Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi255g00008 ATGAATATCTCTTTCCTTCTATTATTCCATCTTTTGCTTCATGTCTTTTGTTGTATCTCTTCATTTGCTAGTGGAGCTACTCTGCCAGAAGAAGAAGTACAAGCTATGAAAGACATAGCTAAGACACTTGGGAAGAAGGATTGGGACTTCAGCATAGATCCATGCAGTGGACAAAGTAATTGGACATCTTCTCCTGTGCAAGTGAAAGGATTTGAAAATGCTGTGACTTGCAATTGCTCTTTTGCCAATGCCACTACCTGCCATATTGTTAGCATAGTTCTAAAGTCACAAAATCTTTCTGGCACACTTCCAAGAGAATTTGTGAAATTACCTTACCTCCAACAAATTGATCTCACACGCAACTACCTTAACGGTACAATCCCTCCACAATGGAGCTCCATCAATCTTGTTAACATTTCATTATTTGGAAATAGATTAACAGGTCCAATTCCAAAAGAATTTGGAAAAATCACCACCCTGAAAAGCTTGGTTTTGGAGTTCAATCAGTTTTCCGGAAAGCTGCCTCCGGAGCTTGGGAATCTTCACCAGCTTGAAAGATTGCTTCTTACTTCCAACTATTTTACTGGAAATTTACCTGCAACATTTGCTAAGCTCACTAAACTTAAGTACCTTCGACTTGGCGACAACCAATTCTCTGGAACTATTCCTGATTTCATTCAGAGTTGGACAAGTCTTGAGAGGCTGGTGATACAAGGGAGTGGTTTGAGTGGTCCAGTTCCTTCTGCAATTTCATATCTGAAAAATCTTACCGACTTGAGAATAAGTGACTTGAAAGGATCAGATTCTCCATTTCCGCAACTTAATAACTTGACAAATTTGGAAACATTAGTATTGAGGAGTTGCAATCTTATAGGAACAGTTCCGGAGTATCTTGGAAATATTACCAATTTAAGATCATTAGACCTCAGTTTTAACAAATTAAGTGGAGAAATTCCGAACACCTTGGGTGGCTTGGAGAATATAAATATACTATACTTAACTGGAAACTTTTTTACTGGACCACTGCCAAATTGGATAGCTAGACCGGACTACACAGATCTTTCGTATAACAATTTGACCATTGAAAATCCAGAGCAGTTGACATGTCAACAGGGAACCTTGAACTTGTTTGCATCATCTTCAGAGGGAAGTAACTTGGGAACGGTTTCTTGTTTGGGGAACATTGGTTGCCCGAAAACTCGGTACTCTCTCCATATAAATTGCGGTGGTAAGCTCATAACTTCAAATGAAAGCTTGACGTATGATGATGATTCAAATGAAGTTGGACCAGCAAGCTTTCACCGGACTGAATCAAATTGGGCACTCAGCAACACTGGTCACTTTTTTGATAGTGGCCTTGTGGACTACTATACCTGGTCTAACACAACTAACCTTGCCATCGACAATGGAGAACTGTATATGGACGCTCGTGTTTCTCCTCTTTCTCTAACATATTATGGATTTTGCCTGGGAAATGGAAACTACACAGTAAAACTCCATTTTGCAGAGATAATGTTCACTGATGATCAAACTTATAACAGCCTTGGGAGGCGTATATTTGACATCTACGTTCAGAGAAGGTTGGTGCTGAAGGATTTCGATATTGCAAAAGAAGCTGGTGGAGTTGGTAAGGCAATCATAAAGAACTTCACTGCTGTTGTGACTAGTAATACCTTGGAGATTCGCCTTCAGTGGGCTGGGAAAGGCACAACTGCTATTCCATTTGGATCGGTATATGGTCCTCTTATATCGGCTATATCAGTTGATCCTGACTTTACACCCCCAGTGGAAAAAGGAAGTGGCATACATGGGTGGGATATTATTGCAGTTGTAGTTGCTGGAGCACTATTTGTCTTCATCTTATTTGGTATAGCTCAGTGGAGAAGACGTCAACGACAAATAGGTCCTTTAGAAAGAGAGGTAAAGGGTTTAGATTTCCAACCTGGGTTATTTACGTTACGGCAAATCAAAGCAGCAACTAACAACTTCGATATAGCCTTTAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTGTTCTTTCGGACGGCAGAATAGTAGCAGTTAAGAAGCTTTCTTCTAAATCAAAGCAAGGGAATCGTGAATTTATAAATGAGATTGGTTTAATTTCTGCTTTGCAACACCCTTGTCTAGTTAAGCTCTATGGTTGTTGTATGGAGGGAGATCAGTTATTGCTGATATATGAATACATGGAAAATAATAGCCTTGCTTGTGCTTTGTTTGCCAAAGGAAAAGATCAATTGAAACTAGCTTGGTCAACAAGGAAGAGAATTTGTGTTGGTATTGCTAGAGGTTTAGCTTACCTTCATGAAGAATCAAGACTAAAGATAGTTCACAGAGACATCAAGGCTACTAATGTATTACTGGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCGAAGCTTAAAGATGAGGGTTACACTCACATAACCACTAGAATAGCCGGCACTTATGGATATATGGCTCCAGAATATGCAATGCACGGATATTTGACTGAGAAAGCAGATGTTTATAGTTTCGGAGTTGTTGCCTTGGAAATTGTTAGTGGGAAGCACAACACCATGAGTTGTCCTAAGGATGAATGCTTCTCTATTGTTGATTGGGTGCATCTCTTGAAGGAAGAAGGTAATATAATGGACCTAGTTGATGAGAGGTTAGGTGGAGATTTCAAAAAAGAGGAAGTAATGACCATGATCAATGTGGCTCTTTTATGCACTCATGTTTCTCCAATGCACAGGCCAACCATGTCATCAGTTGTAAGCATGCTTGAAGGAAAATCTGTTGTTGAAGAAGTGGTGTCTGACACAAGCCAAGTTTTTGAAGGGAAAAAGTTGGAGATGATTCAACAGTATTACCAACAAAGTGAAAAAAATGTTACCCCTGAAACTGAAGAAGAGAGCATCTTAATAGATGCAACTGCAGAATACATGTCTGATACAAATCTGCAATCTGTCAACATGGATTCTCCTTATAGAAGTTTCAACACTCTGTAA 