Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi256g00002 ATGCCGGACTTTAACGATTCCCTCACTCCGCCGTCACGTCCTGTCCCTGTCCGTGAGGATTGCTGGTCTGAGGAAGCTTCATCCACTCTGGTTGACGCTTGGGGTCGTCGGTACCTTGAACTGAACCGTGGGAATCTCCGGCAGAAAGATTGGCAGGATGTTGCTGATGCTGTTAACGCTCTTCATGGACATACGAAGAAAACTCATCGTACAGATGTTCAGTGTAAGAATCGAATCGACACGATTAAGAAGAAGTATAAGATCGAGAAAGCTAGGGTTTCGTCTTCGAATGGCGTGGTTTCTTCGACATGGCCGTTTTTCGAACGGTTAGATGCTTTGATTGGACCTAATTTTAATACGAAAAGAACTTCTTCATCACCGTCTCCGTCGCCGCCGGTTGCTTTACCTTTGGTTCCGTATCGGAAGTTTCCTTCTTCGTTGCCCTCGCCTGCTATTTCGGTTCCTCCGACTGCCGTTGCGCTTCCGCAGAAGAGGCCGATTGCGGCGGTGATGGATGATGGTTATTTCAGGAGGAATTATTCCGCGGTAGCCGCCGCAGCGGCTGCTGCGGAAGCTGATGAGGATGAGGAGGAAGATGAAGAAGAGGAAGTAGAAATAGAGGAGGAAGAGGTGGAGGTGGAGGAAGAGGAAGGTAGGGGAAGTGAAGTGGATGAAGGGGAGAAAGGGAGGGAAGGGATGAAGAGGTTGGCGAAGGCGATAGAGAGATTTGGTGAAATGTATGAGAGAGTGGAGGGGCAGAAACTGAGGCAGATGGTGGATTTGGAGAAACAAAGGATGCAGTTTGCTAAAGATATTGAAGTTCAGAGGATGCAGATGTTTATGGATACACAGGTTCAGCTGGAAAGAATCAAGCGTGGAAAACGATCCGGATCGAATGATATCTATAATAGCTAG 915 0.4918 MPDFNDSLTPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGVVSSTWPFFERLDALIGPNFNTKRTSSSPSPSPPVALPLVPYRKFPSSLPSPAISVPPTAVALPQKRPIAAVMDDGYFRRNYSAVAAAAAAAEADEDEEEDEEEEVEIEEEEVEVEEEEGRGSEVDEGEKGREGMKRLAKAIERFGEMYERVEGQKLRQMVDLEKQRMQFAKDIEVQRMQMFMDTQVQLERIKRGKRSGSNDIYNS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi256g00002 304 Gene3D - 22 88 - -
Vivi256g00002 304 MobiDBLite consensus disorder prediction 189 232 - -
Vivi256g00002 304 MobiDBLite consensus disorder prediction 1 20 - -
Vivi256g00002 304 MobiDBLite consensus disorder prediction 190 221 - -
Vivi256g00002 304 FunFam trihelix transcription factor ASIL2 22 88 - -
Vivi256g00002 304 Coils Coil 183 219 - -
Vivi256g00002 304 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Vivi256g00002 304 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 294 IPR044823 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi256g00002 18 304 Trihelix Transcription Factor Family AT3G14180 32.402 1.00e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi256g00002 Myb_DNA-bind_4 5.8e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi256g00002 - - gmx:100815241 446.817