Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi246g00010 ATGAATTTTCTTCACACTCTTCAAGGACCTAAAAAACCAAACCCTTCATTCATGGAGACACATAACCTTATCTTTCTAACCCTTCTCTTCTTTCTACCTTGTTCACTTTCCTTTGTTCCTATAGACAACTACTTGATTAACTGTGGATCACTCAACAATGCTTCACTCTTCAATAGAGTCTTCATGAGTGATTCAACCAACCCAGGCTTGAATTTTCTCTCTTCAGATGATTCCATTTCTCTCATAGACAAAAACCCATCTCCAAATTTGCAAACTTTGTATCATACAGCTAGAGTTTTTGTCACCACTGGGAGATACAGGTTTAATATGAAGAAAAATGGTACTCATTTGATTCGTTTTCACTTTTTTCCACTTAAAGCTCAGAGTTTTGACTTGAAGTCTGCAAAATTTAGTGTCTTTGTTAATGGAATTTCGATTATGAAAGATTTTAAGCCACCTGATGAGGTTCTGATTAAAGAGTTTATTTTGATGATTGAGTCAAACTTGCTTGAAATTTTGTTTAGACCCTTTGATTCAGGTTTTGGATTTGTAAATGCTGTGGAAGTGTTTACTGCTCCTGAAGATTTTGTTATAGATTATGGAACAAGGGTGGTTGGTCCTTCTGGTATGAAAGAGTACCAAAACATTTCATCTCAGGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTGTGAAAATAACTCCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATGAGGATTTTTTGGTTTTTAAGGGAGCAGCTAAACATGCAGTGAGTACTCATACACCTGATTATGAGAAGGGAGGCGTGACTCCGGAGATTGCGCCTGAAAATGTTTACATGACTGCTCAGCAGATGAATAGGGAAAACACGAGTTTAGCTTCAAGGTTTAACATAACATGGAAGTTTCCTGTGGCTTCTGAAGGTGTTCCGCATTTGATTCGGTTGCATTTCTGTGATATAGTTAGTACTTCTCTCAATTTGCTTTACTTTGATGTGTATATCAATAGTTACATTGCATATAAGGATCTTGATTTGTCATCGCTTACATTTCACACTCTTGCGTCACCGGTGTATGTGGATTTTGTTGCTAATTCGGACGATTCGGGTGCTATTGAAATAAGTGTTGGTCCTTCTGACCTTAGTAGTTCTATAAGGATTAATGCCATATTGAATGGTGCAGAGATAATGAAGATTGTCAACGATGTTGATAATACTAAGAATGTGCACAGGAGGAAACATTTATGGGTGCTGATAGGTTCAATTGTCGGAGGAATTGTTGTTTTGCTTTTGGTTGTAACTGTTTTTCTACTAGCTACCAAATGCAGGAAGAAGAAACCAAAAGAAACTATGGTGGGAAGTGTTGGATGGACGCCTCTGCGTATGTTCGGAGGGAGTTCTCTTAGTAGAACATCCGAACACGGTTCTTATGGATATCTTGGAATGAATATCCCTTTTGCTGATATACAATCAGCAACAAACAATTTCGATAGAAACTTGATTATAGGGTCTGGTGGATTTGGTATGGTTTACAAAGGAGTGCTTAGAGACAATGTAAAAGTTGCTGTCAAGAGAGGTATGCCAGGTTCAAGACAAGGCCTTCCGGAATTCCACTCTGAAATAACGATTTTATCGAAAATTCGTCATCGCCATCTTGTTTCATTAGTTGGTTTCTGTGAAGAAAATTCAGAAATGATACTTGTTTATGAGTATGTTGAAAGAGGTCCATTGAAAAAGCATTTATATGGGTCGTCGCGACAGCCACCTCTCAATTGGAAGCAGCGGCTTGAGATATGCATTGGTGCGGCCAGAGGCTTGCATTATCTTCACACTGGCTTTGCTCAAGGAATCATCCACCGCGACATCAAATCGACCAACATATTGGTCGACGAAGATTATGTGGCAAAGGTTGCTGATTTCGGTCTTTCGAGATCAGGGCCATGCATCAATGAAACGCATGTGAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCCGAGTATTACCGGAGGCAACAACTTACCGATAAATCGGACGTATACTCATTTGGAGTTGTTCTTTTTGAGGTTCTCTGTGGAAGACCTGCTGTTGATCCACAACTGACTAGAGAACAGGTGAATTTAGCAGAATGGGCTATTGAATGGCTGCAGAAGGGAATGCTGGATCATATTGTTGACCCTCATATAGTCAACGAGATCAAACCGAGATCGTTGAAGAAATTTGGCGAAACTGCAGAGAAATGTTTAGCTGAATATGGTGTTGATAGACCAACTATGGGTGATGTCTTGTGGAATTTGGAACATGCACTTCAGCTTCAAGAAAGTGAAATTCAAAGAGGAATACACGACGATAGCGGTGGTAGCGAAGCGGATTATGAAACAACAAGAACTATTCATGAAAACTCTAGCAGTAGAAGAATAGAGAGAGATTATGATAATGACTGTTCAAATGTTAGTACTAGCCAAGTGTTTTCCCAGCTCATGAATAATAACGGTAGATGA 