Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi239g00028 ATGGATGGGAAGTCTAACCTTCCGATCAAGCCAGATTCTTCTTCCCCGAGCTTCGTCCGCAACTTTCAGGCCGCCCTGAAGCGCCACCGTCCTATCGGGCAATCCAATATCATTAGGCCAAGACGCACTATTCTTGTTAAACCACAGGATTCACTCACACAAAGAAACAACGATTCTGAAGCTAGCACTGTTGGTAACCCTTCTCAAGATGCAAATGTTCACAGCAAAGTTGCTCAAGGGGCCAATGATGAAAAGGCCAGTGAGTTGGAGAGTTTGTCTTCTTATATGAGTTCACTTGGATTCACAGATATGGAATATGTTGAAGGCAACCAACATGAAGGTTCAAGTGGATACACCAATGATGATTCTGAGCAACCTAAAATTCAGAAGGCTGAACCTGATGGAGGAGTAAGTTGCTCCATGTTGCCGAGGAGAGGTACGGTTACACGGGATAATTTGCATCAGTTCAGAAACTTTCTTAGTCAGCCAGCAACACAGTCTTCGGTGGTTGGACCTTCATGTGCCACAACTACCTCTGTCAATTCAACTTCAGCTCCTATGATGAATTCAACGACCCGTTTGCATTTGGAAAGTGGCCCTAACGTAGCGGCCGATCCTTTGGGAAAAGCTGAAAGAGTTATGGAACCAGCAAATATAGACACTAAAGCGAATAAATTATCAGTTGATAAGGCTGCAACTGTGGTGCAAACATTTGATTCTTGTGTCGACTCTGAGTTAGCAATTAGAGGGAGTGACCAATCTAAGGAACAACCAGATTGCATGTTAAAAGAAACTCACAATTCAAAATATGCTTCTTCTGATGGTGACAAATTGATCAAAGGGAAAGAGCCTGCAGATGTTATCAGCGTACAGTCTCAGGCACTGGTGCCTAAAACATCGTCTTTGGACGTGAAGTCTGAATATTCTAAGTTAGAAAAACGAGAGAAGGCTGCAAGTAGTAAAGGTTCCTCAGTCGCTAAGAAAAGGACTTATGACCCAGATTTATTTTTCAAGGTCAATGGCAAGCTTTATCAGCGTCTTGGCAAGATAGGAAGTGGAGGAAGTAGTGAGGTTCACAAGGTTATTTCATCAGATTGTAATATATTTGCACTTAAGAAGATCAAACTCAGGGGTCGTGATTATGCTACTGCATATGGATTTTGTCAAGAGATTGAGTATCTTAATAGGCTGAAAGGAAAGGACAATATTATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTCGAAGAAGTTATGAAAGGCTCTCTTTGTATTAAGGATGGTCGGGTCAAAGATGATGGATATATATACATGGTTCTTGAATACGGTGAAATTGATTTAGCTCACATGTTGTCACAGCAGTGGAAGAAGCTGGGTGAATCAAACGAGATCATAGATGAAAATTGGCTCCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATTCACGAGGAACGTATTGTGCACTCTGACTTGAAGCCTGCTAACTTCCTCCTCGTCAAAGGTTCCCTAAAATTAATTGATTTCGGTATCGCCAAAGCAATAATGAGCGATACTACTAATATCCAACGGGAATCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAAGCATTTATGTGTAATGAGACTGATGCGAACGGAAACATCATCAAGTGTGGTCGGCCATCAGATATCTGGTCTTTGGGGTGCATCCTCTACCAAATGGTATATGGGAGAACCCCTTTTTCAGAATACAAGACATTTTGGGCCAAATTTAAAGTTATTACAGATCCCAAACATGAAATCACCTATGAACCACTTTCAAATCCATGGTTAGTGGATCTCATGAAGAGGTGTTTAGCATGGGATCGCAACCAAAGGTGGAGAATTCCTCAGTTACTCCAACATCCTTTTCTTGCACCTCATGTACTACCTCATCCATCTTTGTCCCAAGACCATAGCTGTAAATTTGTACAACTTGTTGCTGAACCTTGTGCATATGACCCTGAAGCATCCCAACTTTGTCATCAACTCCAACGTATACTGGTTGATCCACTTGAGTCAGTGAATCACTCACTAAACTCAAGAGAACAACAAAGAACACTGTTGTCCAAACTGTCTGAACTCTGTATTCAGCTGCGGGAGCGTTTGATGGGTACTGATATTCCGTAG 2166 0.4211 MDGKSNLPIKPDSSSPSFVRNFQAALKRHRPIGQSNIIRPRRTILVKPQDSLTQRNNDSEASTVGNPSQDANVHSKVAQGANDEKASELESLSSYMSSLGFTDMEYVEGNQHEGSSGYTNDDSEQPKIQKAEPDGGVSCSMLPRRGTVTRDNLHQFRNFLSQPATQSSVVGPSCATTTSVNSTSAPMMNSTTRLHLESGPNVAADPLGKAERVMEPANIDTKANKLSVDKAATVVQTFDSCVDSELAIRGSDQSKEQPDCMLKETHNSKYASSDGDKLIKGKEPADVISVQSQALVPKTSSLDVKSEYSKLEKREKAASSKGSSVAKKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCNIFALKKIKLRGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSLCIKDGRVKDDGYIYMVLEYGEIDLAHMLSQQWKKLGESNEIIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPKHEITYEPLSNPWLVDLMKRCLAWDRNQRWRIPQLLQHPFLAPHVLPHPSLSQDHSCKFVQLVAEPCAYDPEASQLCHQLQRILVDPLESVNHSLNSREQQRTLLSKLSELCIQLRERLMGTDIP 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi239g00028 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Vivi239g00028 721 MobiDBLite consensus disorder prediction 29 89 - -
Vivi239g00028 721 SMART serkin_6 344 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00028 721 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Vivi239g00028 721 FunFam serine/threonine-protein kinase mph1 isoform X2 337 424 - -
Vivi239g00028 721 MobiDBLite consensus disorder prediction 109 144 - -
Vivi239g00028 721 SUPERFAMILY Protein kinase-like (PK-like) 338 649 IPR011009 -
Vivi239g00028 721 MobiDBLite consensus disorder prediction 47 76 - -
Vivi239g00028 721 ProSiteProfiles Protein kinase domain profile. 344 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00028 721 Gene3D Phosphorylase Kinase; domain 1 337 424 - -
Vivi239g00028 721 PANTHER MIXED LINEAGE PROTEIN KINASE 38 668 - -
Vivi239g00028 721 Gene3D Transferase(Phosphotransferase) domain 1 457 642 - -
Vivi239g00028 721 CDD PKc_Mps1 342 637 IPR027084 -
Vivi239g00028 721 FunFam serine/threonine-protein kinase mph1 isoform X1 458 640 - -
Vivi239g00028 721 Pfam Protein kinase domain 344 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00028 721 MobiDBLite consensus disorder prediction 167 186 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi239g00028 350 637 MAP Kinase Kinase Kinase AT4G08470 28.328 7.41e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Vivi239g00028 Pkinase 6.4e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi239g00028 K08866 - gmx:100788990 947.577