Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi239g00016 ATGTCTACTGCCCTTGAATACAGCGTCGTTGAACTTGAACCCTTTAAGTCAATTACACCATTGCTATCAAACTCCTCAAACAAAGAGGAAGATGATAACTATTTAACTATGGTGAAAAACATAATCATAAAGGGAAGATCCGAAGTAGAACCCTCAGTGTTAGACCCTCGTGATGAAGGAACCTCAGATCACTGGATTCAAAGAAACACTTCCTTGATCCGTCTCACTGGCAAACACCCTTTCAACTCAGAGCCACCACTCCAAACCCTCATGCACCACGGCTTCATAACTCCCGTTCCGCTCCACTATGTTCGCAACCACGGGCCCGTTCCCAAAGCCCGCTGGGCCGAATGGACCGTCGAAGTAACAGGCCTTGTTAAAAACCCTACCAGTTTCACAATGGACCAACTGGTCAACGACTTCCCAAGCCGGGAGTTTCCGGTGACACTCGTTTGCTCGGCAAACCGCCGCAAGGAACAAAACATGGTCAAACAAACTATTGGCTTTAACTGGGGGCCATCCGCTACCTCCACATCGGTGTGGCGCGGTGTACCGCTGAGAAGCATCCTCAAGCGTTGTGGTGTCTATAACCGCAACAGTGGGGCTCTCTATGTTTGCTTTGAAGGTGATGAGGAACTTCCAGGTGGTGGTGGGTGTAAATATGGAACTAGTCTCTTGTACGAGGTTGCACTGGATCGTACTCGCGATATTATTATTGCGTATATGCAAAACGGTGACGTTTTATCTCCTGATCATGGGTTTCCTGTTAGGGTTATTGTGCCTGGTTTCACTGCTGGGAGAATGGTGAAATGGTTGAAGCGAATTGTTGTAACAACCACGGAATCTGATAGCTATTATCATTATCATGATAACAGATTACTTCCCACTCATGTTGATGCTGAGCTTGCCAATACAGAAGCTTGGTTCTATAAACCGGAGTATATTATCAACGAGTTGAACATAAACTCCGTGATAACAACTCCGTGTCACGGTGAGATATTGGCAGTGAACTCAGACACTACTCACATGCCTTATTTACTTAGAGGCTATGCATATTCCGGTGGTGGGAGAAAGGTGACACGAGTTGAAGTAACGATGGACGGTGGTGAAACATGGAGAGTATGCTTATTGGAGCATCCGGAGAAACCAAACAAATATGGTAAGTATTGGTGTTGGTGTTTTTGGTCGTTGGAAGTTGAAGTGTTGGACTTGTTTGGAGGCAAAGAGATTGCTGTGCGTGCATGGGACTTGGCTAACAACACCCAGCCTGAGAATCTTAATTGGAATCTTATGGGCATGATGAACAACTGCTGGTTCAGAGTCAAAACAAACAAGTACAAGCCTAATAAGGGAGAAATTGGAATAGTGTTTGAGCACCCAACCCAACCAGGAAACCAATCTGGTGGTTGGATGGTCAAAGAAAAAGAGAAAGCATCTCCCAAATCATCAAACTCTGACCCAACCAAGAAGATCAATATTTCCTCATCACTGCAATCAAACAGTGCTAGTACTACTATCTCAAAAATATTCACTATCTCTGAGGTGAAAAAACATAATAACTCTGATTCAGCTTGGATAATCATAGATGGTCACGTTTATGATTGCACTCACTACCTCAAAGACCACCCTGGAGGTGCCGATAGCATCCTCATCAACGCCGGCACTGATTGTACAGAGGAGTTTGAAGCCATCCACTCTGATAAAGCAAAGAAAATGCTTGATGATTACTTAATCGGCGAGCTCGTAACCACCGACGCCGATGGAAATAACACTGAAGCCACCGGTAAAGCTATTATTAAACAAATGCATAACAAGGTGGCTTTAATAAACCCACGTGAGAAAATTCCATGCAAGCTTGTGTCAAAAACATCAATCTCCCATAATGTTAGGATCTTCCGTTTTGCTTTACCTTATGAGGACCAACCATTGGGTTTACCAGTTGGGAAGCACTTGTTTTTATGTGATACTATTGAAGATAAGCTATGCATGCGAGCTTTCACTCCTACAAGCAGTGTAGATGAAAAGGGATACTTTGATCTATTGGTTAAGATTTATTTCAAAGGAGTCCATCCAAAGTTTCCAAAAGGTGGCACTATGTCTCAACATTTGGATTCTTTGCCTATTGGTTCAGTTTTAGATATAAAGGGTCCATTGGGACATATTGAGTATACTGGTAAAGGAAATTTTCTAGTTCGTGGGGAACATAAGTTTGCAAAGAAGTTAGCAATGTTGGCTGGTGGAACTGGGATAACACCGATATACCAAGTGGTTCAAGCGATTCTAAAAGATCCAGAAGATCTCACTGAAATGCATGTTGTGTATGGTAATCAAAGTGAGGATGATATATTGCTGAGAGAAGAGTTGGATGCTTGGGCTGAGAAATATGAACGGTTCAATGTGTGGTACGTGGTGCAAGAAAGTAAAAGAGAAGATTGGGAGTATAGTGTGGGGTTCATCACAGAAAGTATATTGAAGAAGCATGTTCCAGAAGCAGAAGATGGTACAGTGGCATTGGCATGTGGACCACCAGCTATGATTCATGGAGTGCAATCACATTTGGAGAAATTGGGATATGATATCAAGAACAACTTGCTGGTGTTTTAG 2604 0.4316 