Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi254g00004 ATGGCTTCCCCTTCTCCTTTTCCACACTCTCTCCCAATCTTCACTTTCTCTCTCATTCTCTTCCTCTCTCTTTCTCTCTCTCACTCATCAGACTCTCCACAAACCTACATCATCCACGTGGCAAAATCTCCACGCTCCTCCCTCTTCTCCACCAATCAAAACCATTTCTCCTCCATCCTCAACTCCCTCCCCTCTTCCCCCAACCCATCTTCCATCCTCTACACATACACGTCCGCCATTCACGGCTTCTCCGCCCACCTTACCCCCTCCCAAGCCGACCACCTTAAATCCCACCCCGACATCCTCTCCATCCAACCCGACCAAATCCGCCACCTCCACACAACGCACACTCCCGACTTCCTCGGACTCGTCGAATCCTCCGGACTATGGCCAAACTCACACTTCGCCTCCGACGTCATCATCGGCGTCCTCGACACCGGAATCTGGCCGGAGCTCCAAAGCTTCTCCGATCAGTCCCTCTCTCTTTCCACTCTCCCTTCTTCCTGGAAAGGAGCCTGCGAAACATCTCACGATTTTCCTAAATCTTCATGTAACGGAAAAATCATCGGTGCCAAATCATTCTACAGAGGCTACGAAGCTTACCTTCAAAGACCTATCGATGAAACCGTCGAATCGAAATCTCCGAGAGACACAGAAGGCCATGGAACTCATACAGCTTCAACCGCGGCCGGCTCGATTGTATCTAACGCCAGTTTGTTTCATTTCGCTAGAGGTGAAGCTAAGGGAATGGCAACGAAAGCTAGAATCGCTGCTTACAAGATCTGTTGGAGATCGGGTTGTTTTGACTCTGATATTCTTGCTGCTATGGATGAAGCTGTTTCAGATGGGGTTCATGTGATTTCACTCTCTGTTGGTTCTAATGGCTATGCACCTCAGTATTATCGTGATTCAATCGCGATTGGTGCTTTTGGTGCTGCGCAACACGGTGTTGTTGTTTCTTGTTCCGCTGGTAATTCAGGTCCGGGTCCTTATACTTCTGTTAACATAGCTCCTTGGATTTTAACCGTTGGTGCTTCGACGATTGATCGAGAGTTTCCTGCTGATGTTGTTCTCGGGGATGGTAGAGTTTTCGGCGGTGTTTCTTTGTATTATGGTGATGATTTGCCTGATTATAAGCTTCCTTTGGTTTATGCTAGAGATTGTGGTAGTAGATATTGTTACTTAGGATCTTTGGATTCTTCGAAAGTGAAAGGGAAGATTGTTGTTTGTGATAGAGGAGGGAATGCTAGAGTTGAGAAGGGTAGTGCTGTGAAAAGGGCTGGTGGGTTGGGAATGATTATGTCGAATACTGAAGATAACGGTGAAGAGCTTCTTGCTGATGCTCATCTTGTTGCAGCTACAATGGTTGGTCAGATTGCTGGTGATAAGATTAAAGAGTATATAAGATCGAGTGAGAATCCGACTGCTACGATCGAGTTTAAAGGAACTGTGATCGGTGGTTCGGATTCGCCTTCTGCTCCTAGAGTTGCTTCGTTTTCGAGTAGGGGTCCGAATTATAGAACTGCGGAGATTCTTAAACCAGATGTTATAGCTCCGGGTGTTAACATTTTAGCAGGGTGGACTGGTAAAGTTGGTCCTACTGATTTGGATTTGGATCCGAGGAGAGTTGAGTTTAACATCATTTCAGGTACTTCTATGTCTTGTCCTCATGTTAGTGGAATTGCTGCATTGCTTAGGAAAGCTTATCCAGGTTGGTCACCAGCTGCGATTAAATCGGCTTTGATGACAACCGCTTATAATGTTGATAATACCGGAGAAGCAATTAAGGATCTTGGAACAGGTAAAGAGTCGAATCCGTTCGTTCATGGAGCTGGGCATGTTGATCCTAACAAAGCGCTTAATCCCGGGTTGGTTTACGATATAAACAGTAACGATTATTTAGCATTCCTTTGTTCAATTGGTTATGATGCTAGGAAAATTCAGGTTTTCACTAGAGAACCAACTAGTTTTGATGTTTGTGAAAATGAAAGGAAGTTTTCTAGTCCCGGTGATTTGAATTACCCTTCGTTCTCTGTTGAGTTCGGCGCAAACAATGGATTGGTTAAGTACAAAAGAGTTGTTACTAATGTTGGTGGTTCTGTTGATGCTGTTTACAGTGTCAAAGTGAATGCTCCTTTTGGTGTTGATGTTAGTGTTTCACCTAGCAAACTTGTTTTCAGCAGTGAAAACCAAACTCAAGCTTTTGAGGTAACATTCACTAGAATTGGATATGGTGGTTCTCAGAGTTTTGGGTCATTGGAATGGAGTGATGGAGTTCATATTGTGAGGAGCCCGATTGCTGCTAGATGGAGCAATGGATTCTCATCAGCATCCTTTTGA 2340 0.4521 