Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00010 ATGGTGAATCTTCTTAACATTACTCTCCCTGGAAATCGATTAACGGGGTCAATACCAAAGGAGATTGCAAATATATCTACCCTGCTTCACTTGGAGTTAACGGCCAATCAAATGTCTGGGAATATTACTTCTGAGCTTGGGAATCTAACCCAGATTCAAACACTGCGAATTTCCTCTAACAATTTTTCGGGAGAACTACCTGCAACATTGGCCAAGCTTACTACATTGCAAAATTTCCATATTTCAGACAACCAATTCACAGGAAAGATACCCGATTTTATTCAGAACTGGACTAATATCACTACGCTAATCATTCAAGGGAGTGGATTAAGTGGGCCTATTCCTTCCAAAATTTCAATTTTGAGAAACTTAACTGACTTGAGAATTAGTGATTTGAATGAATCTGAATATGCACCTTTGCCCCAACTAAATAATCTGACATTGTTACAAAAACTGATTCTGAGGAATTGCAACATCAATGGAACTCTACCTGAATATCTTAATGCTATCACATCATTAAAATACTTAGACTTCAGCTTTAACAAATTCAGTGGAACAATTCCGAGTACCTATGCTGACATAAATGGCGTGAAATTCATATTTTTAACTGGAAACCTTCTCACAGGACCGGTGCCTTCTTGGAAAAAGAACATCGACGTAGATCTTTCATACAATAACTTCAGCATCACCCAAGAAAGTCAGATATGTCAAAGTGATAAACTAAACTTGTTTTCTACCTCATGGGCAAACAATGACATAGGAACAGTTTCGTGTTTGAGCGAATGTCGCAAACCCTCATACTCCCTTTATATAAATTGTGGTGGAAAGCAAGAAAAAGTCAATGGAGCAAGTTATGATGACGATTCAGATTCACCTGGACCAGCTAAACTCCATGTCAGTCCAACAGGAAAATGGGCATTTAGCACCACTGGTTTGTTCATTGATGGTGATCAACTTGGAGAAACTTATTCCCCACCAGATTTTACTCCACTTACTATGGAAGATGCTAAGTTGTACATGAATGCACGCGGTTCTCCCATTTCTTTGACTTATTATGGGTTTTGTCTGAAAAATGGAAGCTACACGGTAAATCTTCATTTTGCTGAAATAATGTTCACAGACGATCAAACTTATGGTAGTCTTGGAAGACGTGTATTTGATATCTACCTTCAGGGAAATCCAGTGCAAAAGGACTTCAATATTGCAAAAGAAGCGGGAGGAGTTGGTAAGAAAGTCATAAAACAGTACAAAAATGTTTCTGTTACTAGTAGTACCTTGGAGATCCGTTTGTATTGGGCTGGAAAAGGGACACAATCTCTTCCAAATAGATCAGTATTTGGTCCTCTTATATCGGCCATATCAATGGAATCTGACTCTCCACCTGGAGGCATATCTGCAGGAGTTGTGGTTGGAATTGTGGTTGCAGCAACAGTTATTATCATTCTAGTATTTGGTATACTTTGGTGGAAAGGATGTTTTAAGAAGAAAGAATCATTAGCAAGAGAGCTGAAGAGTTTGGACGTTCAAACTGGTTTATTTGCCTTAAGACAAATCAAAGCAGCTACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCCGTGTATAAGGGATGTTTACCCAATGGGACATTGATAGCAGTAAAGCAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAAACTCCATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGGTATATGAATACCTGGAAAACAATAGTCTAGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATTAAATTAGATTGGCCAACAAGGCATAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTGAAGGTTGTTCACAGGGACATCAAGGCCACTAATGTATTGCTTGATACGAATCTTGACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAGGACAATACTCACATTAGTACTAGAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATTGTTAGTGGAAAGAGCAACACCATGTATCGATCAAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATTTGTTGAAAGAGAGGGGTGACCTGACGGAGCTAGTTGATAGAAGATTAGGTTTAGATTTCAACAAAAAGGAGGCTATGGTGGTAATCAATGTGGCTCTCCTATGCACCAATGTCACTTCAAATCTTAGGCCCGCGATGTCATCAGTTGTAAGTTTCCTTGAAGGAAGGAATGTGGTTCCAGAGTTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGTTGGAAGTAATGAGGCAGTATTACTACCAGAAGGAAGAAAATAATATAAGTACTACCTCACAAAGTCAGAGTATATTAAATGACGGGTCATGGACTGCTACATCTTCATCAGCTGTAGACCTTTATCCTGTCCACCTTGATTCTTCCTATTGGGAGGAAAGAAATTAA 