MSTALEYSVVELEPFKSITPLLSNSSNKEEDDNYLTMVKNIIIKGRSEVEPSVLDPRDEGTSDHWIQRNTSLIRLTGKHPFNSEPPLQTLMHHGFITPVPLHYVRNHGPVPKARWAEWTVEVTGLVKNPTSFTMDQLVNDFPSREFPVTLVCSANRRKEQNMVKQTIGFNWGPSATSTSVWRGVPLRSILKRCGVYNRNSGALYVCFEGDEELPGGGGCKYGTSLLYEVALDRTRDIIIAYMQNGDVLSPDHGFPVRVIVPGFTAGRMVKWLKRIVVTTTESDSYYHYHDNRLLPTHVDAELANTEAWFYKPEYIINELNINSVITTPCHGEILAVNSDTTHMPYLLRGYAYSGGGRKVTRVEVTMDGGETWRVCLLEHPEKPNKYGKYWCWCFWSLEVEVLDLFGGKEIAVRAWDLANNTQPENLNWNLMGMMNNCWFRVKTNKYKPNKGEIGIVFEHPTQPGNQSGGWMVKEKEKASPKSSNSDPTKKINISSSLQSNSASTTISKIFTISEVKKHNNSDSAWIIIDGHVYDCTHYLKDHPGGADSILINAGTDCTEEFEAIHSDKAKKMLDDYLIGELVTTDADGNNTEATGKAIIKQMHNKVALINPREKIPCKLVSKTSISHNVRIFRFALPYEDQPLGLPVGKHLFLCDTIEDKLCMRAFTPTSSVDEKGYFDLLVKIYFKGVHPKFPKGGTMSQHLDSLPIGSVLDIKGPLGHIEYTGKGNFLVRGEHKFAKKLAMLAGGTGITPIYQVVQAILKDPEDLTEMHVVYGNQSEDDILLREELDAWAEKYERFNVWYVVQESKREDWEYSVGFITESILKKHVPEAEDGTVALACGPPAMIHGVQSHLEKLGYDIKNNLLVF 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi239g00016 867 CDD eukary_NR_Moco 58 443 - -
Vivi239g00016 867 FunFam Nitrate reductase 59 308 - -
Vivi239g00016 867 FunFam NADH-cytochrome b5 reductase 602 718 - -
Vivi239g00016 867 Gene3D Translation factors 604 718 - -
Vivi239g00016 867 SUPERFAMILY E set domains 318 442 IPR014756 -
Vivi239g00016 867 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 711 862 IPR039261 -
Vivi239g00016 867 SUPERFAMILY Riboflavin synthase domain-like 606 725 IPR017938 -
Vivi239g00016 867 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 55 316 IPR036374 -
Vivi239g00016 867 PRINTS Cytochrome B5 reductase signature 836 844 - -
Vivi239g00016 867 PRINTS Cytochrome B5 reductase signature 643 654 - -
Vivi239g00016 867 PRINTS Cytochrome B5 reductase signature 709 723 - -
Vivi239g00016 867 PRINTS Cytochrome B5 reductase signature 780 791 - -
Vivi239g00016 867 PRINTS Cytochrome B5 reductase signature 742 761 - -
Vivi239g00016 867 PRINTS Cytochrome B5 reductase signature 664 671 - -
Vivi239g00016 867 FunFam Sulfite oxidase, mitochondrial 505 586 - -
Vivi239g00016 867 FunFam Nitrate reductase [NADH] 719 867 - -
Vivi239g00016 867 Pfam Oxidoreductase NAD-binding domain 743 850 IPR001433 GO:0016491
Vivi239g00016 867 Pfam Cytochrome b5-like Heme/Steroid binding domain 512 581 IPR001199 -
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 148 159 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 174 189 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 249 262 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 347 361 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 73 87 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 232 248 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 426 439 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 159 171 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 316 328 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 413 425 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 265 278 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 361 373 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 95 111 IPR008335 GO:0016491
