Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi244g00006 ATGGCGACAGAGCCAGAGCCAGAGCCAGCTTTGCCATTCTCACTTGTATCCGTTGTTGAAGACGTTATTCAAAAACATGGAAGTAGTTTAAGCGATATCAATTTGGCTACAAGAAAAGCTCAAGAAGCTTCTTCAAGAAGGAATGGAGCAGCTACTTGGCTGCGAAATACAGTTGGAAACGTCGGAGGAAAAGAGATGGTGGATGAACCTTCTGAACAAGATTTCAGAATTGCATTGCGAAGTGGCATTATCCTTTGCAATGCTCTCAACAAAATTCAACCTGGAGCTGTTCCCAAGGTAGTTGAAGCCCCGAGTGACATTGATAACATTCCTGATGGGGCAGCGCTGTCTGTTTATCAATACTTTGAAAATGTAAGGAATTTTCTAGTAACTGTGGAGGAGATGGGGCTTCCAACATTTGAAGCTTCTGATTTGGAGGAGGGAGGGCAATGTTCGAGGATAGTGAATTGTGTTTTAGCACTTCAATCGTATAGTGAATGGAAAATGGGAGGTAAAAATGGATTGTGGAAATATGGTGGGAATCCCAAACCACGTAGCTTTGAGAAACCAGTTGTGAGGAAACGCTCAGAACCATTTACGAGGTCTTTGTCAAGAGCTAAGTCAATAGGCGACAAAGATAGTTCGCCGGGTGATCACTCTTTTAACATTGATGCTGTACTGCCTGATCCCAGTGAAGGGAGTTCTATTCCTTCAGTGTATTCACTAATTCGTGAAATTTTGCATGATAAGAAGCAAGAAGAAATTCCAATTATAATGGAATCTCTGCTTAGTAAAGTCATGGAGGAGTTTGAAAGTCGCGTGCTCACCATACAGCAACAAACATCTATAACACCCCGAGAAGATAAGGCACCATCTAAAGCATTGAATTCAAATTTAAAAGTTGTTGATGGTGATGAAGAGGTAAAAAATGATGATGTAGATGGTGTGAAGCACAATGGCAGTGAAGAATCAAGTAGCCAGCTTTTGAAGCATCAAAACTGCCAAAACATAATTCAAAGGCAAAATGAAAACATCCAGGAATTGAAAATGATTGTTCATCAAACAAAAGAAGGAATGCACTGTCTACATAAAAAATACAGGGAGGATTTCGTCTATCTAGCTAAGCATCTGAATAGCTTAGCTTCTTCTGCTTCAGGATATCAGAAAGTTCTAGAAGAAAACCGCAAGTTATACAATCAGATGCAGGACTTGAAAGGAAATATTAGAGTGTACTGTAGAGTTCGCCCCTTAAAAGGGCAACCAAACAATCGTGGCATTGTTGGTAATGTAGAAGAAGAAAGTCTTTCACTCATAATGCCTTCTAAGAATGGAAAAGAGGCGAAGAAGATATTTACTTTTAACAAAGTGTTTGGTCCTTCTGCAACTCAAGTGGAGGTTTTCTCAGATATACAACCTCTGATTCGTTCAGTTTTGGATGGATTCAATGTTTGTATATTTGCCTATGGCCAGACAGGCTCAGGAAAAACACACACCATGTCTGGACCAGACAATATTAGCGAGGACACAGTTGGTGTCAACTACCGCGCTTTGAGGGATCTTTTCAATCTTTCAGAACAACGGAAAGACACAATTCACTATGATATCTCTGTCCAAATGCTTGAGATATACAATGAGCAAGTGAGAGACCTGCTAATGATTGATGCTTCTAATAAAAGATTAGAAATTCGCAACAGCTCCCATAATGGTATTAATGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACAGCCGATGTCTTAAATTTGATGAACTTGGGGCAAAGGAATCGGGCAGTTAGTGCTACTGCGATGAACAATCAAAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTACGTCAGGAAATAGTCTACGTGGATGTATCCACCTAGTTGATTTGGCTGGAAGTGAGAGGGTTGATAAATCTGAGGTCATAGGAGATAGGCTAAAGGAGGCTCAACATATTAACAAGTCGCTTTCCGCTTTAGGAGATGTAATTGCTTCCCTTGCCCAAAAGCAACCACACGTTCCTTACCGAAACAGTAAACTTACTCAGTTGCTTCAGGACTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATATTAGCCCGGAGCCTGAAGCTCTTGGAGAAACTATTAGTACACTTAAGTTTGCTGAAAGGGTCTCAACTGTTGAACTTGGTGCCGCAAGGGTTAATAAAAGTAGCAGCGAAGTGAAAGAGCTGAAGGAACAGATTGCTAGTCTACAGGCCACATTAGCAAGGATGAAGGATGGAGAGTTGGATAACTTTAAACATCCTGCAAATAGCATCACTGACATGACAAGGTCAACATCTCAATTGTCTTTCCTTGCCCCAACTAGTTGGACTTCCGGAGCTCGTAAGTTACCAAGAGATGATTCTAATAGCATCGAGGACCCTAAAAAGGCTGCATCCAAGCTGAAAATACAAAGCCTTGATCCTGAAGACATATATATGAATTTACCTACATGGCCACATCCACATGCTGGGGTACATGGAAATGAGGATGACAGAGAATCAGTTTCTTGTAGAAGTATGAATAGGGATAAGAGCTTCACAACTGATGATAGCCTCACTGGACAGTCGGAAATAGAAAGCAAACATTCTCCATTGTTAAGTCCCTCATATCTTTCAGACCCTTCAAAAATATGTATGGAGGTGGCCACCACACCCACAAATGACTATGATGAGCTTGAGTTAGCAACTAGTGAATGTTCAGAATCAGACATGAGTTGGCAATCTCATTCATCCAAAACAACCGCCATCTCCAATGCATTAGTGTCTAGACCAAAGAAATCAGTTCATCTCAAACAAGCAAAGAACTTCGAAACCAGGAGTATGCTCCCGTCGTTGACTCCTTCATCGCCAAGGAAACAACCTACATTAGTTAGTCAACCAAGAAAGCATTCAGGTTCAGTTTCTGCTAAAAGAAGAAGTGGAAATGCCAAGTGA 2994 0.4122 