Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi242g00014 ATGACCACCACATTCGTCCACAACCGGAGCCAGCACTCCAGCCACCGCGCAACGCCGGATAACATGTCCCGTTCGTCGGACTTCAGCACTTCGAATCAATCGACCTCGTCTTCTTCCGGACGGAATCCAGTTGTTGCTGCCGCTTTGTCGGTTGCCGGATTGTTCGCTGCTTGCTTCACGCCGCCGGAGGCTAATAATTCCAAGAGTCTTGTGGTGGATTCTGAGGAGTTCAAATCTTCTTCTGGTTCTGTTGCATCAAATGCTTCAAGAGGAGGTAGTCAGAGAGGGCGAGGTACAAACAACAGTTTATACAACACCACAATCCAGGGGAATGAGTCTGGCATTGTGAAGTATACATTGGAGGAAATCATCCAAGTCACCAAAAACTTCTCGCCTTCTTTCAAGATTGGTCAAGGTGGTTTTGGGGCAGTCTACAAGACGAAACTTCTGGATGGAACTATTGTCGCAGTAAAGCGAGCTAAGAAGAGTGTACACGAGAAACATCTAGGTTCGGAGTTCCAGAGCGAGGTACAAACACTATCACGGGTCGAGCATTTGAACTTGGTAAAGTTCTATGGATACTTGGAGCATGGGGATGAAAAAATTGTTGTTGTGGAGTATGTTCCGAATGGAACCCTCAGAGAACATCTAGATTGCATTCATGGAAATGTTCTCGACCTCGCCGCTCGTCTAGACATTGCAATTGATGTATCTCATGCTCTCACCTATCTTCATGTGTATATGGATCACCCCATCATTCATAGAGACATAAAGTCTTCCAACATTCTCCTCACTGAGAACTTTCGAGCAAAGGTAGCAGACTTTGGTTTTGCTAGACAAGCACCAGACAGTGACTCTGGCATGACACACGTCTCTACCCAAGTTAAGGGAACAGCTGGCTACTTGGATCCTGAATACTTAAAAACCTATCAACTGACCGAAAAGAGTGACGTCTATTCATTTGGTGTTTTGCTTGTTGAACTTGTCACAGGAAGACGCCCGATTGAACCAAAATTTGAACTCAAAGAGAGAATAACAGTAAAATGGGCTATGAAGAGGTTTATCGAGGGAAACGCGATCTCGGTCTTGGACCCAAGACTGGATCAAACTTCTGCAAATAATTTGGCCTTAGAAAAGATACTTGAACTAGCTTTACAGTGCTTGGCTCCTCATAGGCAAAGCAGGCCTAGCATGAAGAGATGTGCAGAGATCCTTTGGGCCATTCGTAAGGATTATCGAGAGATATCGGCTTTAAACTTTCGATCATATTCCACTACTTCCCAAAGAAGCACCTCATTGTGA 1302 0.4547 MTTTFVHNRSQHSSHRATPDNMSRSSDFSTSNQSTSSSSGRNPVVAAALSVAGLFAACFTPPEANNSKSLVVDSEEFKSSSGSVASNASRGGSQRGRGTNNSLYNTTIQGNESGIVKYTLEEIIQVTKNFSPSFKIGQGGFGAVYKTKLLDGTIVAVKRAKKSVHEKHLGSEFQSEVQTLSRVEHLNLVKFYGYLEHGDEKIVVVEYVPNGTLREHLDCIHGNVLDLAARLDIAIDVSHALTYLHVYMDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITVKWAMKRFIEGNAISVLDPRLDQTSANNLALEKILELALQCLAPHRQSRPSMKRCAEILWAIRKDYREISALNFRSYSTTSQRSTSL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi242g00014 433 Gene3D Transferase(Phosphotransferase) domain 1 208 426 - -
Vivi242g00014 433 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 208 419 - -
Vivi242g00014 433 CDD STKc_IRAK 136 405 - -
Vivi242g00014 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Vivi242g00014 433 Gene3D Phosphorylase Kinase; domain 1 92 207 - -
Vivi242g00014 433 MobiDBLite consensus disorder prediction 1 41 - -
Vivi242g00014 433 PANTHER OS01G0750732 PROTEIN 28 413 - -
Vivi242g00014 433 ProSiteProfiles Protein kinase domain profile. 130 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi242g00014 433 SMART serkin_6 130 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi242g00014 433 ProSitePatterns Protein kinases ATP-binding region signature. 136 162 IPR017441 GO:0005524
Vivi242g00014 433 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 88 207 - -
Vivi242g00014 433 SUPERFAMILY Protein kinase-like (PK-like) 112 408 IPR011009 -
Vivi242g00014 433 Pfam Protein kinase domain 135 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi242g00014 433 MobiDBLite consensus disorder prediction 81 105 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi242g00014 97 408 Receptor kinase-like Gene Family AT1G30570 43.269 2.09e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Vivi242g00014 Pkinase 6.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi242g00014 - - cam:101500599 692.189