Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi258g00044 ATGGAAGCACTCACTCTATGTGCAGCATCCTCTTCTTCTTCTTCTCCTTGCAGTTCAAGTTCAACCACAAGGCTATGCACCTACCATGTGTTTTTGAGTTTTAGAGGAGAAGATACTCGCAAAGGATTCACCGATCATCTATGTGCTTCCCTTGAAAGAAAAGGGATCACAACTTTCAGAGATGACAAAGATCTTGAGAGAGGCCAAGTCATTTCCCAAAAGCTAATCAATGCAATTCAAGATTCTATGTTTGCCATCACTATTCTCTCACCAGACTATGCTTCTTCCACTTGGTGTTTGGATGAGCTGCAAATGATCATGGAGTGTAGCACTAGCAAGAACAACCTGCAGGGTCTTGAAGTTTTGCCAGTCTTCTATGGTGTGGATCCGTCTGATGTTCGGCATCAAAGAGGAAGCTATGAGGATGCTTTCAGAAAACATCAAGAGAAATTTGGTGAACACAGTGACAGGGTTGAAAGATGGAGAGATGCTTTGGCACAAGTTGCCAGTTACTCTGGATGGGACTCCAATGGCCAGCATGAGGCATCACTAGTGGAAAACATTGCTCAACACATACATAGAAAGTTGGTTCCGAAGTTGCCATCTTGCACCGAGAGCCTTGTTGGGATTGCTTCAAAGGTGGATGAAGTGAACAAGCTCATAGGTATGCAGTTAAACGATGTGCGCTTTATAGGCATATGGGGTATGGGTGGCATAGGCAAATCAACTATTGCTAGATCTGTCTATAAAGCAATCCAAGGTGAATTTGAACTTACTTGCTTTGTTGAGAATGTCAGAGAGTTGTCTGAGAGAAAAGGTTTAGTTCACATACAAAGACAACTTCTATCTCAGCTAAGTATAAGTAAGAATGATTTTCATAATTTGTACGATGGGAAAAACACAATACGAAACTCTTTATGCAGAAAAAAGGTTCTGCTTGTTCTTGATGATGTGAATGATGTAAACCAGTTGGAGAATTTAGCTGCGAAACAAGATTGGTTCGGTCCGGGAAGTAGAGTAATAATCACAACTAGAGATAAACACTTGCTAGTGACACATGGAGTACATAAAACTTATGAAGTTGGAATGCTATTCCAAAAAGATGCCCTTAATCTCTTTTGTTTGAAAGCCTTTAAAGGAGATAAACCACAAGAAGGGTATTTGGATTTGACCAAAGAAGTGGTGGACTATACGGGTGGTCTTCCATTGGCACTCGAGGTGTTAGGTTCCTATCTCTATGGAAGAAATGTCGATGTTTGGCATAGTGCGATTAAGAAAATAAGAAGTGTTCCACACCCTAGAATCCAAGATAAACTGAAAATAAGTTATGAGAGTTTAGATCCCATGGAGAAGGATATTTTTCTAGATATTGCATGTTTCTTCAAGGGAATGAAGACAGATAAAGTAATAGATTTATTGGAATGTTACGGTTATTTCCCTCAAATTGGAATCGAAATTTTGATTGAAAGATCTTTGATAACTATAGATTGCAGGGATGAAAAACTTGATATGCATGATTTGCTTCAAGAAATGGGCAGGGATATTGTATTTCAGGAGTCTCCAAATGATCCAAGCAGACGTAGTAGGTTATGGTCTCGAGACGACATTGATCATGTGTTGACAAAAAATAAGGGAACTGATGCGATTAACAGCATAGCTATGAAGTTACTTCAACCATATGAAGCATGCTGGAGCACTGAAGCATTCTTTAAGACAAGTCAGCTAAAATATCTCAGTTTATGCGAGATGCAACTTCCCCTCGGCCTCAATTGCCTCCCTAGCTCTTTGAAAGTTCTTCGCTGGAGAGGATGTCCTTTGAAAGCTTTGCCACTAACAAATCCACTCGATGAAGTTGTTAACATTAAACTATCTCATAGCAAAATTCAACAACTTTGGCAAGGAATAAAGTTTATGGAAAAGCTGAAGTACTTGAATATGGCTTTTTCCAAGAACCTAAAGAGATTGCCTGATTTTTCCGGTGTTCCAAATCTTGAAAACTTGATTCTTAAAGGATGTGCAAGCCTAAACGAAGTTCATCCGTCTCTTGTACGTCACAAGAAAGTTGTTTTGATGAATTTCGAAGACTGCAAAAGTCTTAAGTCTCTTCCAGGGAAATTGGAGATGAGTTCTCTGCAGATGTTAACTCTTTCTGGCTGTTCCGAATTTAAATTCCTTCCGGAATTCGGGGAAAACATGGAAAATCTATCATTGCTTGAGTTACAAGGAACAGCTATAAGAAAACTACCCTCATCACTTGGATCCCTAGTTGGACTTATTATGTTGAACTTAAAGGACTGCAAAAGTCTTGTTTGCATACCAGACACGATTCATGGATTGAATTCCCTCGTAACGTTGGACATTTCCGGATGTTCAAAACTTTGTAGATTGCCAGATGGTTTAAAGGAAATCAAGAGTTTGGAGGAACTCCTTGCCAATGATACTGCTATCGATGAACTACCTTCCTCCATTTTTTATCTAGATAGACTTAGAGTATTATCATTTTCCGGTTGCAAAGGTCCATTATCCAAGTCGAAGAATTGGTTTCTTCCCTTCAATTGGATGTTTGGGAGTCAACCAGATTCCACTGGATTCAGATTTCCAACTTCTGTCTCGAGTCTACCCTCTTTGAGATATATAAATCTAAGTTACTGTAACCTTTCTGACAAATCAATACCAGATTATTTTTGCCACCTATCATCGTTGAGTTCTTTGAATCTAACTGGTAACAATTTTGTTAGCATACCGAGCGCAATTTCTAAACTTCCACGACTGGATTTGCTTACTCTAAATTCCTGCCAGAAGCTACAATCGTTGCCAGAGCTTGCATCAAGTATGACACAGTTGGATGCAAGCAATTGTGATTCACTGGAAACTACGAAATTTAATCCAGCAAAGCCATGTAGTCTCTTTGCATCACCTAGACGACTAAACAATGTTCAAAAACTTTTTGGCAGCTTTATTGAGGCATTTTGTCTTCCATCTGCAAGATTTGACATGCTTATCCCTGGGGAAGTAATTCCCTCTTGGTTTGTTCCTCAAAGAACTGTTTCCTGGGCAAAAATACAAGTTCCTAAGAATTGTCCTCTAGATGATTGGGTAGGATTTTCTCTGTGTTTTCTATTAGAGAGTTATGCTGATCCACCTGAACTATGTAAGCATGAGATTGATTGTTATCTGTTTTCACCTAATGGTAAGCTGTTTATCAGCTCCAGAAGATTACCTCCTATGAATCCATGTCATCCTCATCTTTATATTCTCTACTTGTCCATTGATCAATTTCGCGACAGAATACTCAAAGATGATTGTTGGAATGACATTGAATTTGCATTGAAATGTTATTGCTGTCAATCGCTGCAAATAGTGAGGTGTGGTTCACGATTGGTATGTAAGCAAGATGTTGAAGTTTGGAACAAAGCGAAGAGTCAATTCAATGAGAGTTGA 3441 0.3909 MEALTLCAASSSSSSPCSSSSTTRLCTYHVFLSFRGEDTRKGFTDHLCASLERKGITTFRDDKDLERGQVISQKLINAIQDSMFAITILSPDYASSTWCLDELQMIMECSTSKNNLQGLEVLPVFYGVDPSDVRHQRGSYEDAFRKHQEKFGEHSDRVERWRDALAQVASYSGWDSNGQHEASLVENIAQHIHRKLVPKLPSCTESLVGIASKVDEVNKLIGMQLNDVRFIGIWGMGGIGKSTIARSVYKAIQGEFELTCFVENVRELSERKGLVHIQRQLLSQLSISKNDFHNLYDGKNTIRNSLCRKKVLLVLDDVNDVNQLENLAAKQDWFGPGSRVIITTRDKHLLVTHGVHKTYEVGMLFQKDALNLFCLKAFKGDKPQEGYLDLTKEVVDYTGGLPLALEVLGSYLYGRNVDVWHSAIKKIRSVPHPRIQDKLKISYESLDPMEKDIFLDIACFFKGMKTDKVIDLLECYGYFPQIGIEILIERSLITIDCRDEKLDMHDLLQEMGRDIVFQESPNDPSRRSRLWSRDDIDHVLTKNKGTDAINSIAMKLLQPYEACWSTEAFFKTSQLKYLSLCEMQLPLGLNCLPSSLKVLRWRGCPLKALPLTNPLDEVVNIKLSHSKIQQLWQGIKFMEKLKYLNMAFSKNLKRLPDFSGVPNLENLILKGCASLNEVHPSLVRHKKVVLMNFEDCKSLKSLPGKLEMSSLQMLTLSGCSEFKFLPEFGENMENLSLLELQGTAIRKLPSSLGSLVGLIMLNLKDCKSLVCIPDTIHGLNSLVTLDISGCSKLCRLPDGLKEIKSLEELLANDTAIDELPSSIFYLDRLRVLSFSGCKGPLSKSKNWFLPFNWMFGSQPDSTGFRFPTSVSSLPSLRYINLSYCNLSDKSIPDYFCHLSSLSSLNLTGNNFVSIPSAISKLPRLDLLTLNSCQKLQSLPELASSMTQLDASNCDSLETTKFNPAKPCSLFASPRRLNNVQKLFGSFIEAFCLPSARFDMLIPGEVIPSWFVPQRTVSWAKIQVPKNCPLDDWVGFSLCFLLESYADPPELCKHEIDCYLFSPNGKLFISSRRLPPMNPCHPHLYILYLSIDQFRDRILKDDCWNDIEFALKCYCCQSLQIVRCGSRLVCKQDVEVWNKAKSQFNES 