Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00014 ATGAACACTTCCTCTCAATTTTTCTTCCTTTCACTCATTGCCATATGGCTCATATCTCTAACAGCTTTTGGAGCTACTACTATTCACCCGGACGAAAAGAAAGCTCTTGAAGATATAGCTACATCACTTGGTAAGAAGGATTGGAACTTCGGCATAGATCCATGCAGCAACAAACCTAACTGGTTTACGCCTCCCATACCCAAAATCTTAGAAAACAATGTAACCTGTAACTGCTCTGTTCCTAGTGACAACTTCTGTCATGTTACTATAATAAGTTTGAAAGGGCAAAATCTTCAAGGCACTCTCCCACGGGAACTGAACAGGTTGCAATACCTTCAAACTATTGACCTCTCTCGCAATTACTTGAACGGTACAATTCCTAAAGAATGGGGCTCCATGACGAATCTTCTTAACATTAATCTCCTTGGAAATCGATTAACGGGTTCAATACCAAAGGAGATTGCAAATATATCAACCCTGATTCAGTTGGAGTTAACGGCCAATCAAATGTCTGGAAATATTACTTCTGAGCTTGGGAATCTCCCCCAGATTCGAACACTGCGATTTTCTTCTAACAATTTTTCTGGAGAGCTACCTGTGACATTAGCCAAGCTCGCTACATTGCAAGAGTTCCAAATTTCGGACAACCAATTCTCAGGAAAGATACCCGATTTTATTCAGAACTGGACTAATATCAATACGCTAATCATTCAAGGGAGCGGATTAAGTGGACCAATTCCTTCCGAAATTTCACTATTGAGAAACTTAACCGACTTGAGAATTAGTGATTTAAATGGATCTGAATATGCACCTTTGCCGCAACTTAAAAATCTGACATCGTTAAGCAAACTGCTTCTAAGGAATTGCAACATCAATGGAACACTACCTGATCTCGGGACTAAGACATCGTTAAAATACTTAGACTTCAGCTTTAACAAATTAAGTGGAACAATTCCAAGTACCTATGCTGACATAAACGATATTATGAACTTCATATTTTTAACTGGAAACCTTCTCACAGGACCAATACCTTCTTGGAAAACGAACGTCTACGTAGATCTTTCGTACAATAACTTCAGCGTCAGCCAAGGGAATCGGATATGTCAAAATGATAAAGTAAACTTGTTTTCTACCTCATGGGCAAATAATAACATAGGAACAGTTTCGTGTTTGAGCGGATGCACCAATCCCTCCTACTCCCTTTATATAAATTGTGGTGGACAGCAAGAAACAGTTAGCAGAACAAGTTATAATGGCGATTCAGATTCACCTGGAGCAGCTAAATTCCATGTCAGTCCAACAGGAAATTGGGCATTTAGCACCACTGGTATATTCATTGATAGTGACCAACTCGGAGAAACTTATTCCCCGCAAAATGTCACCACACTTACTATGGAAGATGCTGATTTGTACATGAATGCACGTGGTTCTGCTATTTCTTTGACTTATTATGGGTTTTGCCTGGCAAATGGAAGCTACACAGTAAATCTACATTTTGCTGAAATAATGTTCAGAGACGACCAAACTTATGGAAGTCTTGGAAGACGTGTATTTGATATCTACCTTCAGGGAAAGCCAGTGCAAAAGGACTTCAATATTGCCAAAGAAGCAGGAGGAGTTGGTAAGAAAGTTATAAAACAGTTCAAAGATGTTGTTGTCACTAGTAATACCTTGGAGATCCGTTTGTATTGGGCTGGAAAAGGGACACAGGCTCTCCCAAATAGATCAATATTTGGTCCTCTTATATCTGCCATATCAGTGGAATCTGACTCTCCACCTGGAACTGGAAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGTTGCAGCAACAGTTATTATCATTCTAGTATTTGGTATACTTTGGTGGAAAGGATGTTTTGGAAAAAAAAACTCATTAGCAAAAGACTTGAAGAGTTTAGACGTTCAAACGGGTATATTTACCTTACGACAAATCAAAGCAGCTACAAATAACTTCGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTAAAGCAACTTTCTTCTAAGTCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACATCCTTATCTCGTTAAACTCCATGGCTGCTGTGTGGAGGGAGATCAGTTGTTGCTGATATATGAATACCTGGAAAACAATAGTCTAGCTCGTGCCTTATTTGGTTCAGAGGAACACCAAATAAAATTACATTGGTCAACAAGGCAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCCACTAATGTATTGCTTGATACGAATCTTGACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGACGAGGAGGACAATACTCACATTAGTACTAGAATTGCCGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTAACAGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAGTCGTTAGTGGAAGAAACAACACCCTTCATCGGGCAAAGGAGGAAGCAGTCTATCTTCTTGATTGGGCACATTTGTTGAAAGAAAGGGGTGACCTAATGGAGCTAGTTGATAGAAGATTAGGTTCAGATTTCAACAAAAAGGAAGCTATGGTGATGATCAATGTGGCTCTTCTATGCACCAATGTCACTTCAAATCTTAGGCCTGCCATGTCATCAGTTGTAAGTTACCTTGAAGGAAGGACTATGGTTCCAGAGTTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGTTGGAAGTAATGAGGCAGTATTACTACCAGAAGGAAGAAAATAATACAAGTAGTACGTCACATACACAAAGTCAGAGTTTAATAAGTGATGGGCCATGGACTGCTTCATCTTCATCAGCTGTAGACCTTGATTCTTCCTATTTGGATGGAAGAAATTAA 