Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00019 ATGGGTGAGCCTCCCAATCGCAGATTGGATATCGTACAGAGCAATGTTTACTGTAACTGCTCTATTGCCGGTGACAATTTCTGCCATGTTATTTCAATAACTTTGAAAGGGCAAAATCTTCCTGGCACTCTCCCACCAAGACTGACCAGGTTGCGTTACCTTCAAACAATTGACCTCTCTCGCAATTATTTGCATGGTACAATTCCAAAACAATGGGGCTCCATGATGAATATTAGTAAAATTGCTCTTCCAGTAAACCGATTAACGGGTTCAATACCAGCTGAGATTGCAAACATATCTACTCTCCAAAATTTGGAGTTATGGAACAATCAGTTGTCAGGAAATCTTCCTCCTGAACTTGGGTATCTAACCCAAATTCAAACACTGCGAGTTTCCTCTAACAATTTTACTGGAGAACTACCTGTGACATTGGCCAAGCTCATTACATTGCTGGATTTCCGAATTGAGGACAATCAATTCTCTGGAAAGATACCTGATTATATTCAGAACTGGAAAAGTATACAAAAACTAATGATTCAAGGAAGTGGATTAAGTGGGCCGATTCCTTCTGGAATTTCACTCTTGACAAACTTAACTAACTTGAGAATTAGTGATTTGAATGGATCTGACTATGCACCTTTGCCACAACTTAATAATCTGACGTCATTAGAAAAACTGATTCTAAGGAATTGCAACATTAACGGGACGCTACCTAATTATCTTAGGAATATGACAACATTAAAGCATTTAGACCTCAGCTTTAACAACTTAAGTGGAATAATTCCTTCGACCTATGCTTACCTAAACAACTTGACATACATAATTTTAACTGGAAACCTTCTCACTGGATCAATGCCTCCTTGGTCAACAAAAGTCAACGTAGACCTTTCATACAATAACTTCAGCTTAAGCCAAGTGAGTCAGATATGTCAAAATGATAAAGTGAACTTGTTTTCTACCTCATGGGCACGCAATGACATAGGAACAACTTCGTGTTTGAGCTTTGAATGTCCCAAACCCTCAAACTCCCTTTATATAAATTGTGGTGGAAATCAAGCAAAAGTCAACAGAACAACCTATGATGGTGATTCAGATTCATCTGGACCAGCTAGATTCCATGCCAGTCCAACAGGAAAATGGGCATCTAGCACCACTGGTGCATTCATTGATAGTGATCAACTTGGAGCAACTTATTATTCCACAAAATATACCTCTACACTTACTATGGTGGATGCTGAATTGTACATGACTGCGCGCGTTTCTCCTATTTCTTTGACTTATTATGGATTTTGCCTGGAAAATGGAAGCTACACAGTAAATCTACATTTTGCTGAAATAATGATCAGAGATGATCAAACCTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGAAAGGCAGTGCAAAAGGACTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGAAAATTGTAAAACAGTTCAATGTTGTTGTTACTAGTAATACCTTGGAGATCCGATTGTATTGGGCTGGAAAAGGGACACAGTTTCTCCCTAATAGATCAGTATACGGTCCTCTTATATCAGCTATATCAGTTGAAACTGCAGACTCTCCACATGGAAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGTTGCAGCAACAGTTATTATCATTCTAGTATTTGGTACACTTTGGTGGAAAGGATGTTTTGGAAAGAAAAATTCATTAGCAAAAGAGCTGGAGAGTTTAGACCTACACACGGGTTTATTTACCTTAAGACAAATCAAAGCAGCCACAAATAACTTTGATCTTTCCAATAAGATTGGAGAAGGAGGGTTTGGTCCCGTGTACAAGGGATGTTTACCCAATGGGACATTAATAGCAGTAAAGCAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAGCATCCTTATCTTGTTAAACTCTATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGATATATGAATACTTGGAAAACAATAGTTTAGCTCGTGCTTTATTTGGTCCAGAAGAACATCAAATAAGATTAGATTGGTCAACTAGGAAGAAGATCTGTGTTGGTATTGCTAGAGGATTGGCATACCTTCATGAAGAATCAAGACTGAAGGTTGTTCACAGGGACATCAAAGCAACTAATGTGTTGCTTGATAAAGATCTTGACCCAAAGATATCTGATTTTGGTTTGGCCAGACTTGATGAGGAGGAGAACACTCACATTAGCACTAGAATTGCTGGGACCTACGGATATATGGCTCCTGAGTACGCAATGCATGGTTATTTGACGGACAAAGCAGACGTTTATAGTTTTGGAATTGTTGTCTTGGAAATCATTAGTGGAAAGAACAACACCCTCTATCGGTCAAAGGAGGAGGCATTCTATCTTCTTGATTGGGCACATTTGTTGAAGGAGAGGGGTGACCTAATGGAGCTAGTTGATAGAAGATTAGGAGCAGATTTCAACAAAAAGGAAGCTATGGTGGTAATAAATGTGGCTCTCCTATGCACGAATGTAACTTCAAACCTTAGGCCCTCCATGTCGTCGGTGGTAAGTTACCTTGAAGGAAGGACTATGGTTCCAGAATTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGTAATGAGGAAGTATTACTATCAGATGGAAGAAAATACCTCACAAAGTCAGCGTATATTAAATGACGGGTCATGGACTGCTACATCTTCATCAGCTGTAGACCTTTATCCTGTTCACCTTGATTCTTCCTATTGGGAGGAAAGAAATTAA 