Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00025 ATGGTCAGTCAACTAAAGAGTCCAACACCCTCACCAGACACCAGTACTTCCTCCGATTTCTTACTCTTCATTTTGATACGTGAAAATTATTCTGCAATGGTTTTGCTTTCCTTTCTATGTTACTTGTTTGTCACAGCTATATCTCATGTGAAAGCCGGAGATTCTGTATCATGTGATAACAACAGAGGCAACTACACAGCCAACAGCACCTACGACAACAACCTTAAAACTCTTATATCCACTTTCTCTTCCCATAAACAAATCAACTACGGTTTCTACAATTTCTCATACGGACAAGATCCCGACAGAGCATACGCCATGGGACTATGTCGTGGAGATCAAGAACCAAACATGTGTCTTACAAAGTTAATCAACTCCTTCACCTATCTCAAACAACAATGTCCAAATCAAAGAGAGGCAATTGTATGGGGTGGTGAATTCACTCTATGGTACTCAAACCGTTCAATTTTCGGAATAGTAGAAACTTCACCTACAATATTTCTAGTATATGAAAGAAATGTAAGCGATGTGGATGCATACAACGAAGCACTGAGTAGCTTGATGACAAATCTAACGAACAAAGCTGCATCGGGTGACTCTCGTCGTAAGTATGATGCTGATAATGTTTACGAGCCGGGAAATTTTGTAACTATATATGGCTATGCGTTGTGTATGCCGGATTTGTCTTCGCAACAATGCAGTGATTGCTTGGAAGCAGCGGTTTCTCAAATACCGGTTTGTTGTAAGGGGAAGATGGGAGGAAATATTCTTCAACCAAGTTGTCGGATTAGATTTGATCCTTATCGGTTCTATAATTCAACGACTGTTTTGGATTCGAATGCAACGCCTCCTTCACCGTCGCTACAACCACCGTCAGTATTCACCAATAATACTTCATCAGGGCAGAGCAAAATACGAATTGTCATCATCTCCGTTGCAGTGGCAGCTGTTAGTATGGTTTTGATACTCATTTTTATTTGCATCTATTTAAGATTGGGAAAGCCAAAACAAATGTTTCAAGCAAATAACAGAAAACATAGTGGCGGAGATGAAGATGAAATTACAATTGTTGAGTCATTGCAATTCAACTTTGATATCATCCGAGCTGCTACAAATGATTTCTCTGATTCTAATAAACTTGGGCGGGGCGGATTTGGAATTGTTTATAGAGGTAAACTTCCTGATGGACAAATGATTGCTGTCAAAAGATTGTTACAAGAATCTAACCAAGGAGAAGGGGAATTTAAAAATGAAGTATTATTAGTAGCTCGACTTCAACATCGAAACCTAGTTAGACTACTTGGTTTTTGTTTTGAAGAGAATGAAAGGCTGCTTATTTATGAATTTGTTACAAATAAAAGTCTTGATTACTTCATATTTGATCCAATCAGGAAAGCTCAATTGAATTGGCAAATGCGCTATGAAATCATTAAAGGTATTGCTCGAGGTCTTCTTTATCTTCATGAGGATTCTCGTTTGCGGATTATACATCGTGATATCAAAGCAAGCAATATTCTATTAGACAACGAGATGAATCCTAAGATATCTGATTTTGGATTGGCAAGATTGTTTGTTATCGATCAAAGTCAAGGAAATACAAATAGAATCGTTGGAACCTATGGGTACATGGCACCAGAGTATGCAATGCATGGATTATTTTCAGTAAAATCAGATGTTTTTAGTTTCGGAGTATTGGTTCTTGAGATTATAAGCGGTCATAAAAATAGTGCAAACATTCGTCATGGAAATAATATCGAGTATCTATTGAGCTTTGCTTGGAAAAGTTGGAAGGAGGGGAAAGCTACAAATATTATAGATCCATCATTACAAAACTTTTCAATAAATGAAATAATGAGATGCATTCATATTGGTTTGCTTTGTATTCAAGAAGATGCAGCTGATAGACCAACCATGGCAGCTGTTGCTCTCATGCTTAATAGTTACTCTCTTAGTCTTGCAATACCTTCAAAGCCTGCATACTTTTATGGAAGTGGAACTGAAACTGGAAGCTTACATGACAAGCAACTATGGGCTGAAAATCAAAATGCAACGACGTCGAATGAATCGATAAACCAAGCTTCAAATACTGATCCGTACCCTCGATAG 2106 0.3775 