Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi241g00023 ATGAATGGAGTTACACACTTTGAAGAAGATGACTCTGAGTTTGTTGAACTTGATCCAACTGGTAGATATGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCAAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAATCAGGTCAAGCTTTATGATTTCCTTCAAAGTCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCTTGAAAACATTGAAGCACAAAAACATTATGAAATTTTACACCTCTTGGGTTGATACTGCTAATAGGAATATCAACTTTGTTACTGAAATGTTCACCTCTGGTACACTTAGACAGTATAGGTTAAGGCACAAGAGAGTTAACATAAGAGCAGTGAAGCATTGGTGCATACAGATCCTGAGAGGACTTCTGTATCTACATAGCCATGACCCGCCAGTGATCCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGAAATCAAGGGGAAGTCAAAATCGGGGATCTTGGTCTTGCTGCAATTCTTCGAAAATCACATGCTGCACATTGTGTAGGAACGCCCGAGTTCATGGCTCCTGAAGTATACGAAGAGTCTTATAATGAACTAGTTGACATATATTCCTTTGGTATGTGCTTATTAGAGATGGTCACATTTGAATATCCCTATAGCGAATGTACTCATCCGGCTCAAATATACAAGAAAGTTATTTCTGGTAAAAAGCCGGATGCTTTGTATAAAGTCAAGGATCCAGAAGTGCGGCAATTTGTTGATAAATGCTTGGCCACAGTGTCTCTAAGGCTTTCTGCAAAGGAGCTTCTAGACGACCCTTTTCTTCAAATAGATGATTATGAATATGATTTGAGACCTGTAGATAGTGGAGAATTCGACGACTTCGTTCCCCTCATCAGACATCCGCTTTTTGATTTTCATCGGAGCAATAGTAACTTCAGTAATGAATACTCCAATGGTTTTGGATATGAAGGAGACTCGTATTCTCATCCAGCTGACAATGAACATTGTGGAATTGAACTTTTCGAGCACCATGAAGATGAACCCTTTGAACATGTCGACATAAGTATCAAGGGCAAGAAGAAAGACGACGGTAGCATATTTTTGAGACTCAGAATTTCCGATAAAGAAGGCCACGTTCGGAATATTTATTTCCCATTTGACATAGAGATGGACACGGCAATAAGCGTAGCGACTGAGATGATCGCAGAACTTGACATAACGGATCAGGATGTTACCAGCATAGCGGATATGATAGATGGAGAAATCGCTTCTTTGGTACCTGAATGGCAATCAGGACCAGGAATAGTCGAAACTCCCCGTTTTGCAGATCAAGGCTTCTGCCGCAATTGTGTGTCGAATCATACTTCAAGTGGCTCCCTCATGGATTACCTTTCGCATAATCAGGGTAACTTGCAACTTCCTGAATATTGTAAGCACGGATGTGCCTCGATGCACGGCCGGTTCGAGGAGATTACTTTTCCATCCGAGGAGTGTGACAATCATGTTAGAGAGAATCTCAACGTATTAAACCTATCGGACAGTTTGCAGTATCAGGAGGTATGGAATCAGCACGAAAGCCGTGAACTGAGTCCGGTGGAATCTGATCAAAGTCATTCGGACGAACAAAATGAACAATTAGATAAATCAATGTCAGCTGAAGATCAAGGACAGAATGTTTCAGAAAATAAGTTTCCCCCGAATTCAACAATTTCTCCAAGATACTCATCCGGAACGCATGATTTCTCCAATATCCGTTCGTTATATTGCAGTCTCAACAATAATTATGAGAAAGAGATTCAAAAGGAACTTAGATGGCTCAAAGCAAGATACCAAATGGAGTTAAGGGAACTTAAGGATCAACAACTCGGGATAACAGATAATAAATCTTCTCATAAAACAGATTACGCCGTCATAAAAGGAGGAATCAACAGAATTCGGTCGAGACCTGTTCATAAAAGCAGCCCCGATTCTGACACTGAAAGAGCCGGAAATTGTGAGGCGATGGAGTCCCCTGCAGAAGGCATGGTTACTGCAAAGAGTTTTTATACCGGCTCGTTGCTTCCGCATCCTCTGCACAGGACAGTTTCACTCCCTGTGGATGCTTTTGATATATAA 2136 0.4096 MNGVTHFEEDDSEFVELDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLRHKRVNIRAVKHWCIQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCLLEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVDKCLATVSLRLSAKELLDDPFLQIDDYEYDLRPVDSGEFDDFVPLIRHPLFDFHRSNSNFSNEYSNGFGYEGDSYSHPADNEHCGIELFEHHEDEPFEHVDISIKGKKKDDGSIFLRLRISDKEGHVRNIYFPFDIEMDTAISVATEMIAELDITDQDVTSIADMIDGEIASLVPEWQSGPGIVETPRFADQGFCRNCVSNHTSSGSLMDYLSHNQGNLQLPEYCKHGCASMHGRFEEITFPSEECDNHVRENLNVLNLSDSLQYQEVWNQHESRELSPVESDQSHSDEQNEQLDKSMSAEDQGQNVSENKFPPNSTISPRYSSGTHDFSNIRSLYCSLNNNYEKEIQKELRWLKARYQMELRELKDQQLGITDNKSSHKTDYAVIKGGINRIRSRPVHKSSPDSDTERAGNCEAMESPAEGMVTAKSFYTGSLLPHPLHRTVSLPVDAFDI 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi241g00023 711 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Vivi241g00023 711 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Vivi241g00023 711 MobiDBLite consensus disorder prediction 533 555 - -
Vivi241g00023 711 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi241g00023 711 Coils Coil 607 627 - -
Vivi241g00023 711 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 636 - -
Vivi241g00023 711 CDD STKc_WNK 22 281 - -
Vivi241g00023 711 MobiDBLite consensus disorder prediction 556 583 - -
Vivi241g00023 711 Gene3D - 371 438 - -
Vivi241g00023 711 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Vivi241g00023 711 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
Vivi241g00023 711 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Vivi241g00023 711 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi241g00023 711 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi241g00023 711 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
Vivi241g00023 711 MobiDBLite consensus disorder prediction 531 583 - -
Vivi241g00023 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi241g00023 1 498 MAP Kinase Kinase Kinase AT3G22420 58.487 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vivi241g00023 Pkinase 6.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi241g00023 K08867 - gmx:100272198 1168.68