Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi253g00002 ATGAGGAGGAACTGCAACTTAGAACTCTGCCTTTTTCCTCAATATGTATCTGATAACAATCACAATCACAACAATCACATGGTTGAAGAAGAAAGAGATAGTGATCAAAGTTCAATCCAAAATCAGCAACAGCCACTGACTATTTTCTACGATGGCAAGATGTGTGTTACTGATGTTACTGAGTTTCAGGCCAAATCAATCTTAATGATGGCAAATAGAAAAGTGCAAGAAACGGTAAAGACACCAACAGAGTCAGAGGCATCAACACCAACAACAGTAGAATCTCCTCATCAATTGTATAGCCCTGGTCCTGCTCTATCAATGAAAATGTCTTTGCAACGGTTTCTACAAAAGAGAAAAAATAGGGCTCAACAAGCTTCTCCATACAATCATTAG 396 0.3838 MRRNCNLELCLFPQYVSDNNHNHNNHMVEEERDSDQSSIQNQQQPLTIFYDGKMCVTDVTEFQAKSILMMANRKVQETVKTPTESEASTPTTVESPHQLYSPGPALSMKMSLQRFLQKRKNRAQQASPYNH 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi253g00002 131 MobiDBLite consensus disorder prediction 77 98 - -
Vivi253g00002 131 ProSiteProfiles Tify domain profile. 39 73 IPR010399 -
Vivi253g00002 131 MobiDBLite consensus disorder prediction 21 42 - -
Vivi253g00002 131 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 27 130 IPR040390 -
Vivi253g00002 131 Pfam tify domain 42 72 IPR010399 -
Vivi253g00002 131 SMART tify_2 39 73 IPR010399 -
Vivi253g00002 131 MobiDBLite consensus disorder prediction 77 104 - -
Vivi253g00002 131 Pfam Jas motif 109 129 IPR018467 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi253g00002 1 129 Tify Gene Family AT1G30135 43.939 7.71e-23 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi253g00002 tify 3.1e-12 No_clan