Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00020 ATGGTCAGTCAACTCAAAAATCCTACACCCTCACCTCACTTTTATAGCACACCCTCACCTCATTCTCATCATTCTCATTCATACAAAACTTTTTTTACAATGCCTCTCCTTCCCTTTCTTTGTTTTCTTTTTTTCATAATAGTTTCCCAAGCCAAAGCCGGAGATTCTGTATCATACGGAGATCTTGTATCAAAGAGAGATCCTGCATCATGTGATAACGAAAGAGGCAATTACACAGCCACCAGCACCTACGACAACAACCTCAAAACCGTTATATCTAGTTTCTCTTCTCATAAAGAAATTAACTACGGCTTCTACAATTTCTCGTATGGCCAGGATCCAAACAAAGTATATGCCATTGGAATGTGTAGTGGAGATGTTAAGCCCAATGAGTGTCTAACATACCTAAACAGTTCTTTTGCCTATCTTAGAGAGAAGTGTCCAAATCAAAAAGAGGCGATTGTTTGGGGTTGGAATTTAACTTTGTGGTACTCAAATCGCTCAATATTTAGGATAGTGGATACCAAGCCTACAACGAGTTTAACATCTTCGGCAGCTGTAACCGACATGAACAAGTACAACGACGGACTGAATAAACTGTTGACAGATCTTAAAGACAAAGCTGCATCAGGTGACTCCCGTCGTAAATATGATGCAGATAAGTATGAGTATGCAAATTTTGAAACTATATATGGTTCTGTGCAGTGTGTGCCTGAATTGTCATCGCAACAATGTATTGATTGTTTGGAAGCAATAATTTCAGAAATTCCAATTTGTTGTAATGGCACGACGGGAGGACGACTTCTTAAACGAAGTTGCCATCTTAGATATGAAACTAATAGATTCTATAATGCTACCATTGAGTTAGACTCAGTTGCAACTCCACCATCACCATCCACCAATAACATTTCTTCAGGACACAACAAAACACGTACTGTCATCGCGATAGCAGTGCCATCTGTTTTTGTGGTTTTGGTAGCTATTCTTACATGTTTCTGTTGGCGGGTGAGAAAACCAAAACACGGTTTTGAAGCTAACAATGAAGAATACGAAGACGATGGAGAAGATGAAGTAATGGTTTTTGAGTCATTGCAATTTAGCTTTGATACTATACAGGTTGCTACAAATCGCTTTTCAAATTCAAATAAAATTGGGCATGGAGGATTTGGAGATGTTTATCGGGGTAAACTTTCTAATGGACAAATGATTGCGGTCAAAAGGTTATCAATAGATTCCGTTCAAGGAGACAAAGAATTTAAAAATGAAGTAACATTAGTAGCCAAACTTCAACATCGGAATTTAGTTAGGCTACTTGGTTTCAGTCTAGAAGGAAGAGAAAGACTACTTATTTATGAATTTGTTGTGAATAAAAGTCTAGATTACTTCCTATTCGATCCAACAAAGAAAACACTATTGAATTGGGGAAAGCGCTATGAAATCATAAAAGGTATTGCACGAGGTCTTCTTTATCTTCATGAGGATTCTCGCTTGCGCATTATACATCGTGATCTCAAAGCAAGTAACATTCTCTTAGACATTGAGATGAATCCTAAAATAGCTGATTTTGGATTGGCAAAGTTGTTTGTTCTCGACCAAACTCAAGGAAATACTAATAGAATTGTTGGAACCTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTTTCTGTAAAATCAGATGTATTTAGTTTTGGAGTATTGGTTCTTGAGATAATAAGTGGTCATAAAAATAGTTCAAATATTTGTGTTGGAAATGATGTTGAGTACCTACTGAGTTATGCATGGAAAAGCTGGAAAGAGGGAAGAGCGACAAATATTATAGATCCATTATTAAAAAACATTTCACAAAATGAAATAATGAGATGCCTTCATATTGGTCTACTCTGTCTTCAAGAAGAAGTAGAAGACAGACCAACCATGGCTAGTGTTGCACTCATGCTTAATAGTCATTCTATTACTCTATCAATACCTTCGAAGCCCGCTTATTTTTATGGAAGTGAAACTAGAAGCTTACAAAATATGCAGATATCAGATGGGAATCCTGATAGATCAACATCACATGAATCGATAAACGAGGCTTCAATTACTGATCCATATCCACGATAG 2112 0.3693 