Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00034 ATGTCAAGCTTCAAACATGTATCCATGTTCTTCTTTTTGTTCTTGGTTTTCAATTGTTTCTCCATGCTTGGATCCAACGCTAAAGTCCTACCACAAGATGAAGTGAAATTGCTCCAAACAATATCAGACAAGTTAGAAAACTTGAATTGGAAGGTTACACAAGGTTCTTGCAATGATGATAATGGATTTGGTAACAAGAATATTTCAAAGGATATTTTAAGCAGTGTCACATGTGATTGTACTTTCAACTCTAGCACTGTTTGCCATGTCACAAACATCTTGCTCAAGGGTCTAAATATATCTGGAGTTATTCCAAATGAATTTGGAAATCTCACTCAACTCAAAGTACTTGATCTCTCTAGGAATTACTTAAATGGTTCAATTCCAAAGAGCCTTGGAGTCCTCTCACTTGTGACATTGGCATTTTTGGGAAATCAACTTAGTGGTTCAATTCCCTCAGAACTTGGTAACATTGCAACACTTCAAGAACTGACCTTAGAGGATAATCTGCTTGAAGGACCTCTTCCTTCTAGCCTTGGAAATTTGAAACACTTGGAGGATTTAAAGCTTTCTGCAAATAATTTTACAGGGACGATACCAGAATCATATGGAAATCTGAAGAATCTCACTGATTTTAGGCTAGACGGAAGCAGTTTATCTGGGAAGATTCCGAGTTTTATGGGAAACTGGACGAAACTTGAAAGATTGGATTTGCAAGGCACGTCGATGGAAGGTCCTATTCCTCCTGCGATATCTCTCTTGAAAAGTTTGAAGGAATTGAGAATATCTGATTTGAAGGGGAACACAACCATGACATTTCCTGATCTGAAAAATTTGACACGCATGATAAGACTGGAATTGAGAAATTGCTTAATCACTGGTCCTATTTTAGACTCTATTGGTGAAATGGAAAATTTAAAAACACTAGATTTGAGTTCCAATAGATTGACTGGTCCAATTCCAGATTCATTTGAGAACTTGGAATATATCAATTTCATGTTTCTGACAAACAACTCTCTAAATGGAACAACTCCAGGATGGATACTGACCAACAAGCATAACTTCGATTTATCTTTCAACAATTTTTCTGAGTCTTCTGCAACTGATTGCCAGCCTTTGGACGTGAACTTAGCCTCCAGTGTCTCTCCTTCAGCAAACACTTCATTATCTTGTTTGAAGACGAACCTACCTTGTTCGGGAAAATCTAAGTATCACTCATTGTTCATAAATTGTGGAGGACCTGCAATAGAGATTGATGACAAAGAATATGAAGCCGACGAACATTTACGTGGAATTTCAAACTTTGTTCAAAGTCCTGATGGAAAATGGGCTTATAGCAGCACAGGAGTATTTCTAGGAAATGAAAAAGCTGATTATGTGGCAAAAAATGTTTTCTCTTTGAATATTAATGACTCTTCTAGATACTACCAAACAGCCCGCATTGCGCCGATATCTCTTAACTACTTTGGATTTTGTATGATGAAGGGAAACTATAATGTGAAACTTCATTTTGCTGAGATAATGTTTTCTAATGACCGGACTTTTAGCAGCCTTGGAAGGCGCATATTCGATGTTTCAATTCAAGGTCATAAATATTTAAAAGACTTTAACATTATGGAAGAAGCCGGTGGAGTTGGCAAGGGAATTACTAAGGACTTTAATGTTGATGTTAATGAAAGCACCTTGCAAATCCACTTATCTTGGGCAGGAAAAGGAACTAATGCAATTCCTATGCGAGGTGTATATGGACCGCTTATATCTGCTATCACCGTGACCCCAAACTTTAAAATTCCTTCAAATGGTTTGTCTGCTGGAGCGATTGCTGGAATTGTGATTGGATCATTGGCACTTGTTCTGTTGATACTCTTTGTCCTTTGGAAGATGGGTTACATTTTTCGGAAAGATCAAACAGACAAAGAACTCCTAGAATTGAAAACAGGCTATTTCAGTTTGAGACAAATTAAAGCTGCTACTAATAACTTTGATCCAGTAAATAAGATAGGTGAAGGAGGATTTGGGCCTGTTTACAAGGGTATACTATCAGATGGTGCTGTGATTGCTGTTAAACAGCTCTCGTCCAAATCAAAGCAAGGGAACCGCGAATTCGTAAACGAAATAGGCATGATATCTGCTTTGCAGCATCCCAATCTTGTGAAACTTTATGGATGTTGCATTGAAGGAAACCAATTGCTGCTTGTATATGAATACATGGAGAACAATAGTCTTGCTCGCGCTATTTTCGGTAAGCCAGAACAAAAGTTGAACTTGGACTGGCGCACGAGGATGAAGATTTGTGTAGGGATAGCAAGAGGTTTAGCCTATCTTCATGAGGAATCAAGGTTGAAAATAGTACACAGAGATATTAAGGCAACTAATGTCTTACTCGATAAGCATCTGAATGCTAAGATCTCTGATTTCGGTTTAGCCAAGCTTGACGAAGAAGAAAACACTCATATCAGCACGCGGATAGCTGGAACAATAGGCTACATGGCTCCTGAGTATGCTATGCGGGGTTACTTGACCGACAAAGCAGATGTATATAGTTTCGGAGTTGTAGCCTTAGAGATTGTAAGTGGAATGAGCAACACAAATTATAGGCCAAAAGAGGAGTTTGTTTATCTTTTGGATTGGGCCTATGTTCTCCAAGAACAAGGAAACCTTCTGGAATTGGTGGATCCAAGTCTCGGTTCAAAGTACTCATCAGAGGAGGCCATGAGAATGCTGCAATTGGCACTCCTTTGCACCAATCCATCTCCAACTCTTAGACCACCAATGTCATCGGTAGTGAGCATGCTCGAAGGAAACACTCCAATTCAAGCGCCGATCATCAAGCGAAGCGATAGTACAAGTGGCGCAAGGTTTAAAGCCTTTGAGCTTCTATCACATGATAGCCAAACTAATGTTTCTTCAACATCCTTACAAGATAGTAGAGAGCTAAGAGGCAAATCAATGGATGGACCATGGGTTGATTCTTCCATATCTTATCCAAGTAAAGATTATTCTTCATCTGATAGGCTTATTTGA 3024 0.3892 