Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi246g00030 ATGCGTGGTAATGGAACGATGGTTGGAGTGGTGGGTTTAGTGGGTAGAAGTAAAGTTTCGGTTTTTGAGAAAGGTGAAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGTTAAAGGGTGTGATTTGAGTAAAGGGTATTGGGTTTTTGATGAAAGGTATCCTCTTTATGGTGGAGCTTCTTATCCTTTTGTTGATGAAGGTTTTGATTGCGAGGGGAATGGAAGATTGGATAGAAATTTTACTAAGTGGAGATGGCAACCTCAATATTGTGACCTTCCAAGATTCAATGCAACAAAAATGTTGGAGTTGATAAGAGGAAAAAAACTAGTTTTTGTGGGTGATTCAATTAATAGGAACCAATGGGAATCAATGTTGTGCATGTTATTGAGTGATGTTAAAGATCTACAGAGAGTGTTTGAGGCACGTGGAAGGAAAATTACCAAAGAGAAAGGGAACTATAGTTTCAGGTTTCTGGCAGGAGGTCTTGCAGGAGGTCTTCATGAGGGTGCTAAAGTGATTGAGAAGCATGCCGCACAACTCTATACTCTAGTCGAAGATTGTGACCAACCCGATTATGTCAAATTGGTGAAAGCCCTTTGTGCAGAACATAATGTTAGTTTGCTGACAGTTCCAAGTGCATTGACACTTGGAAAATGA 660 0.397 MRGNGTMVGVVGLVGRSKVSVFEKGEVKKKKKKKKKMVKGCDLSKGYWVFDERYPLYGGASYPFVDEGFDCEGNGRLDRNFTKWRWQPQYCDLPRFNATKMLELIRGKKLVFVGDSINRNQWESMLCMLLSDVKDLQRVFEARGRKITKEKGNYSFRFLAGGLAGGLHEGAKVIEKHAAQLYTLVEDCDQPDYVKLVKALCAEHNVSLLTVPSALTLGK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi246g00030 219 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 37 158 IPR029962 GO:0016413
Vivi246g00030 219 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 161 219 IPR004038 -
Vivi246g00030 219 Pfam PMR5 N terminal Domain 40 92 IPR025846 -
Vivi246g00030 219 SUPERFAMILY L30e-like 158 219 IPR029064 -
Vivi246g00030 219 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 93 159 IPR026057 GO:0016740
Vivi246g00030 219 Gene3D - 159 219 IPR029064 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi246g00030 161 219 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 71.186 3.93e-23 89.4