MVSQLKNPTPSPHFYSTPSPHSHHSHSYKTFFTMPLLPFLCFLFFIIVSQAKAGDSVSYGDLVSKRDPASCDNERGNYTATSTYDNNLKTVISSFSSHKEINYGFYNFSYGQDPNKVYAIGMCSGDVKPNECLTYLNSSFAYLREKCPNQKEAIVWGWNLTLWYSNRSIFRIVDTKPTTSLTSSAAVTDMNKYNDGLNKLLTDLKDKAASGDSRRKYDADKYEYANFETIYGSVQCVPELSSQQCIDCLEAIISEIPICCNGTTGGRLLKRSCHLRYETNRFYNATIELDSVATPPSPSTNNISSGHNKTRTVIAIAVPSVFVVLVAILTCFCWRVRKPKHGFEANNEEYEDDGEDEVMVFESLQFSFDTIQVATNRFSNSNKIGHGGFGDVYRGKLSNGQMIAVKRLSIDSVQGDKEFKNEVTLVAKLQHRNLVRLLGFSLEGRERLLIYEFVVNKSLDYFLFDPTKKTLLNWGKRYEIIKGIARGLLYLHEDSRLRIIHRDLKASNILLDIEMNPKIADFGLAKLFVLDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIISGHKNSSNICVGNDVEYLLSYAWKSWKEGRATNIIDPLLKNISQNEIMRCLHIGLLCLQEEVEDRPTMASVALMLNSHSITLSIPSKPAYFYGSETRSLQNMQISDGNPDRSTSHESINEASITDPYPR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00020 703 ProSiteProfiles Gnk2-homologous domain profile. 175 282 IPR002902 -
Vivi237g00020 703 FunFam Cysteine-rich receptor-like protein kinase 10 177 282 - -
Vivi237g00020 703 MobiDBLite consensus disorder prediction 675 695 - -
Vivi237g00020 703 ProSiteProfiles Protein kinase domain profile. 378 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00020 703 SMART serkin_6 378 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00020 703 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
Vivi237g00020 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Vivi237g00020 703 FunFam Cysteine-rich receptor-like protein kinase 10 341 453 - -
Vivi237g00020 703 MobiDBLite consensus disorder prediction 675 703 - -
Vivi237g00020 703 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 65 169 - -
Vivi237g00020 703 Pfam Salt stress response/antifungal 187 279 IPR002902 -
Vivi237g00020 703 Pfam Salt stress response/antifungal 71 166 IPR002902 -
Vivi237g00020 703 Pfam Protein kinase domain 379 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00020 703 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 700 - -
Vivi237g00020 703 SUPERFAMILY Protein kinase-like (PK-like) 358 649 IPR011009 -
Vivi237g00020 703 Gene3D Transferase(Phosphotransferase) domain 1 455 658 - -
Vivi237g00020 703 FunFam cysteine-rich receptor-like protein kinase 10 454 656 - -
Vivi237g00020 703 Gene3D - 175 282 IPR038408 -
Vivi237g00020 703 Gene3D - 68 168 IPR038408 -
Vivi237g00020 703 CDD STKc_IRAK 384 650 - -
Vivi237g00020 703 Gene3D Phosphorylase Kinase; domain 1 342 453 - -
Vivi237g00020 703 ProSiteProfiles Gnk2-homologous domain profile. 66 169 IPR002902 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00020 39 664 Receptor kinase-like Gene Family AT4G21410 48.995 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00020 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00020 - - mtr:11442310 870.152