACTCTCCGTTCCCAATTTCTTCCTTTACATTCTCTCTATCCTCGCCTTTCTAAGATCCATAGTCATCTCCTTCCTCTCTCTCCTCCACCTCTCCGACTTCCTCGACACCGATTTCTCCACCGCCACCGTAACAGAATCAAACCCCCACCGTCCTACCCTCTCCGCAATCCTCATCCGCGATTTCCTCCCGGTCGTCAATTTCCGTGACCTCGCCGGAGATTCGAAAACAGTAGAGTGTGCGGTGTGTCTGGACGAATTTTCCGGCGAGGAAGAGATCAGGTGTATGACGAATTGTAAACATATTTTTCACCGGACGTGTGTGGACCGTTGGATTGATCATGATCAGAAGACGTGTCCGCTTTGTAGGACCCACTTTGTACCTTGTGATAAAATGGAAGATTATAATCAACGGTTATGGAAGGCTTGTGAATCTGAATGTGTAGATGATGATGTTTCTCTTTTTTCTCAACATGATGACGATCACTACATTGCTTCACTTTGA 528 0.4678 MGFPIGYPELSVPNFFLYILSILAFLRSIVISFLSLLHLSDFLDTDFSTATVTESNPHRPTLSAILIRDFLPVVNFRDLAGDSKTVECAVCLDEFSGEEEIRCMTNCKHIFHRTCVDRWIDHDQKTCPLCRTHFVPCDKMEDYNQRLWKACESECVDDDVSLFSQHDDDHYIASL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi258g00051 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 138 IPR013083 -
Vivi258g00051 175 PANTHER RING ZINC FINGER PROTEIN-RELATED 29 166 - -
Vivi258g00051 175 SMART ring_2 88 130 IPR001841 -
Vivi258g00051 175 ProSiteProfiles Zinc finger RING-type profile. 88 131 IPR001841 -
Vivi258g00051 175 Pfam Ring finger domain 87 131 IPR001841 -
Vivi258g00051 175 SUPERFAMILY RING/U-box 87 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi258g00051 1 161 C3H Transcription Factor Family AT1G63840 41.916 6.43e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi258g00051 K16281 - gmx:100813224 207.994