Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00015 ATGAACACTACTTCTCAGTTTCTCTTCCTTTCACTCATTGCCATATGGTTCATATCTCTAACAGCTTTTGGAGCTGATACTATTCACCCCGACGAAAAGAAAGCTCTTGAAGATATAGGTAAATCACTTGGTAAGAAGGATTGGAACTTCGACATAGATCCATGCAGCAACAAACCTAACTGGGCCACACCTCCCATATCCAAAGTCGTAGAAAATAATGTCACCTGTGACTGCTCTGTTGCTGGTGACGACTTCTGCCATGTTGTTTCAATAACTTTGAAAGGGCAAAATCTGCTTGGCACTCTCCCACCAGAACTGACCGGGTTGCATTACCTTCAAACTATTGACCTCTCTCGCAATTACTTGAATGGCACAATTCCAAAGGAATGGGGCTCCATGATGAATATTAGAAAAATTGCTCTCCCCGAAAATCGTCTATCGGGTTCAATACCAGCTGAGATTGCAAACATATCTACTCTCCAAATTTTGGAGTTATGGAATAATCAGTTGTCTGGAAATCTTCCTCCTGAGCTTGGGAGTCTAACCCAAATTCTAACACTGCGAATTTCCTCTAACAATTTTATTGGAGAACTACCTGGGACATTGACCAAGCTCACTACATTGCGAGATTTCCGAATTGAGGACAACCAATTCTCTGGAAAGATACCTGATTATATTCAGAACTGGATAAATATCAATACACTAGTGATTCAAGGAAGTGGATTAAGTGGGCCGATTCCTTCTGGAATTTCTCTTTTAAGAAACTTAACTGACTTGAGAATTAGTGATTTGAATGGATTTGAGTATGCACCTTTGCCAGAACTTAATAAAATGACTTCGTTAAAAACTTTGATTCTGAGGAACTGCAACATCAATGGAAAATTATATGATTATCTTGGGACTATTGCATCATTAAAAATATTGGACCTCAGTTTTAACAAATTAAGTGGAACAATTCCGAGATCCTATGCTGCCATGAACAGTTCGAATTACATATTTCTTACTGGAAACCTTCTCACTGGACCAGTACCTCCTACTTGGAGAAAGAATACCTACGTAGATCTTTCATACAATAACTTCAGCATCAGCCAGGAGAGTCAGATATGTCGAGATGACAATGTGAACTTGTTTTCTACCTCAAGGGCACATAATGATATGGGAACAGTTTCGTGTTTGAGCCTTAAATGTCCTAAACCCTCATACTCCCTTTATATAAATTGTGGTGGATATCAAGCAATAGTCAACCGAACAACTTATGATGGTGATTCAGACTCATCTGGACCAGCTAGATCCCATGCCACAGAAAATTGGGCATTTAGCAGCACTGGTCTATTCATTGAACATGATATACTTGGAAGAACTTTTACCCCACAAAATATCTCTAAACTTACTATGGAAGATGCTGAGTTGTACATGAATGCGCGTATTTCACCTATTTCTTTAACTTATTATGGGTTTTGCCTGGCAAGTGGAAGCTACACAGTAAATCTGCATTTTGCTGAAATAATGTTCACAGATGATCAAACTTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTATCTTCAGGGAAAGCAGGTGCAAAAGGACTTCAATATTGCACAAGAAGCAGGAGGAGTTGGTAAGAAAATCATAAAACAGTTCAAAGATGTTGTTGTTTCTAGTAATACTTTGGAGATCCGTTTATATTGGGCTGGAAAAGGGACACAGGCTGTCCCAAATAAATCAGTATATGGTCCTCTTATATCAGCTATCTCAGTGGAATCTGACTCTCCACCTGGAACTGGAAGCATATCTGCAGGAGCTGTGGCTGGAATTGTGATTGCTGCAACAATTATTATCATTCTAGTATTCGGTATACTTTGGTGGAAAGGATGTTTTGAAAAGAAAAACTCATTAGCGAGAGCTACGAATCACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCCGTGTACAAGGGATGCTTACCCAATGGGACATTGATAGCAGTAAAGCAACTTTCTTCTAAATCAAGGCAAGGGAATCGTGAGTTTTTAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTAATCTTGTTAAACTCTGCGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGATATATGAATACTTGGAAAACAATAGTTTAGCACGTGCTTTATTTGGTCCAGAAGAACTCCAAATAAAATTGGATTGGTCAACAAGGAGGAAGATCTATGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTGAAGGTTGTTCACAGGGACATCAAAGCATCTAATGTGTTGCTCGATAAAGATCTTAACCCAAAGATATCTGATTTTGGTTTAGCCAGACTTGATGAGGAGGACAATACTCACATTAGTACTAGAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACAGACAAGGCAGACGTTTATAGTTTTGGAATTGTTGCCATGGAAATCGTTAGTGGAAGGAGCAACACCCTTTATCGGTCCAAGGAGGAACCATTCTATCTTCTTAATTGGGCACATTTGTTGAAAGAGAGGGGTGACCTAATAGAACTAGTTGATAGAAGATTAGGTTCAGATTTCAACAAAAAGGAAGCTATGGTGGTAATCAATGTGGCTCTCCTATGCACGAATGTAACTTCAAACCTTAGGCCCTCCATGTCGTCGGTGGTAAGTTTCCTTGAAGGAAGGAGTATGGTTCCAGAATTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGTAATGAGGAAGTATTACTATCAGATGGAAGAAAATGAGAAAAGTAAGTCACAAACACAAAGTCAGAGTTTATCAATTGATGGGCCATGGACAGCTTCATCTTCGTCAGCTGTTGATCTTTATCCAGTTCACCTTGATTCTTCCTATTGGGAGAAAAGAAATTAA 