Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi241g00016 ATGGCATTCTTCCAGAACCGCGTCGTTTTCCCGAAAGAGGAATATCCTGAGATCTTAGAGGAATACGAATTGGAAGAAGAGGAGGAAGAAGAAGACGACTACGTTTTAGAGCCACACGACTATCTCACCAACAACGAAACCGAACAATCTCATTCAACCTCCTCCGCCGCTCCCACCGTCATCCTCGCCTTACCGAACGCCGCAACGGCTGTTGCTGCTGAGTCGCCTGAGCCGAAACGGCAGCGAATTGACCAGGTGGAGGAGAAGAAGTCGTCCATGGAGGATTCGAGGAAATTGTTTCAGCGGCTTTGGACTGACGAGGATGAGATCGTGATCCTGCAAGGGTTTCTGGATTACAACGCGAATCGAGGATCGGCTTACCATAACGACTCGGCGTCGTTCTATGATCAGATTAAGTCGAAGCTTCAACTCGATTTCAACAAGAGCCAGCTTGTTGATAAATTGCGAAGGTTGAAGAAGAAGTATCGGAACCTTCTCCAGAAATTCGATTCTGGTAAGGAGTTTTTCTTCAAAACCCCGCATGAACAAGCTACGTTCGAAATTTCACACAAAATCTGGAACATTGTGACTCCAATTGGGATTCCTGTTGAAGATGACGGCGAAATTAACCCTAACCCTAACCGTAGTCCAAATTCAGGTCATACTACGCCGGTGAAGATTGAGCCACCGGTAATTGAGAAGAAAAGGAAGGGATCCCGAACGGCGGCAACAGAGGAGAAACTGCAGCAGCGGAAATTGAATGATAATTCAACAATGATGAATAAAGATAATCATAATAATTCTACTAACAACAATAGTAGCAATGCTGAAGATGAAAGTGGAGATAAGAGTAATGTATCTGGATTGATTGAAGAGACTGTGAAGAGTTGTTTGACTCCATTCTTGAAGGAGTTAACCGGTAGTAGCAACATGGGGAGTCCTTTTGGTTATGGAGGGAGAGGGTTTGGAGGTGGAGGTTTGTCATTGAATCCGATGCCATTTGGTTTTCTGAATATGGGGAATGGGGAAAAGGTGGGAGATGAAAAGTGGAAGAAGCAACAGATTTTGGAGCTGGAAGTGTATTCTAAGCGATTGGAGCTAGTGCAGGATGAGATCAAGGTTGCTTTGGAGGAATTGAGGTCAAATGCTGGAGCTGGAGGAAGCAGGAAATTTTAA 1176 0.4541 MAFFQNRVVFPKEEYPEILEEYELEEEEEEEDDYVLEPHDYLTNNETEQSHSTSSAAPTVILALPNAATAVAAESPEPKRQRIDQVEEKKSSMEDSRKLFQRLWTDEDEIVILQGFLDYNANRGSAYHNDSASFYDQIKSKLQLDFNKSQLVDKLRRLKKKYRNLLQKFDSGKEFFFKTPHEQATFEISHKIWNIVTPIGIPVEDDGEINPNPNRSPNSGHTTPVKIEPPVIEKKRKGSRTAATEEKLQQRKLNDNSTMMNKDNHNNSTNNNSSNAEDESGDKSNVSGLIEETVKSCLTPFLKELTGSSNMGSPFGYGGRGFGGGGLSLNPMPFGFLNMGNGEKVGDEKWKKQQILELEVYSKRLELVQDEIKVALEELRSNAGAGGSRKF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi241g00016 391 PANTHER BNAANNG10740D PROTEIN-RELATED 24 378 IPR007592 GO:0006355
Vivi241g00016 391 MobiDBLite consensus disorder prediction 204 284 - -
Vivi241g00016 391 MobiDBLite consensus disorder prediction 71 90 - -
Vivi241g00016 391 Pfam Protein of unknown function, DUF573 100 194 IPR007592 GO:0006355
Vivi241g00016 391 MobiDBLite consensus disorder prediction 228 252 - -
Vivi241g00016 391 MobiDBLite consensus disorder prediction 253 284 - -
Vivi241g00016 391 Coils Coil 148 168 - -
Vivi241g00016 391 Coils Coil 358 378 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi241g00016 49 386 GeBP Transcription Factor Family AT5G28040 44.142 1.12e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi241g00016 DUF573 1.9e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi241g00016 - - psat:127097903 585.874