Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi238g00031 ATGGCTCTAATCTATGAGTATATGGCTAATGGAGATTTAGCCAACCACTTGTCTGATAAAAATAAAAATATACTGAGTTGGAATCAACGACTTCAAATTGCAGTTGAAGCAGCAGAAGGATTGGAGTATCTGCATCACGGCTGCAACCCACCAATTGTTCACAGAGATGTTAAATCTAAAAACATCTTACTAAATGAAAAACTCCAAGGTAAATTAGCTGATTTCGGATTGTCAAAGATCTTTCCTAATGAAGACTTTGCTTGA 264 0.3598 MALIYEYMANGDLANHLSDKNKNILSWNQRLQIAVEAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKLQGKLADFGLSKIFPNEDFA 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi238g00031 87 Gene3D Transferase(Phosphotransferase) domain 1 1 87 - -
Vivi238g00031 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi238g00031 87 Pfam Protein tyrosine and serine/threonine kinase 2 81 IPR001245 GO:0004672|GO:0006468
Vivi238g00031 87 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Vivi238g00031 87 SUPERFAMILY Protein kinase-like (PK-like) 2 85 IPR011009 -
Vivi238g00031 87 PANTHER OS07G0107800 PROTEIN-RELATED 1 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi238g00031 1 87 Receptor kinase-like Gene Family AT4G29180 66.667 1.11e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi238g00031 PK_Tyr_Ser-Thr 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi238g00031 - - vvo:131627332 181.03