2967 0.3916 MNTTSQFLFLSLIAIWFISLTAFGADTIHPDEKKALEDIGKSLGKKDWNFDIDPCSNKPNWATPPISKVVENNVTCDCSVAGDDFCHVVSITLKGQNLLGTLPPELTGLHYLQTIDLSRNYLNGTIPKEWGSMMNIRKIALPENRLSGSIPAEIANISTLQILELWNNQLSGNLPPELGSLTQILTLRISSNNFIGELPGTLTKLTTLRDFRIEDNQFSGKIPDYIQNWININTLVIQGSGLSGPIPSGISLLRNLTDLRISDLNGFEYAPLPELNKMTSLKTLILRNCNINGKLYDYLGTIASLKILDLSFNKLSGTIPRSYAAMNSSNYIFLTGNLLTGPVPPTWRKNTYVDLSYNNFSISQESQICRDDNVNLFSTSRAHNDMGTVSCLSLKCPKPSYSLYINCGGYQAIVNRTTYDGDSDSSGPARSHATENWAFSSTGLFIEHDILGRTFTPQNISKLTMEDAELYMNARISPISLTYYGFCLASGSYTVNLHFAEIMFTDDQTYGSLGRRVFDIYLQGKQVQKDFNIAQEAGGVGKKIIKQFKDVVVSSNTLEIRLYWAGKGTQAVPNKSVYGPLISAISVESDSPPGTGSISAGAVAGIVIAATIIIILVFGILWWKGCFEKKNSLARATNHFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPNLVKLCGCCVEGDQLLLIYEYLENNSLARALFGPEELQIKLDWSTRRKIYVGIARGLAYLHEESRLKVVHRDIKASNVLLDKDLNPKISDFGLARLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVAMEIVSGRSNTLYRSKEEPFYLLNWAHLLKERGDLIELVDRRLGSDFNKKEAMVVINVALLCTNVTSNLRPSMSSVVSFLEGRSMVPEFVSDSSEVMDEKKMEVMRKYYYQMEENEKSKSQTQSQSLSIDGPWTASSSSAVDLYPVHLDSSYWEKRN 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00015 988 Gene3D Ribonuclease Inhibitor 199 386 IPR032675 -
Vivi255g00015 988 Gene3D Phosphorylase Kinase; domain 1 626 715 - -
Vivi255g00015 988 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 199 265 - -
Vivi255g00015 988 Pfam Protein tyrosine and serine/threonine kinase 642 911 IPR001245 GO:0004672|GO:0006468
Vivi255g00015 988 SMART serkin_6 640 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00015 988 MobiDBLite consensus disorder prediction 947 968 - -
Vivi255g00015 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 950 - -
Vivi255g00015 988 FunFam Putative LRR receptor-like serine/threonine-protein kinase 716 923 - -
Vivi255g00015 988 SUPERFAMILY L domain-like 83 360 - -
Vivi255g00015 988 CDD STKc_IRAK 646 913 - -
Vivi255g00015 988 Gene3D - 398 590 - -
Vivi255g00015 988 Gene3D Transferase(Phosphotransferase) domain 1 716 926 - -
Vivi255g00015 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Vivi255g00015 988 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 198 - -
Vivi255g00015 988 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 622 715 - -
Vivi255g00015 988 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 400 590 - -
Vivi255g00015 988 ProSiteProfiles Protein kinase domain profile. 640 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00015 988 SUPERFAMILY Protein kinase-like (PK-like) 631 924 IPR011009 -
Vivi255g00015 988 Pfam Malectin domain 402 585 IPR021720 -
Vivi255g00015 988 Gene3D Ribonuclease Inhibitor 31 198 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00015 27 957 Receptor kinase-like Gene Family AT1G53420 53.076 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00015 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00015 - - gmx:732563 1252.65