Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00028 ATGTCTGGAAATATTCCTTCTGAGCTTGGGAGTCTAACCCATATTCAAGCACTGCAACTTTCGTCTAACAATTTTACTCGAGAACTACCCGTAACATTGGCCAAGCTAAGTACACTGCTAGATTTCCGAATTTCAGACAACCAGTTGTCCGGAAAGATACCTGATTTTATTCAAAATTGGACAAATATCAGTACACTAATCATTCAAGGGAGTGGATTAAGTGGGCCGATTCCTTCCGAAATATCACTTTTGAGAAACTTAATTGAATTGAGAATTAGTGATTTGAATGGATCCGAATATGCACCCTTGCCACAACTTAGCAATATGATATCGTTAAACAGACTGGTTATGAGGAATTGCAACATCAATGGAAACCTACCCGAATCTATTGAGAATATGACAGCATTGAAACACTTAGATCTCAGCTTTAACAAATTAAATGGAACGATTCCGGATAGCTATGCTGACATGGACAGTTTGAATTTCGTGTTTTTAACTGGAAACCTTCTCACTGGACAAGTGCCTTCTCCTTGGGGAAAGAATGCATATGTAGATCTTTCATACAATAACTTCACCATCAATCAAGAGAGTCAGATATGTCAAAATGAAAGAGTGAACTTATTTTCTACTTCATGGGCACGCAATGACATAGGAACAAATTCGTGTTTGCGCTTTGAATGTCCCGAACACTTTTACTCCCTTCATATAAATTGTGGGGGAAATCAAGAAAAAGTCAACGGAACAAATTATGAAGATGATCAAGATTCATCTGGACCTGCCAGATTCGATGGCAAGGACAGTCCAACAGCAAAGTGGGCATTTAGCAGCACTGGCAAATTCATTGATAGTGGAACATTTGGAAACACTTATACTCCGGCAAATATCTCTAAACTTACTATGGTGGATGCTGAGTTGTACATGACTGCACGTGTTTCTCCTATTTCATTGACTTATTATGGGTTTTGCCTCGCAAATGGAAGCTACACAATAAATCTTCATTTTGCTGAAATAATATTCACAGACAATCAAACTTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTATCTTCAGGGAATGCGCGTGCAAAAAGACTTCAATATTGCCGAAGAAGCTGGGGGAGTTGGTAAGAAAGTCACAAAACAGTTCAAAGATGTTAATGTTTCTAGTAATACTTTGGAGATCCGATTGTATTGGGCTGGAAAAGGGACACAGTATCTCCCAGATAAATCCGTATATGGTCCTCTTATATCAGCTATATCAGTGGAATCTGACTCTCCACCTAGAAGCCCTAGAACCCATAGAAGCAAACCTGCTGGAGCTGTGGTTGGAAGTGTGGTTGCAGCAACAATTATTATCATTCTAGTATTCGGTATACTCTGGCGGAAAGGATGTTTTGGAAAGAAAAACTCTTTAGCAAAAGCAGAGCTGAAGAGTTTAGACCTTCAAACGGATCTATTTACCTTAAGACACATCAAATCAGCTACAAATAACTTTGATATTTCAAATAAGATTGGAGAAGGAGGATTTGGTCCAGTGTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTCAAACAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTCTAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAAACTCTATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGATTTATGAATACTTGGAAAACAATAGTCTTGCCCGTGCTTTATTTGGTCCCGAGGAACACCAAATAAAACTAGATTGGTCAACTAGGAAGAAGATCTGTGTTGGTATTGCTAGTGGTTTGGCATTTCTTCATGAAGAATCAAGACTGAAGGTTGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAAACCAAAGATATCTGATTTTGGTTTAGCCAGGCTTGATGACGAGGACAATACTCACATTAGCACTAGAATTGCGGGGACATATGGTTACATGGCTCCTGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATCGTTAGTGGAAGGAGCAACACCCTTTATCGGTCACAGGAGGAAACATTCTATCTTCTTGATTGGGCACATTTGATGAAAGAGAAAGGTGACTTAATGGAGCTAGTTGATAGAAGATTAGGATCAGATTTCAACAAAAAGGAAGCTATGGTGATGATCAATGTGGCTCTCCTATGCACGAATGTCACGTCAAACCTTAGGCCCTCCATGTCGTCGGTGGTAAGTATGCTCAAAGGTAGGACCGTGGTTCCAGAATTCGTTGCAGATTCAAGTGAAGTATTGGATGAAAAGAAGTTTGAAGTAATGAGGAAGTATTATTATCAGATTGAAGAAAATGAGAAAAGTAAGTCACAAACACAAAGTCAGAGTTTATCAATTGATGGGCCATGGACGGCTGCATCTTCATCGGCTGTAGACCTTTATCCAGTCCACCTTGATTCCTCCTATTGGGAGGAAAGAAATTAA 