Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi241g00001 ATGAGTGAAAGAGGGAAGAAAGAAAAACCAACAGAGAAAAAAGAGAGGATGAAGAACATCTTCAAAAAGCTTCATATAGGTAGCAGCCACGATCCTCATCGATCCAATGAAATTCCGCCACCTGTACCATCGCCGTCCGACGCCGCCGAGCATGTTCAGACTCCCGGCGGTTCTACAGTCACTCCTTCTACCTCGTCGCCGTCTACAGCGCCTATCACTCCTGCCTCCGCCGGCGGTGGTTTGTCTGCGGTAGTCAATCGTCAAGACTTTTTCTCATCTGAGGAGGAATTTCAGGTACAGTTAGCCCTAGCTATCAGTGCTTCTAATTCGGAGTTCCGTTGTGATGATCCGGAGAAGGATCAGATCCATGCGGCAACGCTACTCAGTTTGGGAGGACATCGTATTGATTCGAATAAGGATGATGTGGCGGAGGCGCTTTCCAGGCAGTATTGGGAATACAACGTGCTTGACTATGAAGAGAAAGTAATAGATGGTTTTTATGACGTATATGGCCTATATAATGACCCAGCAATGCAAGGAAAGATGCCATCTCTAGCTGATCTTGAAACAAACTCAGGTGGTTCTAGCTTTGAAGTGGTCATAGTTAATAGAACAATTGATCCTGCCCTGGACGAGCTGGTGCAAATTGCACATTGTATAGCATTGGACTGCCCTGTCACTGAGATTGGTATTTTGGTGCAAAGGCTTGCCGAGCTTGTTACTAGCCATATGGGCGGCCCTGTAAAAGATGCTAATATCATATTAACAAAATGGACAGAGAGAAGTACAGAGTTAAGGACATCTCTTCACACAAGTGTATTACCTCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGCGCTTTACTTTTCAAGATATTAGCAGACAACATCAAGATGCCTTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAATTAGATGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTCATCCCAGCTGATATTTTAAATGCGAAGGATAATGCCTTTAAGTCTTACAACCCCAAGATTGTGCCGAGTTTGCTTTCCGCTGAGGAAACTGATCTTTCTTACTCAAGACCTATACCACCCTCTAATGGTGAAGGCAGTAGTCAGACTTCTGTAATAAAAGGTCCTACGTTGCCTTGGAATGGACAATCATATACTGAGAAGTCAGAGTATATGCCTTCAAACTTTGGTTTGAACAGAGACACTGGTGTTGGTCCTTCTAAAATTCCTAATAGAGGGAGTCCTAATCAACGGGAAAATTTGCCACCTTCGTATGGTAATTCTTTGTACAAAGGTACTCTTGGAATGAATGCAGTGGGTGATGGGACAAGATTGAATGTCAATGTTGTGCCATATGCCCAAAACAACTCCACCGACCCTCAAAACCTTTTTGCAGACCTGAACCCATTTTTGATAAAAGGGACTGGGAAGTCATTTGTGCTCAACAAACCTGTGGAAAATAAACCTCCTGAGCACGGTACGAAAAACAATGCCGTTTCTGGTCGACCCGTGTCACCACTGATGTGGAAGAATCAGCATGCCTACAACGAAGTCCCCAGAAAAACTAATCATAACCCTAATGAATATAACCCTCCTTTATTAAATACTGATCTCAGCACTTCCAATTCATCATACAATTCAAATATAAATAATGATATTAGTTCTCAAACTTCTGCACAAATTACTGGTTCAGCCTCATCGGCTGGTGTAGGTGAGCCGAACTGGATCGAAGGTCTCAATACTAATTTTAGAAGGGGAGATTTGGAAAGTTCTCAAAGTCAAAATGTCATGGTAAAGGGATTTAACGAACCCGAAAGCACTGAACTCGGATACCGTGACAGGAGGAAGTGCATATATGACAGATTCATGGGAAGCAATTTGCAATTAAAAGATTCCGATAGTCCTAGCACTTCAATTGATTCCATTACAAACAGGGTCGATCAAATATTGGACGATGCAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATACCGTGCGGACTGGAATGGCACGGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGCCATCCAAATGTTGTTCTTTTTATGGGTGCTGTCACCCGGCCTCCCAATCTCTCAATCATTTCAGAGTTTCTCCCGAGAGGAAGCTTGTACCGAATTCTTCATCGCCCTAATTGTCAGATCGATGAGAAACAAAGAATAAAAATGGCTCTTGATGTGGCTAGGGGTATGAATTGCTTGCACGCTAGCACACCTACAATTGTTCACCGAGATCTGAAGTCCCCAAATCTTTTGGTTGATAAGAACTGGAACGTTAAGGTATGTGATTTTGGGCTGTCAAGGTTGAAGCATAACACATTTTTATCATCCAAATCAACTGCCGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCTTCCAATGAGAAGTGTGATGTTTATAGTTTCGGTGTCATCCTATGGGAGCTTGCCACTCTAAAGTTGCCTTGGACTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTAGGTTTCCAAAATCGCCGCCTTGAAATTCCTAAGGAAGTTGATCCTTTAGTAGCAAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCGTTTGCACAGCTGACTGTGGCTCTTAAGCCCTTGCAGCGTCTGGCTCTCCCATCTCACCAAGACCAGGTAGCTCCACCTCTGCCTCAGGAGATTTCTGTAAATTCTACCCCATGA 2898 0.4389 