Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00031 ATGAAGATGAGCACTACCTCTCCACTTTTCTCCCTTTTAATCATTGCCATTTTGTTCTTATCTCTAACAGCTTTTGGGGCTAATACTCTTCACCCGGACGAAAAGAAAGCTCTTGAAGATATAGCTAAATCACTTGGTAAGAAGGATTGGAACTTCGACATAGATCCATGCAGCAACAAACCTAACTGGTTTACGCCTCCCATAACTCCCAAAACCAAAGTTGTAGAAAATAATGTCACCTGTGACTGCTCTGTTCCTGGTGACAACTTCTGCCATGTTATTGCAATAACTTTGAAAGGCCAAAATCTCCCCGGCACTCTCCCGCCAGGACTGACCAGGTTGCGTTACCTTCAAATTATTAACCTCTCTCGCAACTACTTGAATGGTACAATTCCGAGACAATGGGGCTCCATGATGAATATCAGTAAAATTGCTCTTCCCGGAAACCGATTAACGGGTTCAATACCAGCTGAGATTTCAAACATATCTACTCTCCAAATTTTGGAATTACATAACAATCAATTGTCTGGAAAGCTTCCTCCTGAGCTTGGGCATCTAACCCAAATTCAAACGCTGCGACTTTCCTCTAACTTTTTTACTGGAGAGCTACCTATGACATTCGTCAAGCTCACTTCATTACAAGAATTCCGAATTGAGGACAATCAATTCTCTGGAAAGATACCTGATTATATTCAGAACTGGACAAGTATTAATAAGCTAATGATTCAAGGAAGTGGATTAAGTGGGCCTATTCCTTCTGGAATTTCACTTTTGAGAAAATTAACAGACTTGAGAATTAGTGATTTGGATGGATCTGAAGTACCTTTGCCACAACTTAATAGTATGACAAATTTAAATACTCTGGTTCTAAGGAACTGCAACATCAGTGGAGAACTGCCTGATTATCTTGGGACTATGACATTATTAAAACACTTATTTTTAACTGGAAATCTTCTCACTGGCCCCGTGCATCGTTGGAGACAATATGTTGACACAGATCTTTCATACAATAACTTCAGCATCAGCCAAGTGAATCAAAGATGTCACAATGACAAATTGAACTTGTTTTCTACCTCATGGGCACACAATGACATAGCAACAGTTTCGTGTTTGAGATTTGAATGTCCCAAACCCTCCCACTCCCTTTATATAAATTGTGGTGGAAAGCATGCAACAGTCAACAAAACAAGTTATGACGAAGATTCAGACTTACCTGGACCAGCTAGATTCCATGTCAGTTCAAAAAGAAATTGGGCATTTAGCACCACTGGTGAATTCTTAGAAAGTAATGAACTTCCGTTAAATTATTCCCCTCAAAATATAGCTAAACTTACTATGGTGGATGCTGAATTGTACATGAATGCACGTGTTTCTCCTATTTCTTTGACATATTATGGGTTTTGCCTGGCAAATGGAAGCTACACGGTAAATCTACATTTTGCTGAAATAATGTTCACAGAAGATCAAACTTATGCTAGTCTTGGAAGGCGTGTATTTGATATCTACCTCCAGGGGAAGGCAGTGCAAAAGGACTTCAATATTGCCAAAGAAGCAGGAGGAGTTGGTAAGAAAATCATAAAACAGTTCAATGATGTTGTTGTTTCTAGTAATACTTTGGAGATCCGTTTATATTGGGCTGGAAAAGGAACACAGTCTCTGCCAAATAAATCAATATATGGTCCTCTTATATCGGCTATATCAGTGGAATCTGATTCTCCACCTGGAAGAATATCTGTAAGAGCTTTGGTTGGAATTGTGGTTGCAGCAACAATTATTATCATTCTTGTATTCGGTATACTTTGGTGGAAAGGATGTTTTGTAAAGAAAAACTCATTGGCAAGAGAACTGAAGAGTTTAGACCTACCAACGGGTTTATTTACCTTAAGGCAAATCAAAGCAGCAACAAACAACTTTGATAATTCCAATAAGATTGGAGCAGGAGGATTTGGTCCTGTCTACAAGGGATGTTTATCCAACGGGACACTGATTGCAGTCAAGCAACTTTCTTCTAAATCAAGGCAGGGAAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCATTGCAACACCCTTATCTTGTTAAACTCTATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGATATATGAATACTTGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGTCCAGAGGAAGAACAAATAAAATTAGACTGGTCTATACGGCAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGACATACCTACATGAAGAGTCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCTACTAATGTGTTGCTTGACAAGGATCTCGACCCTAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAGGAGGATAATACTCACATTAGCACTAGAATTGCTGGGACATATGGATATATGGCTCCTGAATATGCATTGCATGGTTATTTGACCGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATCGTTAGTGGAAGGAGCAACACCCTTTATCGGACAAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATATGTTGAAAGAGAGAGGCGACCTAATGGAGCTAGTAGACAGAAGATTAGGTTCAGATTTCAACAAAAAGGAAGCTATGGTGATGATCAATGTGGCTCTCCTATGCACGAATGTCACTTCAAACCTTAGGCCCTCCATGTCGTCGGTGGTAAGTATGCTTGAAGGAAGGATTGTGGTTCCAGAGTTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGCAATGAGGCAGTATTACTATCATACGGAAGAAAATAAGATAAGCAAGTCACCATCACAAATTCAGAGTTTATTAAATGATGGGTCATGGACTGCTACTTCTTCATCAGGTGTAGACCTTTATTCTGTCCACCCTGATTCTTCCTATTGGGAGAAAAGAAATTAA 