Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi238g00008 ATGGGTAACGGCACTTCTCGTGTTGTTGGTTGTTTGGTGCCATTCAATGGTAAGAATGGTGTTGATTTGGAGTTTTTGGAGCCATTAGATGAAGGTTTGGGTCACTCTTTTTGTTATGTAAGACCGACGTTGTTTGAATCTCCTGCTATTAGTCCGTCGAATTCGGAGAGGTTTACTGTTGATTCGAGTACACTTGATTCTGAAACCTTGAGTGGTTCGTTTAGGCATGATAGCATGGAGGATTCTAACTGTTCTGGTTTACATAAGCCAGCTAAGAATTTTCCTGAAACTACGTTTAAAACGATTTCGGGGGCTTCTGTTAGTGCTAATGTTTCCACAGCGAGGACTGGTGGTAACCAGAGTGCATTGTTTGCTGGGGATTTCTTGGAACCTGCTGCGTCGTTTGAGGGAACTGCTTCTTTTGCTGCGATTCCTTTGCAGCCGGTTCCTCGTGGTTCTGGACCTTTGAATGGTTTTATGTCTGGTCCTTTGGAGAGAGGCTTTGCATCAGGTCCATTAGATAGAAGTGGCGGTTTCATGTCTGGGCCGATTGAGAAAGGAGTTATGTCAGGTCCTCTTGACGATACTGATAAATCAAACTTTTCGGCACCTCTTGCGCGTGGTCGCAGGAGGCCGCGTCTACAGCATCTCATGAGAAGTGTTAGTGGACTGATGAAGAACACATTTTCTCGAACGTTCTCTAAAAATTCCATGGGTGGAAGTTGGATGCAGAGGTTATTCTTTCAACCAGTTACTCAAATGGCATGGCATTCCAGAGACACGAAGTGTAAGCCAGAAGTGCCTAGGAACTGCGGTATTGACGTTGGATCATACGAAGCTGAGTATAAACATACACATAATTTGCAATGGGCTCAAGGAAAGGCTGGTGAAGATAGGGTTCATGTCGTTCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTTTGATGAGCCATCTTTATAGATTTCTAGACAAAGAACTCGAAGGCTTACTTTGGGATTATGAAGATAATCCTGTTGACGTACTTAAACCTGAAGTCCCTGAAACTATAAAAGCTACCGTTGCTCCAGAAGGCAGTACGAAAGAAATGTCTGAGGCTCATGCTAAATCTAATCATGAATGTTTTGAAGCTTCTTCTTGTCCTGAATTAATCAAGGACCAATCATTTAACAGTGAGATAGTCGAAGAAAATGCTGAAGTTAATGTAAATGTTGAACACCAGTTATCTAATTGTGGAAGTAACTCTACTGTTTCTGATTCTGTTCAACATGGAAAGTTGACCGGGAAAGGTAGGAAAAGTTTGAGGCTTTATGAACTACTTCAAATGGAATCTTGGGATGATCAATGTAATGATTCTTCAGTTCCACAGGAAACAAAACTAGATGGGCATATGAGATCTTGCTCGTCTAATGCAAGAGAAGATGGCTTTAGACATCAAGATGAAGGTCCGTCTACATCAGGAGAAAATGGAGGCACTAGGTTTGATTCAACCGATAAGGAGCACCAAGATGTTTTTTCTGTATCAAGACAGAATTCAAAGAAGTCATTCAGTGCAAAAATTAAAAAAATGTACAAGAAGCCAAGGTCCTTGTGTAAGAAACTCTTTCCTTGGAGTTATGATTGGCACAGGGAGGAGAGTAGCGTTGACGAGAAAATAATAGAAGCCTCGGGACCTATTAGGAAATGCAGGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCTCGAGCCCTTGAAAGAACAGAAGATGCATACATGGAAATGGCGGAGCATAATCTGGAAAAAAATCCAGAACTTGCTATAATGGGATCATGTGTTCTAGTGATGTTGATGAAGGATCAAGATGTTTATGTCATGAATCTGGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGATCAAACGATCGTCATCCTAATTCTATTTCTGTCAAGGATGACCTTAGGCATAGAAATCGATCCAGAGAGGCATTAGTACGCATGGAGCTGGATAGAATTTCAGAGGAGTCCCCAATTCACAACCAAAACAATCATGTTATCAAGATGAACAAAAACCGCGAGATATCCTTTTGCAAATTAAAAATGAGGGCTCTGCAGCTTTCTACAGATCATAGCACCAGTATTGAAGAGGAAGTATGCAGAATAAGAGCAGAACACCCTGATGATAGTCAAGCCATATTAAACGATCGTGTGAAAGGACATTTAAAAGTTACTAGAGCATTTGGTGCCGGTTTCTTGAAGAGGCCGTCTTTTAACGAAGCTCTACTGGAGGTGTTTCAAGTTAATTATATCGGCTCTGCTCCTTACCTAAGTTGCACCCCTTCTGTTCTTCACCACCGACTTTCATCAAGTGATCGATTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCAGAAGGCGATCCTGCACAATACCTTATTGCAGAGCTTCTCTTCTGTGCTGCTAAAAAGAATGGAATGGACTTTCATGAATTGCTTGATATTCCTCATGGAGATCGGCGTAAATATCACGATGATGTATCAGTCATGGTGGTTTCTTTGGAGGGAAGGATTTGGAGATCATCGGGATAA 2664 0.4174 MGNGTSRVVGCLVPFNGKNGVDLEFLEPLDEGLGHSFCYVRPTLFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEDSNCSGLHKPAKNFPETTFKTISGASVSANVSTARTGGNQSALFAGDFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRSGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQHLMRSVSGLMKNTFSRTFSKNSMGGSWMQRLFFQPVTQMAWHSRDTKCKPEVPRNCGIDVGSYEAEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFLDKELEGLLWDYEDNPVDVLKPEVPETIKATVAPEGSTKEMSEAHAKSNHECFEASSCPELIKDQSFNSEIVEENAEVNVNVEHQLSNCGSNSTVSDSVQHGKLTGKGRKSLRLYELLQMESWDDQCNDSSVPQETKLDGHMRSCSSNAREDGFRHQDEGPSTSGENGGTRFDSTDKEHQDVFSVSRQNSKKSFSAKIKKMYKKPRSLCKKLFPWSYDWHREESSVDEKIIEASGPIRKCRSGVDHNAVLRAMARALERTEDAYMEMAEHNLEKNPELAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQERSNDRHPNSISVKDDLRHRNRSREALVRMELDRISEESPIHNQNNHVIKMNKNREISFCKLKMRALQLSTDHSTSIEEEVCRIRAEHPDDSQAILNDRVKGHLKVTRAFGAGFLKRPSFNEALLEVFQVNYIGSAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi238g00008 887 MobiDBLite consensus disorder prediction 506 520 - -
Vivi238g00008 887 MobiDBLite consensus disorder prediction 460 521 - -
Vivi238g00008 887 MobiDBLite consensus disorder prediction 460 478 - -
Vivi238g00008 887 CDD PP2Cc 584 878 IPR001932 -
Vivi238g00008 887 MobiDBLite consensus disorder prediction 479 494 - -
Vivi238g00008 887 Pfam Protein phosphatase 2C 596 649 IPR001932 -
Vivi238g00008 887 Pfam Protein phosphatase 2C 710 826 IPR001932 -
Vivi238g00008 887 Gene3D - 480 884 IPR036457 -
Vivi238g00008 887 SMART PP2C_4 281 876 IPR001932 -
Vivi238g00008 887 SUPERFAMILY PP2C-like 293 879 IPR036457 -
Vivi238g00008 887 Gene3D - 269 440 IPR036457 -
Vivi238g00008 887 PANTHER PROTEIN PHOSPHATASE 2C 284 877 IPR015655 GO:0004722|GO:0006470
Vivi238g00008 887 ProSiteProfiles PPM-type phosphatase domain profile. 281 878 IPR001932 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi238g00008 1 887 PP2C-type Phosphatase Gene Family AT2G46920 63.768 0.0 1093
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi238g00008 - - pcin:129315875 1373.61