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi258g00044 1146 SMART till_3 27 171 IPR000157 GO:0007165
Vivi258g00044 1146 FunFam Disease resistance protein (TIR-NBS-LRR class) 24 197 - -
Vivi258g00044 1146 SUPERFAMILY L domain-like 866 954 - -
Vivi258g00044 1146 SMART LRR_typ_2 873 897 IPR003591 -
Vivi258g00044 1146 SMART LRR_typ_2 898 921 IPR003591 -
Vivi258g00044 1146 SMART LRR_typ_2 732 755 IPR003591 -
Vivi258g00044 1146 SMART LRR_typ_2 803 826 IPR003591 -
Vivi258g00044 1146 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 728 IPR044974 GO:0006952
Vivi258g00044 1146 Pfam NB-ARC domain 218 446 IPR002182 GO:0043531
Vivi258g00044 1146 Gene3D - 20 194 IPR035897 -
Vivi258g00044 1146 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 174 IPR035897 -
Vivi258g00044 1146 PRINTS Disease resistance protein signature 777 793 - -
Vivi258g00044 1146 PRINTS Disease resistance protein signature 230 245 - -
Vivi258g00044 1146 PRINTS Disease resistance protein signature 305 319 - -
Vivi258g00044 1146 PRINTS Disease resistance protein signature 398 412 - -
Vivi258g00044 1146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 457 IPR027417 -
Vivi258g00044 1146 SUPERFAMILY L domain-like 504 838 - -
Vivi258g00044 1146 Gene3D - 364 447 IPR042197 -
Vivi258g00044 1146 Gene3D - 195 358 IPR027417 -
Vivi258g00044 1146 MobiDBLite consensus disorder prediction 1 21 - -
Vivi258g00044 1146 Pfam TIR domain 28 209 IPR000157 GO:0007165
Vivi258g00044 1146 Pfam C-JID domain 1001 1134 IPR045344 -
Vivi258g00044 1146 ProSiteProfiles TIR domain profile. 26 196 IPR000157 GO:0007165
Vivi258g00044 1146 Gene3D Ribonuclease Inhibitor 564 728 IPR032675 -
Vivi258g00044 1146 Gene3D Ribonuclease Inhibitor 731 983 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi258g00044 758 957 WRKY Transcription Factor Family AT4G12020 32.338 3.62e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi258g00044 - - gmx:100815486 1485.7