2544 0.3939 MSGNIPSELGSLTHIQALQLSSNNFTRELPVTLAKLSTLLDFRISDNQLSGKIPDFIQNWTNISTLIIQGSGLSGPIPSEISLLRNLIELRISDLNGSEYAPLPQLSNMISLNRLVMRNCNINGNLPESIENMTALKHLDLSFNKLNGTIPDSYADMDSLNFVFLTGNLLTGQVPSPWGKNAYVDLSYNNFTINQESQICQNERVNLFSTSWARNDIGTNSCLRFECPEHFYSLHINCGGNQEKVNGTNYEDDQDSSGPARFDGKDSPTAKWAFSSTGKFIDSGTFGNTYTPANISKLTMVDAELYMTARVSPISLTYYGFCLANGSYTINLHFAEIIFTDNQTYGSLGRRVFDIYLQGMRVQKDFNIAEEAGGVGKKVTKQFKDVNVSSNTLEIRLYWAGKGTQYLPDKSVYGPLISAISVESDSPPRSPRTHRSKPAGAVVGSVVAATIIIILVFGILWRKGCFGKKNSLAKAELKSLDLQTDLFTLRHIKSATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIKLDWSTRKKICVGIASGLAFLHEESRLKVVHRDIKATNVLLDKDLKPKISDFGLARLDDEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVSGRSNTLYRSQEETFYLLDWAHLMKEKGDLMELVDRRLGSDFNKKEAMVMINVALLCTNVTSNLRPSMSSVVSMLKGRTVVPEFVADSSEVLDEKKFEVMRKYYYQIEENEKSKSQTQSQSLSIDGPWTAASSSAVDLYPVHLDSSYWEERN 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00028 847 SUPERFAMILY L domain-like 3 192 - -
Vivi255g00028 847 Pfam Malectin domain 233 420 IPR021720 -
Vivi255g00028 847 Gene3D Ribonuclease Inhibitor 1 101 IPR032675 -
Vivi255g00028 847 SUPERFAMILY Protein kinase-like (PK-like) 483 780 IPR011009 -
Vivi255g00028 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vivi255g00028 847 Gene3D Transferase(Phosphotransferase) domain 1 575 782 - -
Vivi255g00028 847 Gene3D - 231 425 - -
Vivi255g00028 847 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00028 847 Pfam Protein tyrosine and serine/threonine kinase 501 770 IPR001245 GO:0004672|GO:0006468
Vivi255g00028 847 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 29 96 - -
Vivi255g00028 847 FunFam Putative LRR receptor-like serine/threonine-protein kinase 575 782 - -
Vivi255g00028 847 Gene3D Phosphorylase Kinase; domain 1 465 574 - -
Vivi255g00028 847 CDD STKc_IRAK 505 772 - -
Vivi255g00028 847 ProSiteProfiles Protein kinase domain profile. 499 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00028 847 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 468 574 - -
Vivi255g00028 847 Gene3D Ribonuclease Inhibitor 102 222 IPR032675 -
Vivi255g00028 847 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 231 425 - -
Vivi255g00028 847 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 809 - -
Vivi255g00028 847 MobiDBLite consensus disorder prediction 247 266 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00028 1 802 Receptor kinase-like Gene Family AT1G53420 56.420 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00028 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00028 - - cam:101501658 1111.29