Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi239g00022 ATGCAAGGAGCTGGAAATATGCAAGGAGCTGGAAATACGCAAGGAGTTCGAGATATGCAAGGAGTTGAAAATACGCAAAATAACGTTATGGAGCAAGACACTATAACAGCAACAACACCCATTGAGCCAGCCGCGGATCTTCCTCCTATTGGCCGGAAGAAAAGAAGAGCTAATGCAAATGCTATTAGAAAGAGGTCTGAGGTATGGGACCACTTTAACCTTATTCCTAATAGTGATCCCGCTACTGCGGCATGTAAGTATTGTCATCAGAAGTACATGTGTGACTCTAAGAAACATGGAACGTCAAACTTAAAGAGTCATATGAAAACATGTCCTAAGTATCCGCTGAACTTGTCAACCGACTCTACCCAAACTGTATTGACATATTCAACAACTCAAGGAGGTGTTTTGGTCCAAACATCCTCCCGGTTTGATCCTTTAGGTTGTAGAAAGGGGCTGGCTTACTTTATCATTTTAGATGAGAAGCCATTTATTACCGTTGAAGGAGAGGGATTCAAGTACTTTTGTAACCAAATGCAGCCCCAATTTACTATACCATCTAGGAGAACCATTGCTAGGGATTGTTTTCAGATATATCTTGATGAGAAAGTGAGGTTGAGAGCGTTATTTAAGTCTGATTGTAGTAGGGTGGCAATTACAACAGATTGTTGGACTTCGGTTCAAAATCTTAACTACTTAACCCTCACTGCCCATTTTATAGATAGAGATTGGAAATACCAAAAAAGGATCATTAGTTTTACGGTTATCCCTAATCACCGAGGTAAAACAGTTGGTAAGAAGGTTGAGGATGTGTTGAAGGAGTGGGGGCTGAGAAACGTTTCAACTATCACGGTGGATAACGCGGCATCAAATGATATAAGCTTTGATCTTTGTTCTAATATTTTTTTTGAAAATGTTGAAATGACAGTGCCTCTATTGTTGAGATATGGAAAGTGCTTCTTTTTATCCTTTCAGTACTTCTTTTTGAGGACACTATTGCGGATAGCTTTCCCTTTGCAGGTAAAGGATTATTTGCTTAAGCACAGAAGCACGTTGAAATCTGATGCTGATGCGGTTACGGTGCTGGATGGAACACAGAAAGGTGCTTTTCAATGGGAATTGAAGGAAATGGGAGAAAAGGATTATGAAGCTTATAAAAGATAG 1164 0.3986 MQGAGNMQGAGNTQGVRDMQGVENTQNNVMEQDTITATTPIEPAADLPPIGRKKRRANANAIRKRSEVWDHFNLIPNSDPATAACKYCHQKYMCDSKKHGTSNLKSHMKTCPKYPLNLSTDSTQTVLTYSTTQGGVLVQTSSRFDPLGCRKGLAYFIILDEKPFITVEGEGFKYFCNQMQPQFTIPSRRTIARDCFQIYLDEKVRLRALFKSDCSRVAITTDCWTSVQNLNYLTLTAHFIDRDWKYQKRIISFTVIPNHRGKTVGKKVEDVLKEWGLRNVSTITVDNAASNDISFDLCSNIFFENVEMTVPLLLRYGKCFFLSFQYFFLRTLLRIAFPLQVKDYLLKHRSTLKSDADAVTVLDGTQKGAFQWELKEMGEKDYEAYKR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi239g00022 387 Pfam BED zinc finger 66 111 IPR003656 GO:0003677
Vivi239g00022 387 SMART bed5 63 114 - -
Vivi239g00022 387 ProSiteProfiles Zinc finger BED-type profile. 63 118 IPR003656 GO:0003677
Vivi239g00022 387 SUPERFAMILY Hermes dimerisation domain 153 200 - -
Vivi239g00022 387 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 55 294 - -
Vivi239g00022 387 SUPERFAMILY Ribonuclease H-like 208 298 IPR012337 -
Vivi239g00022 387 SUPERFAMILY beta-beta-alpha zinc fingers 66 113 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi239g00022 339 372 Calmodulin-binding Proteins AT3G04080 64.706 1.25e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi239g00022 - - vvo:131627360 780.4