Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00023 ATGCCTCTCCTTCCCTTTCTTTGTTTTCTTTTTTTCATAATAGTTTCCCAAGCCAAAGTCAGAGGACTTGCATCATGTGATAACAACAGAGGCAACTACACAGCCAACAGCACCTACGACAACAACCTCAAAACCGTTATATCTAGTTTCTATTCTCATAAAGAAATTAACTACGGTTTCTACAATTTCTCGTATGGCCAGGATCCAAACAAAGTATATGCCATTGCAATGTGTAGCGGAGATCTTAACCCCAATGAGTGTCTAACATACCTAAACAGTTCTTTTACCGATCTTAGAGAGCAGTGTCCAAATCAAAAAGAGGCGATTGTTTGGAGTGGGAGTTTAACTTTGTGGTACTCTAATCGCTCAATATTTACGACAGTAGAATATAAACCTACAAAGGGTGTTGTAAATGGGGGAGTTGTACCCGACGTGGACAAGTTTAGCGAAGCACTGAATAAACTCTTGACAGATATTAAAGACAAAGCTGCAGCAGGTGACTCCCGTCTTAAATATGATGCAGCTAAGTATGAGAATGCAAATTTTAAGACTATATATGGTGCTGTGCAGTGTGTGCCTGATTTGTCATCGCAACAATGCATTGATTGCTTGGAAGATATAATTTCAGCAATTCCAATTTGTTGTAATGGCAGGAAAGGAGCACGAATTTATAAACCAAGTTGCCATCTTAGATATGAAATTTATAACTTCTCTAATGCTACCGTTGAGTTATACTCAGTTGCAACTCCACCATCACAATCCACCACTAACACTTCTTCGGGACACAACAAAACACGTACTGTCATCGCCATAGCAGTGCCATCTGTTTTTGTGGTTTTGGTAGCTATTCTTACCTATTTCTGTTTGCGGGTGAGAAAACCAAAACACAGTTTTGAAGCTAACAATGAAGAATACGAAGACGACGGAGAAGATGAAATAATGGTCGTTGAGTCATTGCAATTTAGCTTTGATACGATACAAGTTGCTACAAATCACTTTTCAAATTCAAATAAAATTGGGCATGGGGGATTTGGAGATGTTTATCGGGGTAAACTTTCTAATGGACAAAAAATTGCGGTCAAAAGGTTATCAATAGATTCTGCTCAAGGAGACAGGGAATTTAAAAATGAAGTAACATTAGTAGCCAAACTTCAACATCGGAATTTAGTCAAACTACTTGGTTTCAGTCTAGAAGGAAGGGAAAGATTACTTATTTACGAATTTGTTGTGAATAAAAGTCTAGATTACTTCATATTCGATCCGACAAAGAAAGCACTGTTGAATTGGGCCAATCGCTATGAAATCATAAGAGGTATTGCACGAGGTCTTCTTTATCTCCACGAGGATTCTCGCTTGCGTATTATTCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGACAGTGAGATGAATCCTAAAATAGCTGATTTTGGATTGGCAAAGTTGTTTGTTTTGGATCAAACTCAAGGAAATACTAATAGAATTGTTGGAACCTATGGATATATGGCACCAGAATATGCAATGCACGGACAATTTTCTGTAAAATCTGATGTATTTAGTTTTGGAATATTGGTTCTTGAGATAATAAGTGGTCAGAAAAATAGTACAAATATTTGTATTGGAAATGATGTTGAGTACCTACTAAGTTATGCATGGAAAAGCTGGAATGAGGGAAGAGCTACAAATATTATAGATCCATCATTACATAACATTTCACAAAATGAAATAATGAGATGCATTCATATTGGTTTACTATGTATTCAAGAAGAAGTGGAAGCCAGACCAACCATGGCTAGTGTTGCACTCATGCTTAATAGTCATTCTCTCACTCTTTCAATACCATCGAAACCCGCATATTTTTATGGAAGTGAAACTAGAAACTTACCAAATATTCAGATATCGGGTGGAAATCCTAATGGATCACATGAATCGATTAACCAGGTTTCAATTACTGATCCATACCCACGATAG 1971 0.3704 MPLLPFLCFLFFIIVSQAKVRGLASCDNNRGNYTANSTYDNNLKTVISSFYSHKEINYGFYNFSYGQDPNKVYAIAMCSGDLNPNECLTYLNSSFTDLREQCPNQKEAIVWSGSLTLWYSNRSIFTTVEYKPTKGVVNGGVVPDVDKFSEALNKLLTDIKDKAAAGDSRLKYDAAKYENANFKTIYGAVQCVPDLSSQQCIDCLEDIISAIPICCNGRKGARIYKPSCHLRYEIYNFSNATVELYSVATPPSQSTTNTSSGHNKTRTVIAIAVPSVFVVLVAILTYFCLRVRKPKHSFEANNEEYEDDGEDEIMVVESLQFSFDTIQVATNHFSNSNKIGHGGFGDVYRGKLSNGQKIAVKRLSIDSAQGDREFKNEVTLVAKLQHRNLVKLLGFSLEGRERLLIYEFVVNKSLDYFIFDPTKKALLNWANRYEIIRGIARGLLYLHEDSRLRIIHRDLKASNILLDSEMNPKIADFGLAKLFVLDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEIISGQKNSTNICIGNDVEYLLSYAWKSWNEGRATNIIDPSLHNISQNEIMRCIHIGLLCIQEEVEARPTMASVALMLNSHSLTLSIPSKPAYFYGSETRNLPNIQISGGNPNGSHESINQVSITDPYPR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00023 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Vivi237g00023 656 ProSiteProfiles Gnk2-homologous domain profile. 130 237 IPR002902 -
Vivi237g00023 656 FunFam cysteine-rich receptor-like protein kinase 10 409 611 - -
Vivi237g00023 656 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 653 - -
Vivi237g00023 656 SUPERFAMILY Protein kinase-like (PK-like) 313 604 IPR011009 -
Vivi237g00023 656 ProSiteProfiles Protein kinase domain profile. 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00023 656 FunFam Cysteine-rich receptor-like protein kinase 10 295 408 - -
Vivi237g00023 656 MobiDBLite consensus disorder prediction 631 656 - -
Vivi237g00023 656 Gene3D Transferase(Phosphotransferase) domain 1 410 612 - -
Vivi237g00023 656 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 20 124 - -
Vivi237g00023 656 SMART serkin_6 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00023 656 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Vivi237g00023 656 Gene3D Phosphorylase Kinase; domain 1 296 408 - -
Vivi237g00023 656 ProSiteProfiles Gnk2-homologous domain profile. 21 124 IPR002902 -
Vivi237g00023 656 FunFam Cysteine-rich receptor-like protein kinase 10 133 237 - -
Vivi237g00023 656 Pfam Protein tyrosine and serine/threonine kinase 336 601 IPR001245 GO:0004672|GO:0006468
Vivi237g00023 656 Pfam Salt stress response/antifungal 145 234 IPR002902 -
Vivi237g00023 656 Pfam Salt stress response/antifungal 26 121 IPR002902 -
Vivi237g00023 656 Gene3D - 133 237 IPR038408 -
Vivi237g00023 656 Gene3D - 21 123 IPR038408 -
Vivi237g00023 656 CDD STKc_IRAK 339 605 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00023 9 656 Receptor kinase-like Gene Family AT4G21410 47.267 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00023 PK_Tyr_Ser-Thr 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00023 - - mtr:11442310 840.106