2619 0.3872 MVNLLNITLPGNRLTGSIPKEIANISTLLHLELTANQMSGNITSELGNLTQIQTLRISSNNFSGELPATLAKLTTLQNFHISDNQFTGKIPDFIQNWTNITTLIIQGSGLSGPIPSKISILRNLTDLRISDLNESEYAPLPQLNNLTLLQKLILRNCNINGTLPEYLNAITSLKYLDFSFNKFSGTIPSTYADINGVKFIFLTGNLLTGPVPSWKKNIDVDLSYNNFSITQESQICQSDKLNLFSTSWANNDIGTVSCLSECRKPSYSLYINCGGKQEKVNGASYDDDSDSPGPAKLHVSPTGKWAFSTTGLFIDGDQLGETYSPPDFTPLTMEDAKLYMNARGSPISLTYYGFCLKNGSYTVNLHFAEIMFTDDQTYGSLGRRVFDIYLQGNPVQKDFNIAKEAGGVGKKVIKQYKNVSVTSSTLEIRLYWAGKGTQSLPNRSVFGPLISAISMESDSPPGGISAGVVVGIVVAATVIIILVFGILWWKGCFKKKESLARELKSLDVQTGLFALRQIKAATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLHGCCVEGDQLLLVYEYLENNSLARALFGPEEHQIKLDWPTRHKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDTNLDPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNTMYRSKEEAFYLLDWAHLLKERGDLTELVDRRLGLDFNKKEAMVVINVALLCTNVTSNLRPAMSSVVSFLEGRNVVPEFVSDSSEVMDEKKLEVMRQYYYQKEENNISTTSQSQSILNDGSWTATSSSAVDLYPVHLDSSYWEERN 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00010 872 Gene3D Ribonuclease Inhibitor 2 69 IPR032675 -
Vivi255g00010 872 Gene3D Ribonuclease Inhibitor 137 268 IPR032675 -
Vivi255g00010 872 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 266 458 - -
Vivi255g00010 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Vivi255g00010 872 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 494 600 - -
Vivi255g00010 872 Gene3D Transferase(Phosphotransferase) domain 1 601 810 - -
Vivi255g00010 872 Gene3D Ribonuclease Inhibitor 70 136 IPR032675 -
Vivi255g00010 872 SMART serkin_6 525 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00010 872 Gene3D - 269 458 - -
Vivi255g00010 872 Gene3D Phosphorylase Kinase; domain 1 490 600 - -
Vivi255g00010 872 SUPERFAMILY Protein kinase-like (PK-like) 508 812 IPR011009 -
Vivi255g00010 872 CDD STKc_IRAK 531 798 - -
Vivi255g00010 872 ProSiteProfiles Protein kinase domain profile. 525 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00010 872 Pfam Malectin domain 268 453 IPR021720 -
Vivi255g00010 872 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 66 133 - -
Vivi255g00010 872 SUPERFAMILY L domain-like 3 242 - -
Vivi255g00010 872 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 836 - -
Vivi255g00010 872 FunFam Putative LRR receptor-like serine/threonine-protein kinase 601 808 - -
Vivi255g00010 872 Pfam Protein tyrosine and serine/threonine kinase 527 795 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00010 4 836 Receptor kinase-like Gene Family AT1G53420 56.568 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00010 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00010 - - gmx:732563 1154.04