LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi241g00017	ATGTTTTCACCATTGGTTTCTTGGATTTTGTCAACCTCATCTTCTTCCTCATCATCATCATCATCAGAAGAAGAACATGACCCTGAAAATCTTGACACTAGCAATGACGAATCAGACTACGAAAACTTTCAAACCGACAATGTTGAAGACCAAATCGACGATGTGGACGATGAGAATATTGATGACACCATTCCCATTGGACTTGCCATTTCTGATGCCTCCCCCGCGGTAACGGTTGCCTTGCCTGCCCCCACAGATTACACAAACATTTCCACCACTTCTAAAGAATCGCGCTCCAAACGACAACACAACAAGTATTCTGGTGGGGTGAGACAATATCAACGGATATGGACAAAGCAAGATGAGATAGAATTATTGAAGGGATATCTGGATTACATCAAGCAACAAGGAAGAACAACCACCACTCTTCAAAGTGACGTAGCGTCTTTCTATGATCAAGTTACGCCCAAATTCAGAGCAGATTTCAATAAGAACCAGATTGTTGAGAAGCTACGTAGGTTAAAAAGAAAACACAAAATGGTTTTGGATAAAGCCAAAGAGGTTCAGGTTTCTTTCAAGAGCTCCCATGAACAAGCCGTTTTTGAAATTTCTCGCAAGATTTGGGGCAATGACACAGACCATGATGTTTTGGATGTTGATGAATCAAGACCGGTTCCTGACAGTCCTGATCTTATTGACAATATTAAGATGAAAGCCGAACATGTTGACAATTGTGAAGAAACAGATAAAAGGGTGCCAAAGCGTCCGAGGCTCGCAGCAGACAATGGTGATGCTACTAGTAGTATACATGGATTCATTGAGGAAACCATGAGGTCTTGTTTCTCACCGTTGCTGAAGGAACTATTGGATGATGCTCCGGTAGAGCCACTCGACGTGTTGCCAATGTTGTTATCCACCGAGGAAGAGAGGGACGAACAACGGTTAAAACGGAGGATTTTGGAGTTAGAGGTGTATCTGAATCGGTTGGAGTTGCTGCAGGGTCAGATCAAGGCTAGGTTGGAGGATTTGAGGTCTAGCTTAGGTTAA	1047	0.4298	MFSPLVSWILSTSSSSSSSSSSEEEHDPENLDTSNDESDYENFQTDNVEDQIDDVDDENIDDTIPIGLAISDASPAVTVALPAPTDYTNISTTSKESRSKRQHNKYSGGVRQYQRIWTKQDEIELLKGYLDYIKQQGRTTTTLQSDVASFYDQVTPKFRADFNKNQIVEKLRRLKRKHKMVLDKAKEVQVSFKSSHEQAVFEISRKIWGNDTDHDVLDVDESRPVPDSPDLIDNIKMKAEHVDNCEETDKRVPKRPRLAADNGDATSSIHGFIEETMRSCFSPLLKELLDDAPVEPLDVLPMLLSTEEERDEQRLKRRILELEVYLNRLELLQGQIKARLEDLRSSLG	348

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi241g00017	348	Coils	Coil	168	188	-	-
	Vivi241g00017	348	MobiDBLite	consensus disorder prediction	246	265	-	-
	Vivi241g00017	348	MobiDBLite	consensus disorder prediction	42	59	-	-
	Vivi241g00017	348	MobiDBLite	consensus disorder prediction	86	107	-	-
	Vivi241g00017	348	PANTHER	BNAANNG10740D PROTEIN-RELATED	14	340	IPR007592	GO:0006355
	Vivi241g00017	348	Coils	Coil	303	323	-	-
	Vivi241g00017	348	Pfam	Protein of unknown function, DUF573	114	209	IPR007592	GO:0006355
	Vivi241g00017	348	MobiDBLite	consensus disorder prediction	12	59	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi241g00017	69	345	GeBP Transcription Factor Family	AT5G28040	32.958	3.57e-42	150

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GeBP	Vivi241g00017		DUF573	7.1e-27	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi241g00017	-		-	vvo:131627402	654.055