MSERGKKEKPTEKKERMKNIFKKLHIGSSHDPHRSNEIPPPVPSPSDAAEHVQTPGGSTVTPSTSSPSTAPITPASAGGGLSAVVNRQDFFSSEEEFQVQLALAISASNSEFRCDDPEKDQIHAATLLSLGGHRIDSNKDDVAEALSRQYWEYNVLDYEEKVIDGFYDVYGLYNDPAMQGKMPSLADLETNSGGSSFEVVIVNRTIDPALDELVQIAHCIALDCPVTEIGILVQRLAELVTSHMGGPVKDANIILTKWTERSTELRTSLHTSVLPLGSLDIGLSRHRALLFKILADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADILNAKDNAFKSYNPKIVPSLLSAEETDLSYSRPIPPSNGEGSSQTSVIKGPTLPWNGQSYTEKSEYMPSNFGLNRDTGVGPSKIPNRGSPNQRENLPPSYGNSLYKGTLGMNAVGDGTRLNVNVVPYAQNNSTDPQNLFADLNPFLIKGTGKSFVLNKPVENKPPEHGTKNNAVSGRPVSPLMWKNQHAYNEVPRKTNHNPNEYNPPLLNTDLSTSNSSYNSNINNDISSQTSAQITGSASSAGVGEPNWIEGLNTNFRRGDLESSQSQNVMVKGFNEPESTELGYRDRRKCIYDRFMGSNLQLKDSDSPSTSIDSITNRVDQILDDADVGECEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKQRIKMALDVARGMNCLHASTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWTGMNPMQVVGAVGFQNRRLEIPKEVDPLVARIIWECWQQDPNLRPSFAQLTVALKPLQRLALPSHQDQVAPPLPQEISVNSTP 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi241g00001 965 Pfam Ethylene-responsive protein kinase Le-CTR1 143 341 - -
Vivi241g00001 965 MobiDBLite consensus disorder prediction 1 78 - -
Vivi241g00001 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Vivi241g00001 965 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 212 941 - -
Vivi241g00001 965 SMART serkin_6 684 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi241g00001 965 ProSitePatterns Protein kinases ATP-binding region signature. 690 712 IPR017441 GO:0005524
Vivi241g00001 965 MobiDBLite consensus disorder prediction 428 442 - -
Vivi241g00001 965 Pfam Protein tyrosine and serine/threonine kinase 685 934 IPR001245 GO:0004672|GO:0006468
Vivi241g00001 965 Gene3D Transferase(Phosphotransferase) domain 1 763 946 - -
Vivi241g00001 965 MobiDBLite consensus disorder prediction 418 442 - -
Vivi241g00001 965 MobiDBLite consensus disorder prediction 375 405 - -
Vivi241g00001 965 ProSiteProfiles Protein kinase domain profile. 684 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi241g00001 965 PRINTS Tyrosine kinase catalytic domain signature 797 815 IPR001245 GO:0004672|GO:0006468
Vivi241g00001 965 PRINTS Tyrosine kinase catalytic domain signature 863 885 IPR001245 GO:0004672|GO:0006468
Vivi241g00001 965 PRINTS Tyrosine kinase catalytic domain signature 907 929 IPR001245 GO:0004672|GO:0006468
Vivi241g00001 965 PRINTS Tyrosine kinase catalytic domain signature 844 854 IPR001245 GO:0004672|GO:0006468
Vivi241g00001 965 PRINTS Tyrosine kinase catalytic domain signature 758 771 IPR001245 GO:0004672|GO:0006468
Vivi241g00001 965 MobiDBLite consensus disorder prediction 374 405 - -
Vivi241g00001 965 FunFam Serine/threonine-protein kinase isoform 1 675 762 - -
Vivi241g00001 965 Gene3D Phosphorylase Kinase; domain 1 677 761 - -
Vivi241g00001 965 SUPERFAMILY Protein kinase-like (PK-like) 675 956 IPR011009 -
Vivi241g00001 965 MobiDBLite consensus disorder prediction 51 75 - -
Vivi241g00001 965 CDD STKc_MAP3K-like 690 933 - -
Vivi241g00001 965 MobiDBLite consensus disorder prediction 504 525 - -
Vivi241g00001 965 MobiDBLite consensus disorder prediction 1 32 - -
Vivi241g00001 965 FunFam PAS domain-containing protein tyrosine kinase family protein 762 952 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi241g00001 17 920 MAP Kinase Kinase Kinase AT1G08720 55.400 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vivi241g00001 PK_Tyr_Ser-Thr 1.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi241g00001 - - aprc:113870732 1559.27