MVSQLKSPTPSPDTSTSSDFLLFILIRENYSAMVLLSFLCYLFVTAISHVKAGDSVSCDNNRGNYTANSTYDNNLKTLISTFSSHKQINYGFYNFSYGQDPDRAYAMGLCRGDQEPNMCLTKLINSFTYLKQQCPNQREAIVWGGEFTLWYSNRSIFGIVETSPTIFLVYERNVSDVDAYNEALSSLMTNLTNKAASGDSRRKYDADNVYEPGNFVTIYGYALCMPDLSSQQCSDCLEAAVSQIPVCCKGKMGGNILQPSCRIRFDPYRFYNSTTVLDSNATPPSPSLQPPSVFTNNTSSGQSKIRIVIISVAVAAVSMVLILIFICIYLRLGKPKQMFQANNRKHSGGDEDEITIVESLQFNFDIIRAATNDFSDSNKLGRGGFGIVYRGKLPDGQMIAVKRLLQESNQGEGEFKNEVLLVARLQHRNLVRLLGFCFEENERLLIYEFVTNKSLDYFIFDPIRKAQLNWQMRYEIIKGIARGLLYLHEDSRLRIIHRDIKASNILLDNEMNPKISDFGLARLFVIDQSQGNTNRIVGTYGYMAPEYAMHGLFSVKSDVFSFGVLVLEIISGHKNSANIRHGNNIEYLLSFAWKSWKEGKATNIIDPSLQNFSINEIMRCIHIGLLCIQEDAADRPTMAAVALMLNSYSLSLAIPSKPAYFYGSGTETGSLHDKQLWAENQNATTSNESINQASNTDPYPR 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00025 701 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 57 697 - -
Vivi237g00025 701 FunFam cysteine-rich receptor-like protein kinase 10 450 652 - -
Vivi237g00025 701 Pfam Salt stress response/antifungal 175 266 IPR002902 -
Vivi237g00025 701 Pfam Salt stress response/antifungal 58 153 IPR002902 -
Vivi237g00025 701 CDD STKc_IRAK 380 646 - -
Vivi237g00025 701 Gene3D - 166 270 IPR038408 -
Vivi237g00025 701 Gene3D - 54 155 IPR038408 -
Vivi237g00025 701 Gene3D Transferase(Phosphotransferase) domain 1 450 653 - -
Vivi237g00025 701 FunFam Cysteine-rich receptor-like protein kinase 10 336 449 - -
Vivi237g00025 701 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Vivi237g00025 701 ProSiteProfiles Protein kinase domain profile. 374 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00025 701 SMART serkin_6 374 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00025 701 FunFam Cysteine-rich receptor-like protein kinase 10 164 270 - -
Vivi237g00025 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Vivi237g00025 701 Pfam Protein kinase domain 375 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00025 701 ProSiteProfiles Gnk2-homologous domain profile. 162 270 IPR002902 -
Vivi237g00025 701 MobiDBLite consensus disorder prediction 681 701 - -
Vivi237g00025 701 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 53 156 - -
Vivi237g00025 701 Gene3D Phosphorylase Kinase; domain 1 336 449 - -
Vivi237g00025 701 ProSiteProfiles Gnk2-homologous domain profile. 53 156 IPR002902 -
Vivi237g00025 701 SUPERFAMILY Protein kinase-like (PK-like) 355 645 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00025 34 660 Receptor kinase-like Gene Family AT4G21410 47.988 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00025 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00025 - - mtr:11442310 891.723