Vivi239g00016 867 PRINTS Eukaryotic molybdopterin domain signature 388 398 IPR008335 GO:0016491
Vivi239g00016 867 Gene3D - 506 593 IPR036400 -
Vivi239g00016 867 Gene3D - 318 493 - -
Vivi239g00016 867 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 505 584 IPR036400 -
Vivi239g00016 867 PRINTS Cytochrome B5 signature 557 564 IPR001199 -
Vivi239g00016 867 PRINTS Cytochrome B5 signature 542 556 IPR001199 -
Vivi239g00016 867 PRINTS Cytochrome B5 signature 569 581 IPR001199 -
Vivi239g00016 867 PRINTS Cytochrome B5 signature 532 542 IPR001199 -
Vivi239g00016 867 Pfam Oxidoreductase FAD-binding domain 617 723 IPR008333 -
Vivi239g00016 867 CDD cyt_b5_reduct_like 617 867 - -
Vivi239g00016 867 Gene3D - 57 308 IPR036374 -
Vivi239g00016 867 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 780 791 IPR001709 GO:0016491
Vivi239g00016 867 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 664 671 IPR001709 GO:0016491
Vivi239g00016 867 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 812 828 IPR001709 GO:0016491
Vivi239g00016 867 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 836 844 IPR001709 GO:0016491
Vivi239g00016 867 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 768 777 IPR001709 GO:0016491
Vivi239g00016 867 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 742 761 IPR001709 GO:0016491
Vivi239g00016 867 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 541 551 IPR001709 GO:0016491
Vivi239g00016 867 Pfam Mo-co oxidoreductase dimerisation domain 314 445 IPR005066 GO:0016491|GO:0030151
Vivi239g00016 867 PIRSF Nitr_rd_NADH 3 866 IPR012137 GO:0006809|GO:0042128|GO:0050464
Vivi239g00016 867 Gene3D - 719 867 IPR039261 -
Vivi239g00016 867 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 124 159 IPR022407 GO:0043546
Vivi239g00016 867 Pfam Oxidoreductase molybdopterin binding domain 107 286 IPR000572 -
Vivi239g00016 867 FunFam Nitrate reductase 318 495 - -
Vivi239g00016 867 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 507 582 IPR001199 -
Vivi239g00016 867 MobiDBLite consensus disorder prediction 465 496 - -
Vivi239g00016 867 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 538 545 IPR018506 GO:0020037
Vivi239g00016 867 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 612 724 IPR017927 GO:0016491
Vivi239g00016 867 SMART Cyt_b5_2 510 582 IPR001199 -
Vivi239g00016 867 PANTHER SULFITE REDUCTASE 33 449 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi239g00016 609 858 NADPH P450 reductases AT5G17770 36.364 1.35e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi239g00016 K10534 - gmx:732634 1334.32