Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi239g00010 ATGCATCAGATTTTCCATAACAACCTAACCAACGCCATGGACTCCAAGAAGCTTCGAAGAAAACCTAAGCTCGACCGTCGTAATGCTCTCAAGTACTTCGATTACGACGCTGGATCGTCTTCTTCTTCGTCCGATGATTCTTCTGGTTCGCTCTATACACGTTCTATGGAGTTGTATGATCGTACTAGCTTCCGAATTGAAGGGGCTGAAGGTGAGCTTGATCGGATTTGTAAGAGTTTGGGACTTTCTGGACCGGAGGATTTTGCTATTCCGGCGGCTGCTTGGGAGGCTATGAAGGTTCGGTACTCTACGGATAGTCTATCGAGTTTGAAGCTTGAAGAGGTCGATTTTCAGGAGAAGGTGAATGAGGTGAGAGAATCAGAAGAGGAAGGTGGATTGAATAAGAAATGTGAACACAGTGTTAGGGATAGTGATAGGGTTACAGATGAGGTTGTTGAGACTGTTCTTGTTGCTGCTAGTGATGGTGATGGTCGTGGGGGTATCAGTGGAATTCATCCGGCAATGATTAAGGTGCCGGAATTGGCTCCGATAAGGGAAGGGGAAGAAGGGATTTTGAACGGGGAAGTGGTGGAGAAAGAAGGTGAGGAAGTTGGTATTGGTACAGGTATAGGTAGGGTAAGTTTGAAGAGGGAAGAGGAAGAGGGGGTGGTGGATAATACGGATAGGATTGCTGAGATTGTTGTTGGCCTTTCGGAATCATCTTTGTTTAGTACTACTTCCAACGAAGATGGTTCATCTAGGACTGCCATGGAACCTTGCTCCAATCATGTGTCTCCTAACGGGAGAATTAAGCGTATTATTACCCCTGGATGCTGGCAAAAGGGTCAGTTTTTGGGTGGAGGTTCGTTTGGATCTGTCTATGAAGGAATTTCTGACGATGGATTCTTTTTTGCTGTTAAAGAAGTTTCATTGCTTGATCAAGGAGATCAGGGAAAACAAAGTGTCTATCAGCTGGAGCAGGAAATTGCACTTTTGAGTCGTTTTGAACATGATAATATAGTTCAATACTATGGCACTGAAATGGATAAATCCAAGCTGCATATCTTTATTGAGCTTGTAACCAAGGGTTCTCTTAGAAGCCTCTATCAGAGGTATACTCTCCGAGATTCCCTAGTATCTGCCTATACAAGACAGATTCTGCATGGTTTGAAGTATCTTCACGATCAAAATGTGGTTCACAGGGATATCAAATGTGCAAATATATTGGTGCATGCAAGTGGATCTGTCAAACTTGCAGATTTTGGGTTAGCAAAGGCAACCAAATTGAATGATGTTAAATCATGCAAAGGGACAGCATTCTGGATGGCCCCTGAGGTTGTGAAAGGAAAGAACAAAGGTTATGGGCTACCAGCTGATGTTTGGAGTCTGGGATGCACTGTGCTGGAGATGCTAACGGGACAAATTCCTTACTCCAATTTGGAATGTATGCAGGCAATATTTAAAATTGGAAAAGGTGTGCTACCTCCTATTCCTGATACTCTTTCAAGAGATGCAAAAGATTTTATCATGCAGTGCCTTCAAGTTAATCCTGATGATCGTCCTACTGCTGCTCAACTCTTAAACCATCCGTTTCTCCATAGGCCACTTTCACAGTCTTCATCTCCTTACATTCATGGCAGAAGGGGTTAA 1650 0.4352 MHQIFHNNLTNAMDSKKLRRKPKLDRRNALKYFDYDAGSSSSSSDDSSGSLYTRSMELYDRTSFRIEGAEGELDRICKSLGLSGPEDFAIPAAAWEAMKVRYSTDSLSSLKLEEVDFQEKVNEVRESEEEGGLNKKCEHSVRDSDRVTDEVVETVLVAASDGDGRGGISGIHPAMIKVPELAPIREGEEGILNGEVVEKEGEEVGIGTGIGRVSLKREEEEGVVDNTDRIAEIVVGLSESSLFSTTSNEDGSSRTAMEPCSNHVSPNGRIKRIITPGCWQKGQFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGDQGKQSVYQLEQEIALLSRFEHDNIVQYYGTEMDKSKLHIFIELVTKGSLRSLYQRYTLRDSLVSAYTRQILHGLKYLHDQNVVHRDIKCANILVHASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNKGYGLPADVWSLGCTVLEMLTGQIPYSNLECMQAIFKIGKGVLPPIPDTLSRDAKDFIMQCLQVNPDDRPTAAQLLNHPFLHRPLSQSSSPYIHGRRG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi239g00010 549 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 136 541 - -
Vivi239g00010 549 Pfam Protein kinase domain 280 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00010 549 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Vivi239g00010 549 Gene3D Transferase(Phosphotransferase) domain 1 278 545 - -
Vivi239g00010 549 MobiDBLite consensus disorder prediction 244 262 - -
Vivi239g00010 549 ProSiteProfiles Protein kinase domain profile. 279 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00010 549 SUPERFAMILY Protein kinase-like (PK-like) 269 537 IPR011009 -
Vivi239g00010 549 SMART serkin_6 279 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi239g00010 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Vivi239g00010 549 FunFam Mitogen-activated protein kinase 1, putative, expressed 277 544 - -
Vivi239g00010 549 MobiDBLite consensus disorder prediction 244 263 - -
Vivi239g00010 549 Coils Coil 110 130 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi239g00010 233 536 MAP Kinase Kinase Kinase AT4G08500 65.574 4.56e-135 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi239g00010 Pkinase 5.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi239g00010 K13414 - mtr:11419987 706.442