Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi240g00002 ATGAAAAACATCGACCATTATGATTCGTACGACTATCGATGCCGTGACAGTGGTACATCTGATTCTGAATCCGACAATGGTCGGGATGACAGTAATTCGGTGTCCAGTGCGTACCAAGGTTCAAGTGATGGTGATGGCGATGGCGATGGTGATAGTCACGATGAAAAATTTGTTGAATTTGATGCAGTTGTAGGTGATATAACAGTGAAAATTAATGCCCTTACTGCTGATGAAATTCGTGCTATGGAATTCGGTACAGTTGATGAAGCTAATGTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGACAAGATCGAATGAGGGTGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACACGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACACAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAGAAGGATAGTTATGTAGTGACATGTTTTGAAGAGGCTCACAACCATGAATTAACACCATCTAGGTTTGTCCACTTACACCCCATTTATCGTGAGATTACTGCAGCAGATAGAGCTCAGATTGACGGTCTACAGTCAAATGGAAGTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGACACGATCGTGTTGGGTTTACAAAGAAGGATCTGTACAATTATTTTGATAGTAAAATGCGTGCTAATATTAAAGATGGTGACGTTGCCGCTGCTATAAATTATCTAACTGTGAAGTCATCTACTGATCCCATGTTATATGGTAAATATGCCGTAGGCATGGATGGACGAATGAAGTCTCTTTTTTGGGCTGATGGAAGCAGTAGATCTGACTATTTTTGTTTTGGCGATGTGATTGTGTTCGACACGACTTACAAGAAGAACAAATACAACTACCCATTGGTTATATTTTCAGGGTGTAACCACCACTCTCAGACAGTTATTTTTGGTGTTGCGTTGGTGTCAGATGAAACGACAGAGACGTATAAGTGGTTGTTGGAGTGTTTTTTAGAGTGCATGGAAAATAAATACCCAGCAGCAGTTGTAACAGACGGAGATGGGGCGATGAGGGAATCTATAAAACAGGTGTTTCCGGATGCGACACATCGTTTATGCGCTTGGCATTTGAACAAGAATGCGTCTGAGAATGTAAAGAACTCGGAATTTTTGAAAGATTTTCAAAAAGCCATGTACTCTAATTTTACAAAGGATCAATTTGAAGAGTTTTGGTCAAAAACAATTAAAGAAAACGGACTTGAAGGAAATCCTTGGGTTGCAAAAACGTACGAGAACAGGTCACTATGGGAAACTGCATATCTACGTGAGAAGTTTTTTGGACGTATAAGAACTACGTCTCAATGTGAAGCCGTCAATGCATTCATCAAGAGTTATGTCAGGAAGAAAGGCTGCATTTTTGAATTTATGCACAATTTTGATCAGGCTATGAGATCTTATAGAAACAATGAACTGATTGCCGATTATAAATCAAAGTTTTCAGAACCTGTGATGACTACTCAACTGCGTGCCCTTGAGAGCCATGCTGCGAATGTTTATACTATGGAGATTTTCAAGGAAGTCAGAGATGAAATAGTGAAGGCTGGATCATTGATTGTTAAGGAAAAGTTAATTCGCAACGGATTTAAGACTTATCGATTTACAAAATATTGTTGTGATAACTATGACGTAGAGGTTGTGTATGATGGTGAAACACTTCAATGTGAGTGTAGGTTATGGGATTCTCATGGGATTCCATGTTCTCATATGTTTGGTGTCATGAAGGAAGAACATGTTAGTCTCATTCCCACCGGTTTGATTTTGTCGAGATGGACGAAGGATGCAAAAATTCAATACTTGAACATGAATTGTAATGGTTCTGATGATTCTAAAATGATTGAGCTAGCTCGGTTTGGTGCATATTGTTCTGCATTTACTGCCTTTTGCAATGAAGCTTCAAAAAGGGAAGGTGTTTATGGGGAAATAATGGGTGACATTCTGAAGTTACACAAAAAGTATTGCAGTACGGACGATCCTATTTTGGCATCGAACTCAGTTGTAGGTGATCCAAATATTGTGAATAGCAAAGGTGCTCCGAAGAAAAGAAAGAATGACATAAAATCTATTAGGCGATGTTCTAAATGCAACAGTAGAACTCATAATGCAAGGAGTTGTTCGAACAAGAATGGAAAAAGAGGTCGCATTGGTGGAAGTAGTGTGCAAAATAAATGTACAGAACCACCGAACTCTCGTGGCGCGAATGTGACAGCGACTTCTCGCGCGGAAGTTGGAAGCACAAGCATACCCATGCCTGCAATGATGGATGAACAATGGGCTGAGTATTTAGGTAATTACGTTTACGATGAGGTTGAACAGAATGTCGATCTCAGTGACATTGAAAGTGATGAAGGTGAAGAAGAGATGGATGAAAATTTCGGTGATCCCGTGGTCGAAGAAAATGGCATTTCATTCAATTATCGTGTCACTGCTGCTTGTGTAAGAGGAAAGAATGTTTTCATAAGTAATCTGGACCGGTTATTTTAA 2604 0.3963 MKNIDHYDSYDYRCRDSGTSDSESDNGRDDSNSVSSAYQGSSDGDGDGDGDSHDEKFVEFDAVVGDITVKINALTADEIRAMEFGTVDEANVFYFKYAKCKGFAIRKSDVRTRSNEGGQTIIMRQFVCNKHGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKDSYVVTCFEEAHNHELTPSRFVHLHPIYREITAADRAQIDGLQSNGSRTCHIMGYMVAQKGGHDRVGFTKKDLYNYFDSKMRANIKDGDVAAAINYLTVKSSTDPMLYGKYAVGMDGRMKSLFWADGSSRSDYFCFGDVIVFDTTYKKNKYNYPLVIFSGCNHHSQTVIFGVALVSDETTETYKWLLECFLECMENKYPAAVVTDGDGAMRESIKQVFPDATHRLCAWHLNKNASENVKNSEFLKDFQKAMYSNFTKDQFEEFWSKTIKENGLEGNPWVAKTYENRSLWETAYLREKFFGRIRTTSQCEAVNAFIKSYVRKKGCIFEFMHNFDQAMRSYRNNELIADYKSKFSEPVMTTQLRALESHAANVYTMEIFKEVRDEIVKAGSLIVKEKLIRNGFKTYRFTKYCCDNYDVEVVYDGETLQCECRLWDSHGIPCSHMFGVMKEEHVSLIPTGLILSRWTKDAKIQYLNMNCNGSDDSKMIELARFGAYCSAFTAFCNEASKREGVYGEIMGDILKLHKKYCSTDDPILASNSVVGDPNIVNSKGAPKKRKNDIKSIRRCSKCNSRTHNARSCSNKNGKRGRIGGSSVQNKCTEPPNSRGANVTATSRAEVGSTSIPMPAMMDEQWAEYLGNYVYDEVEQNVDLSDIESDEGEEEMDENFGDPVVEENGISFNYRVTAACVRGKNVFISNLDRLF 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi240g00002 867 Pfam FAR1 DNA-binding domain 93 185 IPR004330 -
Vivi240g00002 867 PANTHER OS01G0519700 PROTEIN 79 751 - -
Vivi240g00002 867 MobiDBLite consensus disorder prediction 738 781 - -
Vivi240g00002 867 MobiDBLite consensus disorder prediction 1 52 - -
Vivi240g00002 867 MobiDBLite consensus disorder prediction 1 28 - -
Vivi240g00002 867 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Vivi240g00002 867 Pfam MULE transposase domain 307 401 IPR018289 -
Vivi240g00002 867 SMART 26again6 593 620 IPR006564 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi240g00002 MULE 2.3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi240g00002 - - vvo:131620026 1518.83