Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi242g00038 ATGGACTCAGATTGGGATCTATATGCTGTTGTCAGAGGCTGCACCACCTCAACCTCCACCACCACCTCCACCACCGCCACCGCCGCCGCAACAACAACAACAACCAGTACTACTACTACTATACCTTCTTCATCTTATTTCTCTATTTACCCTGCTGAACAATCAGGCCAAGTTTTATCAATTTCAAACCCTTATGAACAATCAACAAGTTCTGTAGAATTGCATGAACTTTGTAAACCTTTCTTCATCAAATCACAACCTCTCTCTTCAAATTCATTCTCTTATTCATCACCATCACCAAAATCAACAGGTCAAACAAAACAACAGCTGCTTAATAATAATAAGCAGCCTCATCATAGCGGTTCTGCTACAACACCAAGATCTAAAAGAAGAAAGATTCAGCATAAGAAGGTTTGTGAAGTACAAGCTGAGAATCTTTCATCTGACATATGGGCATGGAGGAAATATGGTCAAAAACCCATCAAAGGTTCACCATATCCAAGAGGATATTATAGATGTAGCAGTTCAAAAGGGTGTTTAGCTAGAAAACAAGTTGAGAGGAACAAATCAGACCCAACAATGTTCATAGTAACATACACTGGCGAACATAGTCATCCTGCTCCAACTCATAGGAATTCTCTAGCCGGTTCGACGCGACAGAAGCCTTCGTCACCGCAAACTGTCACGGCTGAAGACTCTTCTCAGCCTTTTACAAAACAAGCTTCTCCGTTGACATCGGAAGCTGAAGAGGAAGAGGCTACTCCTTCGAAGTCGGAAAGTAGAGAGGATTTGGAAGATTTGATGAATGATGATGAGGAAAATGAATTTGAGGTATCTGATATGGTTGTAACAGATGATTTCTTTGAAGGTTTAGATGAATTGACAGGATTTGCTGGAAAAACAGTAGCTTCATCTGGTGGTGGTGACTGTTTTGGTGACCCTTTTGCAGCTAGTATTGCACTTCCTGCTTGTGGTGGCCAATAA 984 0.4146 MDSDWDLYAVVRGCTTSTSTTTSTTATAAATTTTTSTTTTIPSSSYFSIYPAEQSGQVLSISNPYEQSTSSVELHELCKPFFIKSQPLSSNSFSYSSPSPKSTGQTKQQLLNNNKQPHHSGSATTPRSKRRKIQHKKVCEVQAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNKSDPTMFIVTYTGEHSHPAPTHRNSLAGSTRQKPSSPQTVTAEDSSQPFTKQASPLTSEAEEEEATPSKSESREDLEDLMNDDEENEFEVSDMVVTDDFFEGLDELTGFAGKTVASSGGGDCFGDPFAASIALPACGGQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi242g00038 327 MobiDBLite consensus disorder prediction 201 276 - -
Vivi242g00038 327 MobiDBLite consensus disorder prediction 250 264 - -
Vivi242g00038 327 FunFam WRKY transcription factor 22 131 201 - -
Vivi242g00038 327 MobiDBLite consensus disorder prediction 93 123 - -
Vivi242g00038 327 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 295 IPR044810 GO:0003700
Vivi242g00038 327 MobiDBLite consensus disorder prediction 205 249 - -
Vivi242g00038 327 Gene3D WRKY domain 131 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi242g00038 327 SUPERFAMILY WRKY DNA-binding domain 144 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi242g00038 327 ProSiteProfiles WRKY domain profile. 142 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi242g00038 327 SMART WRKY_cls 147 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi242g00038 327 Pfam WRKY DNA -binding domain 149 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi242g00038 327 MobiDBLite consensus disorder prediction 93 136 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi242g00038 1 305 WRKY Transcription Factor Family AT4G01250 47.937 6.10e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi242g00038 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi242g00038 K13425 - gmx:100798084 330.872