MATEPEPEPALPFSLVSVVEDVIQKHGSSLSDINLATRKAQEASSRRNGAATWLRNTVGNVGGKEMVDEPSEQDFRIALRSGIILCNALNKIQPGAVPKVVEAPSDIDNIPDGAALSVYQYFENVRNFLVTVEEMGLPTFEASDLEEGGQCSRIVNCVLALQSYSEWKMGGKNGLWKYGGNPKPRSFEKPVVRKRSEPFTRSLSRAKSIGDKDSSPGDHSFNIDAVLPDPSEGSSIPSVYSLIREILHDKKQEEIPIIMESLLSKVMEEFESRVLTIQQQTSITPREDKAPSKALNSNLKVVDGDEEVKNDDVDGVKHNGSEESSSQLLKHQNCQNIIQRQNENIQELKMIVHQTKEGMHCLHKKYREDFVYLAKHLNSLASSASGYQKVLEENRKLYNQMQDLKGNIRVYCRVRPLKGQPNNRGIVGNVEEESLSLIMPSKNGKEAKKIFTFNKVFGPSATQVEVFSDIQPLIRSVLDGFNVCIFAYGQTGSGKTHTMSGPDNISEDTVGVNYRALRDLFNLSEQRKDTIHYDISVQMLEIYNEQVRDLLMIDASNKRLEIRNSSHNGINVPDANLVPVSSTADVLNLMNLGQRNRAVSATAMNNQSSRSHSCLTVHVQGRELTSGNSLRGCIHLVDLAGSERVDKSEVIGDRLKEAQHINKSLSALGDVIASLAQKQPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETISTLKFAERVSTVELGAARVNKSSSEVKELKEQIASLQATLARMKDGELDNFKHPANSITDMTRSTSQLSFLAPTSWTSGARKLPRDDSNSIEDPKKAASKLKIQSLDPEDIYMNLPTWPHPHAGVHGNEDDRESVSCRSMNRDKSFTTDDSLTGQSEIESKHSPLLSPSYLSDPSKICMEVATTPTNDYDELELATSECSESDMSWQSHSSKTTAISNALVSRPKKSVHLKQAKNFETRSMLPSLTPSSPRKQPTLVSQPRKHSGSVSAKRRSGNAK 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi244g00006 997 PANTHER KINESIN-LIKE PROTEIN KLP-3 51 946 IPR027640 GO:0003777|GO:0007018
Vivi244g00006 997 MobiDBLite consensus disorder prediction 309 329 - -
Vivi244g00006 997 ProSiteProfiles Kinesin motor domain profile. 407 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi244g00006 997 Coils Coil 739 766 - -
Vivi244g00006 997 MobiDBLite consensus disorder prediction 938 997 - -
Vivi244g00006 997 SUPERFAMILY Calponin-homology domain, CH-domain 52 187 IPR036872 -
Vivi244g00006 997 Gene3D Kinesin motor domain 402 772 IPR036961 -
Vivi244g00006 997 MobiDBLite consensus disorder prediction 832 889 - -
Vivi244g00006 997 CDD CH_AtKIN14-like 46 163 - -
Vivi244g00006 997 FunFam Kinesin-like protein KIN-14I isoform A 402 775 - -
Vivi244g00006 997 MobiDBLite consensus disorder prediction 799 818 - -
Vivi244g00006 997 SMART kinesin_4 405 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi244g00006 997 SMART ch_5 46 164 IPR001715 GO:0005515
Vivi244g00006 997 MobiDBLite consensus disorder prediction 866 889 - -
Vivi244g00006 997 Gene3D - 36 167 IPR036872 -
Vivi244g00006 997 Pfam Calponin homology (CH) domain 46 165 IPR001715 GO:0005515
Vivi244g00006 997 MobiDBLite consensus disorder prediction 957 997 - -
Vivi244g00006 997 Coils Coil 387 407 - -
Vivi244g00006 997 Coils Coil 331 351 - -
Vivi244g00006 997 Pfam Kinesin motor domain 413 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi244g00006 997 MobiDBLite consensus disorder prediction 198 218 - -
Vivi244g00006 997 CDD KISc_C_terminal 405 734 - -
Vivi244g00006 997 MobiDBLite consensus disorder prediction 198 233 - -
Vivi244g00006 997 PRINTS Kinesin heavy chain signature 602 619 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi244g00006 997 PRINTS Kinesin heavy chain signature 633 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi244g00006 997 PRINTS Kinesin heavy chain signature 682 703 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi244g00006 997 PRINTS Kinesin heavy chain signature 480 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi244g00006 997 MobiDBLite consensus disorder prediction 844 865 - -
Vivi244g00006 997 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 731 IPR027417 -
Vivi244g00006 997 ProSiteProfiles Calponin homology (CH) domain profile. 44 166 IPR001715 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi244g00006 395 754 Calmodulin-binding Proteins AT5G65930 41.484 2.65e-77 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi244g00006 K10406 - gmx:100808197 1280.77