2835 0.3919 MGEPPNRRLDIVQSNVYCNCSIAGDNFCHVISITLKGQNLPGTLPPRLTRLRYLQTIDLSRNYLHGTIPKQWGSMMNISKIALPVNRLTGSIPAEIANISTLQNLELWNNQLSGNLPPELGYLTQIQTLRVSSNNFTGELPVTLAKLITLLDFRIEDNQFSGKIPDYIQNWKSIQKLMIQGSGLSGPIPSGISLLTNLTNLRISDLNGSDYAPLPQLNNLTSLEKLILRNCNINGTLPNYLRNMTTLKHLDLSFNNLSGIIPSTYAYLNNLTYIILTGNLLTGSMPPWSTKVNVDLSYNNFSLSQVSQICQNDKVNLFSTSWARNDIGTTSCLSFECPKPSNSLYINCGGNQAKVNRTTYDGDSDSSGPARFHASPTGKWASSTTGAFIDSDQLGATYYSTKYTSTLTMVDAELYMTARVSPISLTYYGFCLENGSYTVNLHFAEIMIRDDQTYGSLGRRVFDIYLQGKAVQKDFNIAEEAGGVGKKIVKQFNVVVTSNTLEIRLYWAGKGTQFLPNRSVYGPLISAISVETADSPHGSISAGAVVGIVVAATVIIILVFGTLWWKGCFGKKNSLAKELESLDLHTGLFTLRQIKAATNNFDLSNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIRLDWSTRKKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLDPKISDFGLARLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEIISGKNNTLYRSKEEAFYLLDWAHLLKERGDLMELVDRRLGADFNKKEAMVVINVALLCTNVTSNLRPSMSSVVSYLEGRTMVPEFVSDSSEVMDEKKMEVMRKYYYQMEENTSQSQRILNDGSWTATSSSAVDLYPVHLDSSYWEERN 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00019 944 Gene3D Transferase(Phosphotransferase) domain 1 677 893 - -
Vivi255g00019 944 Gene3D Ribonuclease Inhibitor 142 209 IPR032675 -
Vivi255g00019 944 Gene3D Ribonuclease Inhibitor 5 141 IPR032675 -
Vivi255g00019 944 SUPERFAMILY Protein kinase-like (PK-like) 584 886 IPR011009 -
Vivi255g00019 944 Pfam Malectin domain 344 528 IPR021720 -
Vivi255g00019 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
Vivi255g00019 944 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 142 207 - -
Vivi255g00019 944 FunFam Nuclear pore complex protein NUP107 9 141 - -
Vivi255g00019 944 Gene3D Ribonuclease Inhibitor 210 326 IPR032675 -
Vivi255g00019 944 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 570 676 - -
Vivi255g00019 944 CDD STKc_IRAK 607 874 - -
Vivi255g00019 944 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 341 533 - -
Vivi255g00019 944 Gene3D Phosphorylase Kinase; domain 1 569 676 - -
Vivi255g00019 944 Pfam Protein kinase domain 603 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00019 944 ProSiteProfiles Protein kinase domain profile. 601 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00019 944 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Vivi255g00019 944 SMART serkin_6 601 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00019 944 Gene3D - 342 534 - -
Vivi255g00019 944 SUPERFAMILY L domain-like 9 306 - -
Vivi255g00019 944 FunFam Putative LRR receptor-like serine/threonine-protein kinase 677 884 - -
Vivi255g00019 944 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 910 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00019 18 915 Receptor kinase-like Gene Family AT1G53420 55.837 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00019 Pkinase 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00019 - - gmx:732563 1238.4