2961 0.3928 MKMSTTSPLFSLLIIAILFLSLTAFGANTLHPDEKKALEDIAKSLGKKDWNFDIDPCSNKPNWFTPPITPKTKVVENNVTCDCSVPGDNFCHVIAITLKGQNLPGTLPPGLTRLRYLQIINLSRNYLNGTIPRQWGSMMNISKIALPGNRLTGSIPAEISNISTLQILELHNNQLSGKLPPELGHLTQIQTLRLSSNFFTGELPMTFVKLTSLQEFRIEDNQFSGKIPDYIQNWTSINKLMIQGSGLSGPIPSGISLLRKLTDLRISDLDGSEVPLPQLNSMTNLNTLVLRNCNISGELPDYLGTMTLLKHLFLTGNLLTGPVHRWRQYVDTDLSYNNFSISQVNQRCHNDKLNLFSTSWAHNDIATVSCLRFECPKPSHSLYINCGGKHATVNKTSYDEDSDLPGPARFHVSSKRNWAFSTTGEFLESNELPLNYSPQNIAKLTMVDAELYMNARVSPISLTYYGFCLANGSYTVNLHFAEIMFTEDQTYASLGRRVFDIYLQGKAVQKDFNIAKEAGGVGKKIIKQFNDVVVSSNTLEIRLYWAGKGTQSLPNKSIYGPLISAISVESDSPPGRISVRALVGIVVAATIIIILVFGILWWKGCFVKKNSLARELKSLDLPTGLFTLRQIKAATNNFDNSNKIGAGGFGPVYKGCLSNGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEEQIKLDWSIRQKICVGIARGLTYLHEESRLKVVHRDIKATNVLLDKDLDPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYALHGYLTDKADVYSFGVVALEIVSGRSNTLYRTKEEAFYLLDWAHMLKERGDLMELVDRRLGSDFNKKEAMVMINVALLCTNVTSNLRPSMSSVVSMLEGRIVVPEFVSDSSEVMDEKKMEAMRQYYYHTEENKISKSPSQIQSLLNDGSWTATSSSGVDLYSVHPDSSYWEKRN 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00031 986 CDD STKc_IRAK 644 911 - -
Vivi255g00031 986 Gene3D Ribonuclease Inhibitor 205 368 IPR032675 -
Vivi255g00031 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 760 772 IPR008271 GO:0004672|GO:0006468
Vivi255g00031 986 SMART serkin_6 638 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00031 986 Pfam Malectin domain 382 566 IPR021720 -
Vivi255g00031 986 Gene3D Transferase(Phosphotransferase) domain 1 714 920 - -
Vivi255g00031 986 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 270 - -
Vivi255g00031 986 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 942 - -
Vivi255g00031 986 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 379 571 - -
Vivi255g00031 986 FunFam Putative LRR receptor-like serine/threonine-protein kinase 714 921 - -
Vivi255g00031 986 Gene3D Ribonuclease Inhibitor 33 204 IPR032675 -
Vivi255g00031 986 ProSiteProfiles Protein kinase domain profile. 638 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00031 986 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 36 203 - -
Vivi255g00031 986 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 607 713 - -
Vivi255g00031 986 Gene3D Phosphorylase Kinase; domain 1 605 713 - -
Vivi255g00031 986 Gene3D - 380 571 - -
Vivi255g00031 986 SUPERFAMILY Protein kinase-like (PK-like) 621 925 IPR011009 -
Vivi255g00031 986 SUPERFAMILY L domain-like 75 325 - -
Vivi255g00031 986 Pfam Protein tyrosine and serine/threonine kinase 641 909 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00031 29 955 Receptor kinase-like Gene Family AT1G53420 52.391 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00031 PK_Tyr_Ser-Thr 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00031 - - gmx:732563 1246.88