Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi239g00026 ATGGATGGGAAGTCTAACCTTCCGATCAAGCCAGATTCTTCTTCCCCGAGCTTCGTCCGCAACTTTCAGGCCGCCCTGAAGCGCCACCGTCCTATCGCTACAGGGCAATCCAATATCATTAGGCCAAGACGCACTATTCTTGTTAAACCACAGGATTCACTCACACAAAGAAACAACGATTCTGAAGCTAGCACTGTTGGTAACCCTTCTCAAGATGCAAATGTTCACAGCAAAGTTGCTCAAGATATGGAATATGTTGAAGGCAACCAACATGAAGGTTCAAGTGGATACACCAATGATGATTCTGAGCAACCTAAAATTCAGAAGGCTGAACCTGATGGAGGAGTAAGTTGCTCCATGTTGCCGAGGAGAGGTACGGTTACACGGGATAATTTGCATCAGTTCAGAAACTTTCTTAGTCAGCCAGCAACACAGTCTTCGGTGGTTGGACCTTCATGTGCCACAACTACCTCTGTCAATTCAACTTCAGCTCCTATGATGAATTCAACGACCCGTTTGCATTTGGAAAGTGGCCCTAACGTAGCGGCCGATCCTTTGGGAAAAGCTGAAAGAGTTATGGAACCAGCAAATATAGACACTAAAGCGAATAAATTATCAGTTGATAAGGCTGCAACTGTGGTGCAAACATTTGATTCTTGTGTCGACTCTGAGTTAGCAATTAGAGGGAGTGACCAATCTAAGGAACAACCAGATTGCATGTTAAAAGAAACTCACAATTCAAAATATGCTTCTTCTGATGGTGACAAATTGATCAAAGGGAAAGAGCCTGCAGATGTTATCAGCGTACAGTCTCAGGCACTGGTGCCTAAAACATCGTCTTTGGACGTGAAGTCTGAATATTCTAAGTTAGAAAAACGAGAGAAGGCTGCAAGTAGTAAAGGTTCCTCAGTCGCTAAGAAAAGGACTTATGACCCAGATTTATTTTTCAAGGTCAATGGCAAGCTTTATCAGCGTCTTGGCAAGATAGGAAGTGGAGGAAGTAGTGAGGTTCACAAGGTTATTTCATCAGATTGTAATATATTTGCACTTAAGAAGATCAAACTCAGGGGTCGTGATTATGCTACTGCATATGGATTTTGTCAAGAGATTGAGTATCTTAATAGGCTGAAAGGAAAGGACAATATTATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTCGAAGAAGTTATGAAAGGCTCTCTTTGTATTAAGGATGGTCGGGTCAAAGATGATGGATATATATACATGGTTCTTGAATACGGTGAAATTGATTTAGCTCACATGTTGTCACAGCAGTGGAAGAAGCTGGGTGAATCAAACGAGATCATAGATGAAAATTGGCTCCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAATACAATTCACGAGGAACGTATTGTGCACTCTGACTTGAAGCCTGCTAACTTCCTCCTCGTCAAAGGTTCCCTAAAATTAATTGATTTCGGTATCGCCAAAGCAATAATGAGCGATACTACTAATATCCAACGGGAATCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAAGCATTTATGTGTAATGAGACTGATGCGAACGGAAACATCATCAAGTGTGGTCGGCCATCAGATATCTGGTCTTTGGGGTGCATCCTCTACCAAATGGTATATGGGAGAACCCCTTTTTCAGAATACAAGACATTTTGGGCCAAATTTAAAGTTATTACAGATCCCAAACATGAAATCACCTATGAACCACTTTCAAATCCATGGTTAGTGGATCTCATGAAGAGGTGTTTAGCATGGGATCGCAACCAAAGGTGGAGAATTCCTCAGTTACTCCAACATCCTTTTCTTGCACCTCATGTACTACCTCATCCATCTTTGTCCCAAGACCATAGCTGTAAATTTGTACAACTTGTTGCTGAACCTTGTGCATATGACCCTGAAGCATCCCAACTTTGTCATCAACTCCAACGTATACTGGTTGATCCACTTGAGTCAGTGAATCACTCACTAAACTCAAGAGAACAACAAAGAACACTGTTGTCCAAACTGTCTGAACTCTGTATTCAGCTGCGGGAGCGTTTGATGGGTACTGATATTCCGTAG 2103 0.4208 MDGKSNLPIKPDSSSPSFVRNFQAALKRHRPIATGQSNIIRPRRTILVKPQDSLTQRNNDSEASTVGNPSQDANVHSKVAQDMEYVEGNQHEGSSGYTNDDSEQPKIQKAEPDGGVSCSMLPRRGTVTRDNLHQFRNFLSQPATQSSVVGPSCATTTSVNSTSAPMMNSTTRLHLESGPNVAADPLGKAERVMEPANIDTKANKLSVDKAATVVQTFDSCVDSELAIRGSDQSKEQPDCMLKETHNSKYASSDGDKLIKGKEPADVISVQSQALVPKTSSLDVKSEYSKLEKREKAASSKGSSVAKKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCNIFALKKIKLRGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSLCIKDGRVKDDGYIYMVLEYGEIDLAHMLSQQWKKLGESNEIIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRESQVGTLSYMSPEAFMCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPKHEITYEPLSNPWLVDLMKRCLAWDRNQRWRIPQLLQHPFLAPHVLPHPSLSQDHSCKFVQLVAEPCAYDPEASQLCHQLQRILVDPLESVNHSLNSREQQRTLLSKLSELCIQLRERLMGTDIP 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi239g00026 700 ProSiteProfiles Protein kinase domain profile. 323 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00026 700 Gene3D Phosphorylase Kinase; domain 1 316 403 - -
Vivi239g00026 700 PANTHER MIXED LINEAGE PROTEIN KINASE 40 647 - -
Vivi239g00026 700 FunFam serine/threonine-protein kinase mph1 isoform X2 316 403 - -
Vivi239g00026 700 FunFam serine/threonine-protein kinase mph1 isoform X1 437 619 - -
Vivi239g00026 700 SMART serkin_6 323 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00026 700 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Vivi239g00026 700 MobiDBLite consensus disorder prediction 145 165 - -
Vivi239g00026 700 Pfam Protein kinase domain 323 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00026 700 Gene3D Transferase(Phosphotransferase) domain 1 436 621 - -
Vivi239g00026 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Vivi239g00026 700 MobiDBLite consensus disorder prediction 29 73 - -
Vivi239g00026 700 CDD PKc_Mps1 321 616 IPR027084 -
Vivi239g00026 700 SUPERFAMILY Protein kinase-like (PK-like) 317 628 IPR011009 -
Vivi239g00026 700 MobiDBLite consensus disorder prediction 89 119 - -
Vivi239g00026 700 MobiDBLite consensus disorder prediction 49 73 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi239g00026 329 616 MAP Kinase Kinase Kinase AT4G08470 28.328 5.73e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Vivi239g00026 Pkinase 6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi239g00026 K08866 - gmx:100788990 922.539