Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00025 ATGAACACTTCCTCGCAGTGTATCTTCCTTTCACTCATTGCCATTTGGCTCATATCTATATCAGCTTTTGGAGCTACTACGATTCACCCCGATGAAAAGAAAGCTCTTCAAGATATAGCTAACTCACTTGGTAAGAAGGATTGGAATTTCAACACAGATCCATGCAGCAACTGGGTTACAAAGTTAGAGAACAATGTCACCTGTAACTGCTCTGTAGCTGGTGACAACTTCTGCCATGTTGTTACAATAATTTTGAACAAGCAAAATCTCCCGGGCACTCTCCCACCAGAACTGAACAGGCTGCGTTACCTTCAAATTATTGATCTCTCTCGCAATTACTTGAACGGTACAATTCCTAAAGAATGGGGCTCCATGACGAATCTTCTTAACATTATTCTCTCCGGAAATCGATTAACCGGTTCAATACCAAAGGAGATTGCTAATATATCTACTCTGATACAATTGAACTTGACAGGCAATCAAATGTCTGGAAATATTCCTTCTGAGCTTGGGAGTCTAACCCATATTCAAGCACTCCGAATTTCAGACAACCAGTTGTCCGGAAAGATACCTGATTTTATTCAAAATTGGACAAATATCAGTACACTAATCATTCAAGGGAGTGGATTAAGTGGGCCGATTCCTTCCGAAATATCACTTTTGAGAAACTTAATTGAATTGAGAATTAGTGATTTGAATGGATCCGAATATGCACCCTTGCCACAACTTAGCAATATGATATCGTTAAACAGACTGGTTATGAGGAATTGCAACATCAATGGAAACCTACCCGAATCTATTGAGAATATGACAGCATTGAAACACTTAGATCTCAGCTTTAACAAATTAAATGGAACGATTCCGGATAGCTATGCTGACATGGACAGTTTGAATTTCGTGTTTTTAACTGGAAACCTTCTCACTGGACAAGTGCCTTCTCCTTGGGGAAAGAATGCATATGTAGATCTTTCATACAATAACTTCACCATCAATCAAGAGAGTCAGATATGTCAAAATGAAAGAGTGAACTTATTTTCTACTTCATGGGCACGCAATGACATAGGAACAAATTCGTGTTTGCGCTTTGAATGTCCCGAACACTTTTACTCCCTTCATATAAATTGTGGGGGAAATCAAGAAAAAGTCAACGGAACAAATTATGAAGATGATCAAGATTCATCTGGACCTGCCAGATTCGATGGCAAGGACAGTCCAACAGCAAAGTGGGCATTTAGCAGCACTGGCAAATTCATTGATAGTGGAACATTTGGAAACACTTATACTCCGGCAAATATCTCTAAACTTACTATGGTGGATGCTGAGTTGTACATGACTGCACGTGTTTCTCCTATTTCATTGACTTATTATGGGTTTTGCCTCGCAAATGGAAGCTACACAATAAATCTTCATTTTGCTGAAATAATATTCACAGACAATCAAACTTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTATCTTCAGGGAATGCGCGTGCAAAAAGACTTCAATATTGCCGAAGAAGCTGGGGGAGTTGGTAAGAAAGTCACAAAACAGTTCAAAGATGTTAATGTTTCTAGTAATACTTTGGAGATCCGATTGTATTGGGCTGGAAAAGGGACACAGTATCTCCCAGATAAATCCGTATATGGTCCTCTTATATCAGCTATATCAGTGGAATCTGACTCTCCACCTAGAAGCCCTAGAACCCATAGAAGCAAACCTGCTGGAGCTGTGGTTGGAAGTGTGGTTGCAGCAACAATTATTATCATTCTAGTATTCGGTATACTCTGGCGGAAAGGATGTTTTGGAAAGAAAAACTCTTTAGCAAAAGCAGAGCTGAAGAGTTTAGACCTTCAAACGGATCTATTTACCTTAAGACACATCAAATCAGCTACAAATAACTTTGATATTTCAAATAAGATTGGAGAAGGAGGATTTGGTCCAGTGTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTCAAACAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTCTAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAAACTCTATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGATTTATGAATACTTGGAAAACAATAGTCTTGCCCGTGCTTTATTTGGTCCCGAGGAACACCAAATAAAACTAGATTGGTCAACTAGGAAGAAGATCTGTGTTGGTATTGCTAGTGGTTTGGCATTTCTTCATGAAGAATCAAGACTGAAGGTTGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAAACCAAAGATATCTGATTTTGGTTTAGCCAGGCTTGATGACGAGGACAATACTCACATTAGCACTAGAATTGCGGGGACATATGGTTACATGGCTCCTGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATCGTTAGTGGAAGGAGCAACACCCTTTATCGGTCACAGGAGGAAACATTCTATCTTCTTGATTGGGCACATTTGATGAAAGAGAAAGGTGACTTAATGGAGCTAGTTGATAGAAGATTAGGATCAGATTTCAACAAAAAGGAAGCTATGGTGATGATCAATGTGGCTCTCCTATGCACGAATGTCACGTCAAACCTTAGGCCCTCCATGTCGTCGGTGGTAAGTATGCTCAAAGGTAGGACCGTGGTTCCAGAATTCGTTGCAGATTCAAGTGAAGTATTGGATGAAAAGAAGTTTGAAGTAATGAGGAAGTATTATTATCAGATTGAAGAAAATGAGAAAAGTAAGTCACAAACACAAAGTCAGAGTTTATCAATTGATGGGCCATGGACGGCTGCATCTTCATCGGCTGTAGACCTTTATCCAGTCCACCTTGATTCCTCCTATTGGGAGGAAAGAAATTAA 