3027 0.3948 MNISFLLLFHLLLHVFCCISSFASGATLPEEEVQAMKDIAKTLGKKDWDFSIDPCSGQSNWTSSPVQVKGFENAVTCNCSFANATTCHIVSIVLKSQNLSGTLPREFVKLPYLQQIDLTRNYLNGTIPPQWSSINLVNISLFGNRLTGPIPKEFGKITTLKSLVLEFNQFSGKLPPELGNLHQLERLLLTSNYFTGNLPATFAKLTKLKYLRLGDNQFSGTIPDFIQSWTSLERLVIQGSGLSGPVPSAISYLKNLTDLRISDLKGSDSPFPQLNNLTNLETLVLRSCNLIGTVPEYLGNITNLRSLDLSFNKLSGEIPNTLGGLENINILYLTGNFFTGPLPNWIARPDYTDLSYNNLTIENPEQLTCQQGTLNLFASSSEGSNLGTVSCLGNIGCPKTRYSLHINCGGKLITSNESLTYDDDSNEVGPASFHRTESNWALSNTGHFFDSGLVDYYTWSNTTNLAIDNGELYMDARVSPLSLTYYGFCLGNGNYTVKLHFAEIMFTDDQTYNSLGRRIFDIYVQRRLVLKDFDIAKEAGGVGKAIIKNFTAVVTSNTLEIRLQWAGKGTTAIPFGSVYGPLISAISVDPDFTPPVEKGSGIHGWDIIAVVVAGALFVFILFGIAQWRRRQRQIGPLEREVKGLDFQPGLFTLRQIKAATNNFDIAFKIGEGGFGPVYKGVLSDGRIVAVKKLSSKSKQGNREFINEIGLISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLACALFAKGKDQLKLAWSTRKRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKDEGYTHITTRIAGTYGYMAPEYAMHGYLTEKADVYSFGVVALEIVSGKHNTMSCPKDECFSIVDWVHLLKEEGNIMDLVDERLGGDFKKEEVMTMINVALLCTHVSPMHRPTMSSVVSMLEGKSVVEEVVSDTSQVFEGKKLEMIQQYYQQSEKNVTPETEEESILIDATAEYMSDTNLQSVNMDSPYRSFNTL 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi255g00008 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 738 - -
Vivi255g00008 1008 Pfam Leucine rich repeat 278 336 IPR001611 GO:0005515
Vivi255g00008 1008 CDD STKc_IRAK 669 936 - -
Vivi255g00008 1008 Pfam Protein kinase domain 668 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00008 1008 Gene3D Ribonuclease Inhibitor 267 385 IPR032675 -
Vivi255g00008 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 32 192 - -
Vivi255g00008 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 198 265 - -
Vivi255g00008 1008 SMART serkin_6 663 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00008 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Vivi255g00008 1008 Gene3D Phosphorylase Kinase; domain 1 629 738 - -
Vivi255g00008 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 591 - -
Vivi255g00008 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 964 - -
Vivi255g00008 1008 ProSiteProfiles Protein kinase domain profile. 663 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi255g00008 1008 Gene3D Ribonuclease Inhibitor 200 266 IPR032675 -
Vivi255g00008 1008 Gene3D Ribonuclease Inhibitor 35 199 IPR032675 -
Vivi255g00008 1008 SUPERFAMILY Protein kinase-like (PK-like) 645 940 IPR011009 -
Vivi255g00008 1008 SUPERFAMILY L domain-like 83 360 - -
Vivi255g00008 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 946 - -
Vivi255g00008 1008 Gene3D Transferase(Phosphotransferase) domain 1 739 951 - -
Vivi255g00008 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 271 369 - -
Vivi255g00008 1008 Gene3D - 399 590 - -
Vivi255g00008 1008 ProSiteProfiles Leucine-rich repeat profile. 303 326 IPR001611 GO:0005515
Vivi255g00008 1008 Pfam Malectin domain 403 586 IPR021720 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi255g00008 19 964 Receptor kinase-like Gene Family AT1G53420 53.870 0.0 1005
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi255g00008 Pkinase 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi255g00008 - - psat:127081874 1746.1