Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi246g00003 ATGTCTTTACCTGGATTCCCAGGCGGTATGGGACCCTCTGATTTCCACGGCCGAGCAAACAATTTTTCCGGCAGATACAGCACACTTCCGTCAAACATGAACAACTATAACAACAATTTCTCAAACCCAACCACCACCACCTCCACCACCCAGAATTATCATAACCCTTTCTACCGAACCCAACAACAACAACAACAACAACTACCATCGAATTTTATCGACCCTTCCCAAATCGCACAAAATCGATCATCAAACCTGATCAGAAGATACCTTGACCCTGCTACCCAAATTGGATATAACCAAAATTCCACACTCAAACGTACACGAACCCTCGCTGAATATCAAACCCAATTCATCAACAACAACAACAACCTTAACAACAACAACAATAACCTTAACAACAACAATACCCTTAACAACAACGTTAGCGACACCCCTCCTACCCACAATTCAGCTAACCTTTATCTTTCAAACCTTGTACTTCATTCTGGAAGAGCTAGAAATTTCCTACAACGTGGTTCTCCTATGTCACCTCTTTCTCCGATGGATTACTCAAATTCATCAACTGAGTCTTCTTCCTCGGCTATTGCCACGCTTCTTCGCTCAAACCCTAGTGCTCAAAACCCATCACCCATGAACTATTCGAATTCGATCCCCCAGAATTCGAATTTTCAATATCAATATTCCAATTTTGCTGAGAATCAAACAACACTCCCTGACCCAGATAAGAAAATGCTGGATGAACAGTTAATGGAGATAGAAAAACAACTTCTGGAAGACATTGACAAAGAACAAGACCCAAATTGTATGATTGCAAACAGTGAATGGTATGAGACAATCCAGAATTTGATTAACTCCGAGCAAAACCCGATCCAGATACCCGTTTCTTCACCCTGTTCATCCAATAATTCATCTTCTCCCTCTGCTGTTTTACCTGCTGCGTTCTCTTCCAAGCAATGGTTAATGGAAGCCGCTAACGCAATTTCCGAAGGTAAAATCGATACTGCTTCGGAGATCCTGAATCGTTTGGCTCTGACACTGAATCCAGCAGCGAATTCTGATGGTAGATTAACATACTGTATCATCTCAGCGCTGAATTCCCGCGTGAATCATTTTGAGAATCCACCTCCAGTAGCGGAACTGTTCAGTAACGAACACGCTGAGGCTACTCAGCTTCTGTTCGATAATTCTTTCTGCTTCAAGCTCGCTATCATGACTGGTAACGTCGCTATCATCGAAGCTGCATTCGATGAAACAACAGCAGAGAACAGTTACCACAATATGATGAATCTTTGTGTGGTGGATTTTGACATTGGCCTTGGGAAAAGGTACAAGAGCCTTCTCTATGAGCTACACGCACGGCTCAATGGTTCACCGGCGACGCTGAAGATCACAGCTGTAGTCGATAACATCCACGACGAGAGGTTGAAGATGGTGGAAGAGAGATTGAGTCTACAAGCAGAGCTTTTGAGTATCGGGTTTGAATTCAATGTGGTGACACTGAACATCACCGAGCTGAGTCGCGAGTCATTGGGTGTCAACCCGGAGGATATTCTCGCTGTGAACTTCGCGTTCAAACTTTTCAGAGTGGCAGACGAAAGTGTGTCAACTGAAAATCCACGCGATGAGCTTCTCCGGCGCGTGAAGTCACTTTCCCCGCGTGTAGTAACTCTCTTAGAACAAGAGATGAATGCAAACACTGCCCCATTCGTTGCACGTGTGGCTGAGTCATTTTCCTACTACAACGCGCTGTTTGACTCAATTGAGTCAACAGTGGGAAAGGAAAGCTTGGAGAGAGTCAAGATTGAGGAGGGGCTTAGTCGGAAGCTGGGGAACATGATTGCTTGTGAAGGTAGAGATCGCGTGGAGCGGTGTGAAATGTTTGGAAAGTGGCGTGCACGGATGAGTATGGCTGGGTTTGGGTTGAACCCGGTGAGTCAGAAAGTGGCTGAGACGATAAAAGCGCGACTCGCACCAGGTTGCCGAGTCACTATGAAGGAAGAAAACGGTGGGGTTTTTTTTGGGTGGATGGGAAGGACACTAACCGTCGCATCTGCTTGGCTTTAA 2067 0.4519 MSLPGFPGGMGPSDFHGRANNFSGRYSTLPSNMNNYNNNFSNPTTTTSTTQNYHNPFYRTQQQQQQQLPSNFIDPSQIAQNRSSNLIRRYLDPATQIGYNQNSTLKRTRTLAEYQTQFINNNNNLNNNNNNLNNNNTLNNNVSDTPPTHNSANLYLSNLVLHSGRARNFLQRGSPMSPLSPMDYSNSSTESSSSAIATLLRSNPSAQNPSPMNYSNSIPQNSNFQYQYSNFAENQTTLPDPDKKMLDEQLMEIEKQLLEDIDKEQDPNCMIANSEWYETIQNLINSEQNPIQIPVSSPCSSNNSSSPSAVLPAAFSSKQWLMEAANAISEGKIDTASEILNRLALTLNPAANSDGRLTYCIISALNSRVNHFENPPPVAELFSNEHAEATQLLFDNSFCFKLAIMTGNVAIIEAAFDETTAENSYHNMMNLCVVDFDIGLGKRYKSLLYELHARLNGSPATLKITAVVDNIHDERLKMVEERLSLQAELLSIGFEFNVVTLNITELSRESLGVNPEDILAVNFAFKLFRVADESVSTENPRDELLRRVKSLSPRVVTLLEQEMNANTAPFVARVAESFSYYNALFDSIESTVGKESLERVKIEEGLSRKLGNMIACEGRDRVERCEMFGKWRARMSMAGFGLNPVSQKVAETIKARLAPGCRVTMKEENGGVFFGWMGRTLTVASAWL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi246g00003 688 Coils Coil 115 135 - -
Vivi246g00003 688 ProSiteProfiles GRAS family profile. 308 688 IPR005202 -
Vivi246g00003 688 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 249 679 IPR005202 -
Vivi246g00003 688 MobiDBLite consensus disorder prediction 173 195 - -
Vivi246g00003 688 MobiDBLite consensus disorder prediction 171 195 - -
Vivi246g00003 688 MobiDBLite consensus disorder prediction 33 53 - -
Vivi246g00003 688 Pfam GRAS domain family 319 687 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi246g00003 250 687 GRAS Transcription Factor Family AT5G52510 50.433 5.35e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi246g00003 GRAS 1.1e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi246g00003 - - tpra:123914170 726.472