Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi242g00009 ATGTCACTCCTTTCCCTTTTCTTCTTACTACTCTTCTCTAACTTCACTCTTTTCACTTCTTCAACTTCCCCCAACAACAACAACAACAACAACTCAAACATTATCATTTTAACCGGAAACCAAACCCTCCTTAGCCAAAACAAAACCTTCGAACTCGGTTTCTTCAACTTAGAACAATCCCAACTAAACCAACCTCGTATTTACCTCCTCATCCGTTTCACTTCTCTCCCTTCCCCAAACATAACCTGGCTCGCGAACCGGAACAAACCCGCCCCATCTCTCTCCGGTTCATCTCTCCAATTAACCCGAACCGGTCAATTACTCATCACTCACAACGACACCGTTTTATGGCAAACCAACACCACCACCAAAACCACCCCACAACAAACTCTCCAACCGAACCTTCTAGAAAACGGTAACTTAATCCTCACCACCCTCAACGGCGTCGTTTCATGGCAAAGCTTCGACGAACCCACCGACACGTGGCTCCCTGGTATGAACCTCACTAGGGTTCACAGCCTTCTCTCATGGCGGACGGTAACTAACCCTGCCGACGGGTTTTATTCTCTGCGGTTGAATCCACCGGACTACGGTGAGTTCGAGCTTGTTTACAACGACACCGTTTCGTATTGGGCCACCGGTGAGTGGAATGGCAAGAAATTTGAAAAAGTTCCTGAGATGGATATTCCGTATCTTTACCGATTCAATTTCGAAGACGCGTATTCTCCGAAAGCGTCGTTTGGATTCTCTGAACGAGCTATTGACAATGATGTTGGACCTCCTACCATGTTCCGTGTTGAAGCGAATGGTTTGGTTCGGCAGTTCACGTGGTCGAGTCAGATGGGTGCTTGGAATATGTTTTGGTCTAGGCCGGAATCGGTTTGTTCGGTTCCGCGTGTTTGTGGGAGGTTTGGGGTTTGTATCAGCGAGGCGCCCTTGAGTTGTGCGTGTGTTAAGGGTTTTGTGGCGGTTGATGGTGGTGGTTGGGGGGCTGGTGATTATTCGCAAGGGTGTTGGCGCGGGGAGAGTGGTTGTGGTAATGATGGGGTTTTTGAAGAGATGGGGGCTTTTAAGTTTGGTTTTGATAATGTGACTAGTTTTGGGGCGAAATCTAGAAGTTTATGTGAGCGTCGGTGTTTGGATTCTTGTGATTGTGTTGGTTTTTCTTTTGATGGAAAGAGTGGTTTTTGTAGGAATTTTCTTGGGTCTCTTTTTGATTTTCAGAATTTGACTTCTTTGCAGAGTGGTGATGGGAATGTGTTGTATGTTAAGGTGAATCGGGGGAAGAACAAGAGGTTGAGTGGTAGGTTTTTGAGTGGTGTTGTTATTGGGTGTGTTTTGTTTTTGGTTTTGATTTTGGGTGTTGTGACGGTGACTTTGGTGGTGTTGGCGAAGAGGAAGAGATTGAAGAAGGAGAGGGAGATGGGTTTGGAGGAAGATGGATTTGTTCAGATGTTGAATTTGAAGGTGTTTTCTTACAAAGAGCTTCAATTGGCGACTCGAGGGTTTTCTGAGAAAGTTGGGCATGGTGGATTTGGGACGGTGTTTCAAGGAGAGTTGAGTGATTCTACCGTTGTTGCGGTGAAGCGGTTGGAGAGGCCGGGAGGTGGGGAGAAAGAGTTTAGGGCTGAGGTTTCAACGATTGGGAATATTCAGCATATTAATCTTGTGAGGCTGAGAGGTTTTTGCTCTGAGAATGCACATCGACTTTTGGTTTATGAGTACATGCCGAATGGTGCCCTTAGTGCTTACCTGCGAAAGGAAGGGCCGTGTTTGAGCTGGGATGTTAGGTTTAGGGTAGCAATTGGAACTGCGAAAGGCATAGCATATTTACACGAGGAATGTAGAAGTTGCATAATACATTGTGATATTAAACCTGAAAACATTCTTTTGGATAGTGATTTCACTGCCAAAGTTTCTGATTTTGGGTTGGCAAAGCTCATTGGCAGGGACTTCAGTAGGGTGTTGGCAACCATGAGGGGTACTTGGGGATATGTAGCACCCGAGTGGATTTCCGGTGTTGAAATTACCACAAAAGCTGATGTTTACAGCTACGGAATGACATTGCTAGAACTCCTAGGCGGTCGCCGGAATGTTGAGGCACCACCTTCGTCTGGTAATAAAAAGAGTGACTGCGAGACAGGAGAGAAATGGTTCTTTCCTCCATGGGCGGCACAGCTGATAATCGACGATAATGTAGCTGCTGTGGTTGATAAGAAGCTTGGAAATGTATATAACATTGAGGAGGCCAAGAGGGTTGCTTTGGTGGCAGTTTGGTGCATTCAGGATGATGAGGCAGTGAGACCTAGCATGGGTATGGTGGTGAAAATGTTAGAAGGGTTAGTGGACGTGGCTCTTCCACCGCCTCCTAAGTTGCTACAAGCCTTGGTTACCGGAGAGTCCTTTCACGGGGTCAAGGCTTATTCGAGTAACGCAGTTTCTACTACCGGCAGTTCATTTGCTGACGACAACATGGAAGTGTCGGCTGCTGATTCAGAATCTTGTATAGGAGATGTTTTTTCCCCATTGGACGGCATTGTCAATGTTCGATAG 2553 0.4638 