Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00032 ATGAAGATGAGCACTACCTCTCCACTTTTCTCCCTTTTAATCATTGCCATTTTGTTCTTATCTCTAACAGCTTTTGGGGCTAATACTCTTCACCCGGACGAAAAGAAAGCTCTTGAAGATATAGCTAAATCACTTGGTAAGAAGGATTGGAACTTCGACATAGATCCATGCAGCAACAAACCTAACTGGTTTACGCCTCCCATAACTCCCAAAACCAAAGTTGTAGAAAATAATGTCACCTGTGACTGCTCTGTTCCTGGTGACAACTTCTGCCATGTTATTGCAATAACTTTGAAAGGCCAAAATCTCCCCGGCACTCTCCCGCCAGGACTGACCAGGTTGCGTTACCTTCAAATTATTAACCTCTCTCGCAACTACTTGAATGGTACAATTCCGAGACAATGGGGCTCCATGATGAATATCAGTAAAATTGCTCTTCCCGGAAACCGATTAACGGGTTCAATACCAGCTGAGATTTCAAACATATCTACTCTCCAAATTTTGGAATTACATAACAATCAATTGTCTGGAAAGCTTCCTCCTGAGCTTGGGCATCTAACCCAAATTCAAACGCTGCGACTTTCCTCTAACTTTTTTACTGGAGAGCTACCTATGACATTCGTCAAGCTCACTTCATTACAAGAATTCCGAATTGAGGACAATCAATTCTCTGGAAAGATACCTGATTATATTCAGAACTGGACAAGTATTAATAAGCTAATGATTCAAGGAAGTGGATTAAGTGGGCCTATTCCTTCTGGAATTTCACTTTTGAGAAAATTAACAGACTTGAGAATTAGTGATTTGGATGGATCTGAAGTACCTTTGCCACAACTTAATAGTATGACAAATTTAAATACTCTGGTTCTAAGGAACTGCAACATCAGTGGAGAACTGCCTGATTATCTTGGGACTATGACATTATTAAAACACTTGGACCTCAGCTTTAACAAGTTAAGTGGAAAAATTTCAAGTACCTATACTACCATGAAAAGTTCAAATTTCATATTTTTAACTGGAAATCTTCTCACTGGCCCCGTGCATCGTTGGAGACAATATGTTGACACAGATCTTTCATACAATAACTTCAGCATCAGCCAAGTGAATCAAAGATGTCACAATGACAAATTGAACTTGTTTTCTACCTCATGGGCACACAATGACATAGCAACAGTTTCGTGTTTGAGATTTGAATGTCCCAAACCCTCCCACTCCCTTTATATAAATTGTGGTGGAAAGCATGCAACAGTCAACAAAACAAGTTATGACGAAGATTCAGACTTACCTGGACCAGCTAGATTCCATGTCAGTTCAAAAAGAAATTGGGCATTTAGCACCACTGGTGAATTCTTAGAAAGTAATGAACTTCCGTTAAATTATTCCCCTCAAAATATAGCTAAACTTACTATGGTGGATGCTGAATTGTACATGAATGCACGTGTTTCTCCTATTTCTTTGACATATTATGGGTTTTGCCTGGCAAATGGAAGCTACACGGTAAATCTACATTTTGCTGAAATAATGTTCACAGAAGATCAAACTTATGCTAGTCTTGGAAGGCGTGTATTTGATATCTACCTCCAGGGGAAGGCAGTGCAAAAGGACTTCAATATTGCCAAAGAAGCAGGAGGAGTTGGTAAGAAAATCATAAAACAGTTCAATGATGTTGTTGTTTCTAGTAATACTTTGGAGATCCGTTTATATTGGGCTGGAAAAGGAACACAGTCTCTGCCAAATAAATCAATATATGGTCCTCTTATATCGGCTATATCAGTGGAATCTGATTCTCCACCTGGAAGAATATCTGTAAGAGCTTTGGTTGGAATTGTGGTTGCAGCAACAATTATTATCATTCTTGTATTCGGTATACTTTGGTGGAAAGGATGTTTTGTAAAGAAAAACTCATTGGCAAGAGAACTGAAGAGTTTAGACCTACCAACGGGTTTATTTACCTTAAGGCAAATCAAAGCAGCAACAAACAACTTTGATAATTCCAATAAGATTGGAGCAGGAGGATTTGGTCCTGTCTACAAGGGATGTTTATCCAACGGGACACTGATTGCAGTCAAGCAACTTTCTTCTAAATCAAGGCAGGGAAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCATTGCAACACCCTTATCTTGTTAAACTCTATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGATATATGAATACTTGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGTCCAGAGGAAGAACAAATAAAATTAGACTGGTCTATACGGCAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGACATACCTACATGAAGAGTCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCTACTAATGTGTTGCTTGACAAGGATCTCGACCCTAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAGGAGGATAATACTCACATTAGCACTAGAATTGCTGGGACATATGGATATATGGCTCCTGAATATGCATTGCATGGTTATTTGACCGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATCGTTAGTGGAAGGAGCAACACCCTTTATCGGACAAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATATGTTGAAAGAGAGAGGCGACCTAATGGAGCTAGTAGACAGAAGATTAGGTTCAGATTTCAACAAAAAGGAAGCTATGGTGATGATCAATGTGGCTCTCCTATGCACGAATGTCACTTCAAACCTTAGGCCCTCCATGTCGTCGGTGGTAAGTATGCTTGAAGGAAGGATTGTGGTTCCAGAGTTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGCAATGAGGCAGTATTACTATCATACGGAAGAAAATAAGATAAGCAAGTCACCATCACAAATTCAGAGTTTATTAAATGATGGGTCATGGACTGCTACTTCTTCATCAGGTGTAGACCTTTATTCTGTCCACCCTGATTCTTCCTATTGGGAGAAAAGAAATTAA 