Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00029 ATGAAGATGAGCACTACCTCTCCATTTTTCTTCCTTTTAATCATTGCCATTTTGTTCTTATCTCTAACAGCTTTTGGGGCTAATACTCTTCACCCGGACGAAAAAAAAGCTCTTGAAGATATAGCTATATCACTTGGTAAGAAGGATTGGAACTTCAACATAGATCCATGCAGCAACAAACCTAACTGGCTTACATCTCCCATATCCAAAGGAGTAGAAAATAATGTCACCTGTGACTGCTCTATTCCTGGTGACAAATTCTGCCATGTTATTTCAATAACTTTGAAAGGGCAAAATCTTCCCGGTACTCTCCCGCCAGGACTGACCAGGTTGCGTTACCTTCAAGTCATTGACCTCTCTCGCAATTACTTGAATGGTACAATTCCTAAAGAATGGGGCTCCATGATGAATATCAGTAAAATTGCTCTTCTCGGAAACCGATTAACGGGTTCAATACCAGCTGAGATTTCAAACATATCTACTCTCCAAACTTTGGAATTACATAACAATCAATTGTCTGGAAAGCTTCCTCCTGAGCTTGGGCATCTAACCCAAATTCAAACACTGCAACTTTCCTCTAACAATTTTACCGGAGAGCTACCTATGACATTCGTCAAGCTCACTGCATTACAAGAATTCCGAATTGAGGACAATCAATTCTCTGGAAAGATACCTGATTATATTCAGAACTGGACAAATATTAATGCGCTAATGATTCAAGGAAGTGGATTAAGTGGGCCTATTCCTTCTGGAATTTCACTTTTGAGAAACTTAACTGACTTGAGAATTTGTGATTTGGATGGATATGAAGATGCACCTTTGCCACAACTTAATAGTATGACAAATTTAAATACTCTGGTTCTAAGGAACTGCAACATCAGTGGAGAACTGCCTGGTTATCTTGGGACTATGACATTATTAAAACACTTGGACCTCAGCTTTAACAAGTTAAGTGGAATAATTCCAGATTCCTATGCTAACATGAAGAGTTCGAATTACATATTTTTAACTGGAAATCTTCTCACTGGCCCCGTGCGTCGTTGGAGACATTATGTTGACACAGATCTCTCATACAATAATTTCAGCATCAGCCAAGTGAGTCAAAGATGTCAAGATGACAATGTGAACTTGTTTTCTACCTCATGGGCACACAATGACATAGAAACAGTTTCGTGTTTGAGATTTGAATGTCCCAAACCCTCATACTCCCTTTATATAAATTGTGGCGGAAAGCATGCAACAATCAACAAAACAAGTTATGACGAAGATTCGGACTTATCTAGCCCAGCTAGATTCCATGTCAGTTCAAATGGAAATTGGGCATTTAGCACCACTGGTGAATTCTTAGATAGTCCTGAGGAAAATTATTCCCCTAAAAATATAGCTAAACTTACTATGGTGGATGCTGAATTGTACATGAATGCACGTGTTTCTCCTATTTCTTTGACTTATTATGGGTTTTGCCTGGCAAATGGAAACTACACAGTAAATCTACATTTTGCTGAAATAATGTTCACAGAAGATCAAACTTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGGAAGGCCGTGCAAAAGGACTTCAATATTGCCAAAGAAGCAGGAGGAGTTGACTCTCCACCTGGAACTGGAAGCATATCTGCAGGAGCTGTGGCTGGAATTGTGGTTGCAGCAACAATTGTTATCATTCTTGTATTTGGTATACTTTGGTGGAAAGGATGTTTTGTAAAGAAAAACTCATTGGCAAGAGAGCTGAAGAGTTTAGACCTACCAACAGGTTTATTTACCTTAAGGCAAATCAAAGCAGCAACAAACAACTTTGATGATTCCAATAAGATTGGAGCAGGAGGATTTGGTCCTGTCTACAAGGGATGTTTATCCAACGGGACATTGATTGCAGTCAAGCAACTTTCTTCTAAATCAAGGCAGGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCCTTGCAACACCCTTATCTTGTTAAACTATATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGTTGATATATGAATACTTGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGTCCAGAGAAAGAACAAATAAAATTAGATTGGTCTATACGGCAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGACATACCTACATGAAGAGTCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCCACTAATGTGTTGCTTGACAAGGATCTCGACCCTAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAGGAGGATAATACTCACATTAGCACTAGAATTGCTGGGACATATGGATATATGGCTCCTGAATATGCATTGCATGGTTATTTGACGGACAAAGCTGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATCGTTAGTGGAAGGAGCAACACCCTTTATCGGACAAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATATGTTGAAAGAGAGAGGCGACCTAATGGAGCTAGTAGACAGAAGATTAGGTTCAGATTTCAACAAAAAGGAAGCTATGGTGATGATCAATGTGGCTCTCCTATGCACGAATGTCACTTCAAACCTTAGGCCCTCCATGTCGTCGGTGGTAAGTATGCTTGAAGGAAGGATTGTGGTTCCAGAGTTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGCAATGAGGCAGTATTACTATCATACGGAAGAAAATAAGATAAGCAAGTCACCATCACAAATTCAGAGTTTATTAAATGATGGGTCATGGACTGCTACATCTTCGACAGGTGAAGACCTTTATTCTGTCCACCCTGATTCTTCCTATTGGGAGAAAAGAAATTAA 