MSSFKHVSMFFFLFLVFNCFSMLGSNAKVLPQDEVKLLQTISDKLENLNWKVTQGSCNDDNGFGNKNISKDILSSVTCDCTFNSSTVCHVTNILLKGLNISGVIPNEFGNLTQLKVLDLSRNYLNGSIPKSLGVLSLVTLAFLGNQLSGSIPSELGNIATLQELTLEDNLLEGPLPSSLGNLKHLEDLKLSANNFTGTIPESYGNLKNLTDFRLDGSSLSGKIPSFMGNWTKLERLDLQGTSMEGPIPPAISLLKSLKELRISDLKGNTTMTFPDLKNLTRMIRLELRNCLITGPILDSIGEMENLKTLDLSSNRLTGPIPDSFENLEYINFMFLTNNSLNGTTPGWILTNKHNFDLSFNNFSESSATDCQPLDVNLASSVSPSANTSLSCLKTNLPCSGKSKYHSLFINCGGPAIEIDDKEYEADEHLRGISNFVQSPDGKWAYSSTGVFLGNEKADYVAKNVFSLNINDSSRYYQTARIAPISLNYFGFCMMKGNYNVKLHFAEIMFSNDRTFSSLGRRIFDVSIQGHKYLKDFNIMEEAGGVGKGITKDFNVDVNESTLQIHLSWAGKGTNAIPMRGVYGPLISAITVTPNFKIPSNGLSAGAIAGIVIGSLALVLLILFVLWKMGYIFRKDQTDKELLELKTGYFSLRQIKAATNNFDPVNKIGEGGFGPVYKGILSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARAIFGKPEQKLNLDWRTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGMSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKYSSEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGNTPIQAPIIKRSDSTSGARFKAFELLSHDSQTNVSSTSLQDSRELRGKSMDGPWVDSSISYPSKDYSSSDRLI 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00034 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 736 - -
Vivi255g00034 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Vivi255g00034 1007 Gene3D Ribonuclease Inhibitor 264 373 IPR032675 -
Vivi255g00034 1007 SUPERFAMILY Protein kinase-like (PK-like) 644 933 IPR011009 -
Vivi255g00034 1007 SUPERFAMILY L domain-like 67 367 - -
Vivi255g00034 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 594 - -
Vivi255g00034 1007 MobiDBLite consensus disorder prediction 967 1007 - -
Vivi255g00034 1007 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 34 198 - -
Vivi255g00034 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 964 - -
Vivi255g00034 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 199 266 - -
Vivi255g00034 1007 Gene3D Transferase(Phosphotransferase) domain 1 737 946 - -
Vivi255g00034 1007 Pfam Protein tyrosine and serine/threonine kinase 665 931 IPR001245 GO:0004672|GO:0006468
Vivi255g00034 1007 Pfam Leucine Rich Repeat 305 327 IPR001611 GO:0005515
Vivi255g00034 1007 Pfam Leucine Rich Repeat 113 135 IPR001611 GO:0005515
Vivi255g00034 1007 Gene3D - 405 594 - -
Vivi255g00034 1007 PRINTS Leucine-rich repeat signature 303 316 - -
Vivi255g00034 1007 PRINTS Leucine-rich repeat signature 114 127 - -
Vivi255g00034 1007 ProSiteProfiles Protein kinase domain profile. 661 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00034 1007 ProSiteProfiles Leucine-rich repeat profile. 305 327 IPR001611 GO:0005515
Vivi255g00034 1007 Gene3D Ribonuclease Inhibitor 26 252 IPR032675 -
Vivi255g00034 1007 CDD STKc_IRAK 667 934 - -
Vivi255g00034 1007 SMART serkin_6 661 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00034 1007 Gene3D Phosphorylase Kinase; domain 1 628 736 - -
Vivi255g00034 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase 737 944 - -
Vivi255g00034 1007 Pfam Malectin domain 407 589 IPR021720 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00034 10 1001 Receptor kinase-like Gene Family AT1G53440 62.908 0.0 1240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00034 PK_Tyr_Ser-Thr 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00034 - - gmx:121173337 1496.1