3033 0.391 MKMSTTSPLFSLLIIAILFLSLTAFGANTLHPDEKKALEDIAKSLGKKDWNFDIDPCSNKPNWFTPPITPKTKVVENNVTCDCSVPGDNFCHVIAITLKGQNLPGTLPPGLTRLRYLQIINLSRNYLNGTIPRQWGSMMNISKIALPGNRLTGSIPAEISNISTLQILELHNNQLSGKLPPELGHLTQIQTLRLSSNFFTGELPMTFVKLTSLQEFRIEDNQFSGKIPDYIQNWTSINKLMIQGSGLSGPIPSGISLLRKLTDLRISDLDGSEVPLPQLNSMTNLNTLVLRNCNISGELPDYLGTMTLLKHLDLSFNKLSGKISSTYTTMKSSNFIFLTGNLLTGPVHRWRQYVDTDLSYNNFSISQVNQRCHNDKLNLFSTSWAHNDIATVSCLRFECPKPSHSLYINCGGKHATVNKTSYDEDSDLPGPARFHVSSKRNWAFSTTGEFLESNELPLNYSPQNIAKLTMVDAELYMNARVSPISLTYYGFCLANGSYTVNLHFAEIMFTEDQTYASLGRRVFDIYLQGKAVQKDFNIAKEAGGVGKKIIKQFNDVVVSSNTLEIRLYWAGKGTQSLPNKSIYGPLISAISVESDSPPGRISVRALVGIVVAATIIIILVFGILWWKGCFVKKNSLARELKSLDLPTGLFTLRQIKAATNNFDNSNKIGAGGFGPVYKGCLSNGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEEQIKLDWSIRQKICVGIARGLTYLHEESRLKVVHRDIKATNVLLDKDLDPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYALHGYLTDKADVYSFGVVALEIVSGRSNTLYRTKEEAFYLLDWAHMLKERGDLMELVDRRLGSDFNKKEAMVMINVALLCTNVTSNLRPSMSSVVSMLEGRIVVPEFVSDSSEVMDEKKMEAMRQYYYHTEENKISKSPSQIQSLLNDGSWTATSSSGVDLYSVHPDSSYWEKRN 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00032 1010 Gene3D - 404 595 - -
Vivi255g00032 1010 Pfam Protein tyrosine and serine/threonine kinase 665 933 IPR001245 GO:0004672|GO:0006468
Vivi255g00032 1010 Gene3D Phosphorylase Kinase; domain 1 629 737 - -
Vivi255g00032 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 966 - -
Vivi255g00032 1010 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 270 - -
Vivi255g00032 1010 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Vivi255g00032 1010 ProSiteProfiles Protein kinase domain profile. 662 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00032 1010 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00032 1010 SUPERFAMILY L domain-like 75 347 - -
Vivi255g00032 1010 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 36 203 - -
Vivi255g00032 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 595 - -
Vivi255g00032 1010 Pfam Malectin domain 406 590 IPR021720 -
Vivi255g00032 1010 CDD STKc_IRAK 668 935 - -
Vivi255g00032 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Vivi255g00032 1010 Gene3D Ribonuclease Inhibitor 206 270 IPR032675 -
Vivi255g00032 1010 Gene3D Ribonuclease Inhibitor 271 378 IPR032675 -
Vivi255g00032 1010 Gene3D Ribonuclease Inhibitor 33 205 IPR032675 -
Vivi255g00032 1010 SUPERFAMILY Protein kinase-like (PK-like) 645 949 IPR011009 -
Vivi255g00032 1010 Gene3D Transferase(Phosphotransferase) domain 1 738 944 - -
Vivi255g00032 1010 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 631 737 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00032 29 979 Receptor kinase-like Gene Family AT1G53420 53.846 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00032 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00032 - - gmx:732563 1286.94