MASPSPFPHSLPIFTFSLILFLSLSLSHSSDSPQTYIIHVAKSPRSSLFSTNQNHFSSILNSLPSSPNPSSILYTYTSAIHGFSAHLTPSQADHLKSHPDILSIQPDQIRHLHTTHTPDFLGLVESSGLWPNSHFASDVIIGVLDTGIWPELQSFSDQSLSLSTLPSSWKGACETSHDFPKSSCNGKIIGAKSFYRGYEAYLQRPIDETVESKSPRDTEGHGTHTASTAAGSIVSNASLFHFARGEAKGMATKARIAAYKICWRSGCFDSDILAAMDEAVSDGVHVISLSVGSNGYAPQYYRDSIAIGAFGAAQHGVVVSCSAGNSGPGPYTSVNIAPWILTVGASTIDREFPADVVLGDGRVFGGVSLYYGDDLPDYKLPLVYARDCGSRYCYLGSLDSSKVKGKIVVCDRGGNARVEKGSAVKRAGGLGMIMSNTEDNGEELLADAHLVAATMVGQIAGDKIKEYIRSSENPTATIEFKGTVIGGSDSPSAPRVASFSSRGPNYRTAEILKPDVIAPGVNILAGWTGKVGPTDLDLDPRRVEFNIISGTSMSCPHVSGIAALLRKAYPGWSPAAIKSALMTTAYNVDNTGEAIKDLGTGKESNPFVHGAGHVDPNKALNPGLVYDINSNDYLAFLCSIGYDARKIQVFTREPTSFDVCENERKFSSPGDLNYPSFSVEFGANNGLVKYKRVVTNVGGSVDAVYSVKVNAPFGVDVSVSPSKLVFSSENQTQAFEVTFTRIGYGGSQSFGSLEWSDGVHIVRSPIAARWSNGFSSASF 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi254g00004 779 FunFam subtilisin-like protease SBT1.5 349 485 - -
Vivi254g00004 779 Pfam Fibronectin type-III domain 671 767 IPR041469 -
Vivi254g00004 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Vivi254g00004 779 Gene3D Peptidase S8/S53 domain 138 633 IPR036852 GO:0004252|GO:0006508
Vivi254g00004 779 SUPERFAMILY Protease propeptides/inhibitors 33 112 - -
Vivi254g00004 779 ProSiteProfiles Serine proteases, subtilase domain profile. 118 620 - -
Vivi254g00004 779 Pfam PA domain 380 463 IPR003137 -
Vivi254g00004 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Vivi254g00004 779 FunFam Subtilisin-like protease SBT1.5 637 771 - -
Vivi254g00004 779 SUPERFAMILY PA domain 377 472 IPR046450 -
Vivi254g00004 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 767 IPR045051 -
Vivi254g00004 779 Gene3D - 349 485 - -
Vivi254g00004 779 FunFam Subtilisin-like protease SBT1.5 138 361 - -
Vivi254g00004 779 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Vivi254g00004 779 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Vivi254g00004 779 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Vivi254g00004 779 MobiDBLite consensus disorder prediction 208 227 - -
Vivi254g00004 779 CDD PA_subtilisin_like 355 478 - -
Vivi254g00004 779 FunFam Subtilisin-like protease SBT1.9 24 113 - -
Vivi254g00004 779 SUPERFAMILY Subtilisin-like 112 624 IPR036852 GO:0004252|GO:0006508
Vivi254g00004 779 Pfam Peptidase inhibitor I9 35 113 IPR010259 -
Vivi254g00004 779 Gene3D - 637 770 - -
Vivi254g00004 779 Pfam Subtilase family 137 591 IPR000209 GO:0006508|GO:0008236
Vivi254g00004 779 CDD Peptidases_S8_3 111 586 IPR034197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi254g00004 13 773 Subtilisin-like Serine Gene Family AT3G14067 64.675 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi254g00004 - - tpra:123883043 1337.4