2880 0.3944 MKMSTTSPFFFLLIIAILFLSLTAFGANTLHPDEKKALEDIAISLGKKDWNFNIDPCSNKPNWLTSPISKGVENNVTCDCSIPGDKFCHVISITLKGQNLPGTLPPGLTRLRYLQVIDLSRNYLNGTIPKEWGSMMNISKIALLGNRLTGSIPAEISNISTLQTLELHNNQLSGKLPPELGHLTQIQTLQLSSNNFTGELPMTFVKLTALQEFRIEDNQFSGKIPDYIQNWTNINALMIQGSGLSGPIPSGISLLRNLTDLRICDLDGYEDAPLPQLNSMTNLNTLVLRNCNISGELPGYLGTMTLLKHLDLSFNKLSGIIPDSYANMKSSNYIFLTGNLLTGPVRRWRHYVDTDLSYNNFSISQVSQRCQDDNVNLFSTSWAHNDIETVSCLRFECPKPSYSLYINCGGKHATINKTSYDEDSDLSSPARFHVSSNGNWAFSTTGEFLDSPEENYSPKNIAKLTMVDAELYMNARVSPISLTYYGFCLANGNYTVNLHFAEIMFTEDQTYGSLGRRVFDIYLQGKAVQKDFNIAKEAGGVDSPPGTGSISAGAVAGIVVAATIVIILVFGILWWKGCFVKKNSLARELKSLDLPTGLFTLRQIKAATNNFDDSNKIGAGGFGPVYKGCLSNGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEKEQIKLDWSIRQKICVGIARGLTYLHEESRLKVVHRDIKATNVLLDKDLDPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYALHGYLTDKADVYSFGVVALEIVSGRSNTLYRTKEEAFYLLDWAHMLKERGDLMELVDRRLGSDFNKKEAMVMINVALLCTNVTSNLRPSMSSVVSMLEGRIVVPEFVSDSSEVMDEKKMEAMRQYYYHTEENKISKSPSQIQSLLNDGSWTATSSTGEDLYSVHPDSSYWEKRN 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00029 959 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 201 267 - -
Vivi255g00029 959 SUPERFAMILY L domain-like 74 345 - -
Vivi255g00029 959 Pfam Protein tyrosine and serine/threonine kinase 615 882 IPR001245 GO:0004672|GO:0006468
Vivi255g00029 959 SMART serkin_6 611 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00029 959 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 36 200 - -
Vivi255g00029 959 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 580 686 - -
Vivi255g00029 959 Gene3D Ribonuclease Inhibitor 267 386 IPR032675 -
Vivi255g00029 959 Gene3D Phosphorylase Kinase; domain 1 578 686 - -
Vivi255g00029 959 ProSiteProfiles Protein kinase domain profile. 611 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00029 959 Gene3D - 401 560 - -
Vivi255g00029 959 CDD STKc_IRAK 617 884 - -
Vivi255g00029 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Vivi255g00029 959 FunFam Putative LRR receptor-like serine/threonine-protein kinase 687 894 - -
Vivi255g00029 959 SUPERFAMILY Protein kinase-like (PK-like) 594 899 IPR011009 -
Vivi255g00029 959 Pfam Leucine rich repeat 281 341 IPR001611 GO:0005515
Vivi255g00029 959 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 915 - -
Vivi255g00029 959 Pfam Malectin domain 403 542 IPR021720 -
Vivi255g00029 959 Gene3D Transferase(Phosphotransferase) domain 1 687 893 - -
Vivi255g00029 959 Gene3D Ribonuclease Inhibitor 34 201 IPR032675 -
Vivi255g00029 959 Gene3D Ribonuclease Inhibitor 202 266 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00029 29 928 Receptor kinase-like Gene Family AT1G53420 52.292 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00029 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00029 - - gmx:732563 1211.82