3012 0.3951 MNTSSQFFFLSLIAIWLISLTAFGATTIHPDEKKALEDIATSLGKKDWNFGIDPCSNKPNWFTPPIPKILENNVTCNCSVPSDNFCHVTIISLKGQNLQGTLPRELNRLQYLQTIDLSRNYLNGTIPKEWGSMTNLLNINLLGNRLTGSIPKEIANISTLIQLELTANQMSGNITSELGNLPQIRTLRFSSNNFSGELPVTLAKLATLQEFQISDNQFSGKIPDFIQNWTNINTLIIQGSGLSGPIPSEISLLRNLTDLRISDLNGSEYAPLPQLKNLTSLSKLLLRNCNINGTLPDLGTKTSLKYLDFSFNKLSGTIPSTYADINDIMNFIFLTGNLLTGPIPSWKTNVYVDLSYNNFSVSQGNRICQNDKVNLFSTSWANNNIGTVSCLSGCTNPSYSLYINCGGQQETVSRTSYNGDSDSPGAAKFHVSPTGNWAFSTTGIFIDSDQLGETYSPQNVTTLTMEDADLYMNARGSAISLTYYGFCLANGSYTVNLHFAEIMFRDDQTYGSLGRRVFDIYLQGKPVQKDFNIAKEAGGVGKKVIKQFKDVVVTSNTLEIRLYWAGKGTQALPNRSIFGPLISAISVESDSPPGTGSISAGAVVGIVVAATVIIILVFGILWWKGCFGKKNSLAKDLKSLDVQTGIFTLRQIKAATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLHGCCVEGDQLLLIYEYLENNSLARALFGSEEHQIKLHWSTRQKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDTNLDPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEVVSGRNNTLHRAKEEAVYLLDWAHLLKERGDLMELVDRRLGSDFNKKEAMVMINVALLCTNVTSNLRPAMSSVVSYLEGRTMVPEFVSDSSEVMDEKKLEVMRQYYYQKEENNTSSTSHTQSQSLISDGPWTASSSSAVDLDSSYLDGRN 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00014 1003 Pfam Malectin domain 400 585 IPR021720 -
Vivi255g00014 1003 Gene3D Phosphorylase Kinase; domain 1 627 734 - -
Vivi255g00014 1003 FunFam Putative LRR receptor-like serine/threonine-protein kinase 735 942 - -
Vivi255g00014 1003 Gene3D Transferase(Phosphotransferase) domain 1 735 945 - -
Vivi255g00014 1003 Gene3D Ribonuclease Inhibitor 160 268 IPR032675 -
Vivi255g00014 1003 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 628 734 - -
Vivi255g00014 1003 SMART serkin_6 659 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00014 1003 SUPERFAMILY Protein kinase-like (PK-like) 642 945 IPR011009 -
Vivi255g00014 1003 Gene3D - 398 590 - -
Vivi255g00014 1003 Pfam Protein tyrosine and serine/threonine kinase 661 928 IPR001245 GO:0004672|GO:0006468
Vivi255g00014 1003 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 398 590 - -
Vivi255g00014 1003 Gene3D Ribonuclease Inhibitor 31 159 IPR032675 -
Vivi255g00014 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Vivi255g00014 1003 MobiDBLite consensus disorder prediction 963 996 - -
Vivi255g00014 1003 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 29 265 - -
Vivi255g00014 1003 CDD STKc_IRAK 665 932 - -
Vivi255g00014 1003 MobiDBLite consensus disorder prediction 963 1003 - -
Vivi255g00014 1003 ProSiteProfiles Protein kinase domain profile. 659 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00014 1003 SUPERFAMILY L domain-like 52 405 - -
Vivi255g00014 1003 Gene3D Ribonuclease Inhibitor 269 388 IPR032675 -
Vivi255g00014 1003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 968 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00014 25 975 Receptor kinase-like Gene Family AT1G53420 54.253 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00014 PK_Tyr_Ser-Thr 9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00014 - - gmx:732563 1278.85