MSLLSLFFLLLFSNFTLFTSSTSPNNNNNNNSNIIILTGNQTLLSQNKTFELGFFNLEQSQLNQPRIYLLIRFTSLPSPNITWLANRNKPAPSLSGSSLQLTRTGQLLITHNDTVLWQTNTTTKTTPQQTLQPNLLENGNLILTTLNGVVSWQSFDEPTDTWLPGMNLTRVHSLLSWRTVTNPADGFYSLRLNPPDYGEFELVYNDTVSYWATGEWNGKKFEKVPEMDIPYLYRFNFEDAYSPKASFGFSERAIDNDVGPPTMFRVEANGLVRQFTWSSQMGAWNMFWSRPESVCSVPRVCGRFGVCISEAPLSCACVKGFVAVDGGGWGAGDYSQGCWRGESGCGNDGVFEEMGAFKFGFDNVTSFGAKSRSLCERRCLDSCDCVGFSFDGKSGFCRNFLGSLFDFQNLTSLQSGDGNVLYVKVNRGKNKRLSGRFLSGVVIGCVLFLVLILGVVTVTLVVLAKRKRLKKEREMGLEEDGFVQMLNLKVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTVVAVKRLERPGGGEKEFRAEVSTIGNIQHINLVRLRGFCSENAHRLLVYEYMPNGALSAYLRKEGPCLSWDVRFRVAIGTAKGIAYLHEECRSCIIHCDIKPENILLDSDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVEITTKADVYSYGMTLLELLGGRRNVEAPPSSGNKKSDCETGEKWFFPPWAAQLIIDDNVAAVVDKKLGNVYNIEEAKRVALVAVWCIQDDEAVRPSMGMVVKMLEGLVDVALPPPPKLLQALVTGESFHGVKAYSSNAVSTTGSSFADDNMEVSAADSESCIGDVFSPLDGIVNVR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi242g00009 850 Gene3D Phosphorylase Kinase; domain 1 474 575 - -
Vivi242g00009 850 CDD STKc_IRAK 507 781 - -
Vivi242g00009 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Vivi242g00009 850 SMART serkin_6 501 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi242g00009 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 217 IPR036426 -
Vivi242g00009 850 PANTHER OS07G0415500 PROTEIN 4 791 - -
Vivi242g00009 850 Pfam Protein kinase domain 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi242g00009 850 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Vivi242g00009 850 ProSiteProfiles Protein kinase domain profile. 501 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi242g00009 850 FunFam S-receptor-like kinase 5 576 787 - -
Vivi242g00009 850 ProSiteProfiles Bulb-type lectin domain profile. 28 156 IPR001480 -
Vivi242g00009 850 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Vivi242g00009 850 SUPERFAMILY Protein kinase-like (PK-like) 485 779 IPR011009 -
Vivi242g00009 850 CDD B_lectin 36 158 IPR001480 -
Vivi242g00009 850 CDD PAN_AP_plant 343 425 - -
Vivi242g00009 850 Pfam D-mannose binding lectin 81 170 IPR001480 -
Vivi242g00009 850 SMART blect_4 36 158 IPR001480 -
Vivi242g00009 850 Pfam S-locus glycoprotein domain 211 323 IPR000858 GO:0048544
Vivi242g00009 850 Gene3D - 27 155 IPR036426 -
Vivi242g00009 850 PIRSF SRK 1 832 IPR024171 GO:0004674
Vivi242g00009 850 FunFam Receptor-like protein kinase 4 462 575 - -
Vivi242g00009 850 Gene3D Transferase(Phosphotransferase) domain 1 576 785 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi242g00009 491 788 Receptor kinase-like Gene Family AT5G20050 47.267 5.45e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi242g00009 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi242g00009 - - lja:Lj0g3v0252549.1 1137.48