2517 0.3905 MNFLHTLQGPKKPNPSFMETHNLIFLTLLFFLPCSLSFVPIDNYLINCGSLNNASLFNRVFMSDSTNPGLNFLSSDDSISLIDKNPSPNLQTLYHTARVFVTTGRYRFNMKKNGTHLIRFHFFPLKAQSFDLKSAKFSVFVNGISIMKDFKPPDEVLIKEFILMIESNLLEILFRPFDSGFGFVNAVEVFTAPEDFVIDYGTRVVGPSGMKEYQNISSQVLETIHRINVGGVKITPFNDTLWRTWIPDEDFLVFKGAAKHAVSTHTPDYEKGGVTPEIAPENVYMTAQQMNRENTSLASRFNITWKFPVASEGVPHLIRLHFCDIVSTSLNLLYFDVYINSYIAYKDLDLSSLTFHTLASPVYVDFVANSDDSGAIEISVGPSDLSSSIRINAILNGAEIMKIVNDVDNTKNVHRRKHLWVLIGSIVGGIVVLLLVVTVFLLATKCRKKKPKETMVGSVGWTPLRMFGGSSLSRTSEHGSYGYLGMNIPFADIQSATNNFDRNLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFHSEITILSKIRHRHLVSLVGFCEENSEMILVYEYVERGPLKKHLYGSSRQPPLNWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILVDEDYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWAIEWLQKGMLDHIVDPHIVNEIKPRSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEHALQLQESEIQRGIHDDSGGSEADYETTRTIHENSSSRRIERDYDNDCSNVSTSQVFSQLMNNNGR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi246g00010 838 Gene3D - 220 405 - -
Vivi246g00010 838 Gene3D - 43 193 - -
Vivi246g00010 838 MobiDBLite consensus disorder prediction 783 817 - -
Vivi246g00010 838 Gene3D Phosphorylase Kinase; domain 1 471 575 - -
Vivi246g00010 838 FunFam Putative receptor-like protein kinase 43 193 - -
Vivi246g00010 838 SUPERFAMILY Protein kinase-like (PK-like) 476 772 IPR011009 -
Vivi246g00010 838 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Vivi246g00010 838 Gene3D Transferase(Phosphotransferase) domain 1 576 794 - -
Vivi246g00010 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vivi246g00010 838 Pfam Protein tyrosine and serine/threonine kinase 505 701 IPR001245 GO:0004672|GO:0006468
Vivi246g00010 838 ProSiteProfiles Protein kinase domain profile. 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi246g00010 838 PANTHER OS07G0166700 PROTEIN 487 778 IPR045272 GO:0004714|GO:0006468
Vivi246g00010 838 FunFam Receptor-like protein kinase FERONIA 220 405 - -
Vivi246g00010 838 CDD STKc_IRAK 506 772 - -
Vivi246g00010 838 FunFam Receptor-like protein kinase FERONIA 576 791 - -
Vivi246g00010 838 Pfam Malectin-like domain 46 403 IPR024788 -
Vivi246g00010 838 SMART serkin_6 500 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi246g00010 838 FunFam receptor-like protein kinase FERONIA 468 575 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi246g00010 23 838 Receptor kinase-like Gene Family AT3G46290 46.476 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi246g00010 Malectin_like 1.5e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi246g00010 - - gmx:100801169 1284.63