2955 0.3956 MNTSSQCIFLSLIAIWLISISAFGATTIHPDEKKALQDIANSLGKKDWNFNTDPCSNWVTKLENNVTCNCSVAGDNFCHVVTIILNKQNLPGTLPPELNRLRYLQIIDLSRNYLNGTIPKEWGSMTNLLNIILSGNRLTGSIPKEIANISTLIQLNLTGNQMSGNIPSELGSLTHIQALRISDNQLSGKIPDFIQNWTNISTLIIQGSGLSGPIPSEISLLRNLIELRISDLNGSEYAPLPQLSNMISLNRLVMRNCNINGNLPESIENMTALKHLDLSFNKLNGTIPDSYADMDSLNFVFLTGNLLTGQVPSPWGKNAYVDLSYNNFTINQESQICQNERVNLFSTSWARNDIGTNSCLRFECPEHFYSLHINCGGNQEKVNGTNYEDDQDSSGPARFDGKDSPTAKWAFSSTGKFIDSGTFGNTYTPANISKLTMVDAELYMTARVSPISLTYYGFCLANGSYTINLHFAEIIFTDNQTYGSLGRRVFDIYLQGMRVQKDFNIAEEAGGVGKKVTKQFKDVNVSSNTLEIRLYWAGKGTQYLPDKSVYGPLISAISVESDSPPRSPRTHRSKPAGAVVGSVVAATIIIILVFGILWRKGCFGKKNSLAKAELKSLDLQTDLFTLRHIKSATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIKLDWSTRKKICVGIASGLAFLHEESRLKVVHRDIKATNVLLDKDLKPKISDFGLARLDDEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVSGRSNTLYRSQEETFYLLDWAHLMKEKGDLMELVDRRLGSDFNKKEAMVMINVALLCTNVTSNLRPSMSSVVSMLKGRTVVPEFVADSSEVLDEKKFEVMRKYYYQIEENEKSKSQTQSQSLSIDGPWTAASSSAVDLYPVHLDSSYWEERN 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00025 984 FunFam Putative LRR receptor-like serine/threonine-protein kinase 712 919 - -
Vivi255g00025 984 SUPERFAMILY L domain-like 54 329 - -
Vivi255g00025 984 Gene3D Ribonuclease Inhibitor 235 359 IPR032675 -
Vivi255g00025 984 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 368 562 - -
Vivi255g00025 984 Pfam Protein tyrosine and serine/threonine kinase 638 907 IPR001245 GO:0004672|GO:0006468
Vivi255g00025 984 Gene3D Ribonuclease Inhibitor 31 150 IPR032675 -
Vivi255g00025 984 SMART serkin_6 636 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00025 984 Gene3D Ribonuclease Inhibitor 151 234 IPR032675 -
Vivi255g00025 984 Gene3D Phosphorylase Kinase; domain 1 602 711 - -
Vivi255g00025 984 MobiDBLite consensus disorder prediction 384 403 - -
Vivi255g00025 984 ProSiteProfiles Protein kinase domain profile. 636 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00025 984 CDD STKc_IRAK 642 909 - -
Vivi255g00025 984 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 75 166 - -
Vivi255g00025 984 SUPERFAMILY Protein kinase-like (PK-like) 620 917 IPR011009 -
Vivi255g00025 984 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 946 - -
Vivi255g00025 984 Gene3D Transferase(Phosphotransferase) domain 1 712 919 - -
Vivi255g00025 984 Gene3D - 368 562 - -
Vivi255g00025 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Vivi255g00025 984 Pfam Malectin domain 370 557 IPR021720 -
Vivi255g00025 984 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 605 711 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00025 25 939 Receptor kinase-like Gene Family AT1G53420 52.798 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00025 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00025 - - gmx:732563 1229.54