Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00017 ATGCCTCTGCTTTCCTTTTCCTTTCTTTGTTATGTGTTTTTTATAACTATATCCCAAGCCAGAGCTGGAGATCGGGTATCATGTGATAACGACAGAGGCAACTACACAACCAACAGCCCCTACGGCAACAACCTTAAAACCCTTTTATCCAGTTTCACTTCTCATACAGAAATTAACTACGGTTTCTACAATTTCTCATATGGCAAAGATCCAGATAAAGCATACGCCATTGGATTGTGTCGTGGAGATATTGAGCCAAATCAGTGTCTTACAGACATAAATAATTCCTTTTCCTATCTCAAAGAACAGTGTCCAAATCAAAAGGAGGCAATTGTGTGGGGTGCTGAATTAACTTTGTGGTACTCAGATCGCTCAATATTTGGGATAGTAGATACTTACACTCCAATATATTTAGGCTTTGAATCTGAAAGGAATTCAACTGATGTGGATGCATACAGCGACGCACTGAGTAAGTTGATGAGAAAACTTAAAGACAAAGCTGCATCAGGTGACACCCGTAGTAAATATGACGCGGATATTGGGATTGATCCTGTGAAAAATGAAACTATATACGGTTTTGTGCAGTGTGTGCCTGATTTGTCATCGCAACAATGCGATGATTGCTTGGAAGAAGCAATTTCAGAAATTCCTTATTGTTGTAATGGCAAAATGGGAGGAAATATTCTTAAACCAAGTTGTCGTCTAAGATATGAACCTTATCTCTTCTACAATTCAACCATTGTGTTAGACTCACTACCAACCACCAATAACGCTTCTTTAGGAGGACATAGTAAAACCCGAATCATCATCGTCACTGTAGTTCCGGGTGTTACCGTGGTTTTGATACTTATTTTTATTTGCATTTATTTAAGACTCAGAAAGCCAAAACAAAAATTTAAAGCTTACATTGGAAAATATGATGATAGAGATGAAGAAGAAATCACCAATGTTGAGTCATTGAGATTTAACTTTAATTTCATACTACTTGCTACAAATGGCTTCTCTAATTCTAATAAACTTGGACAAGGTGGATTTGGAGTGGTTTATCTGGGAAAATTGCCAAATGGCCACATGATTGCAGTTAAAAGGTTGTCAACAAATTCTGCCCAAGGAGACGAAGAATTTAAAAATGAAGTACTATTAGTAGCGAAGCTTCAGCATCGAAACTTAGTTAGGTTACAGGGTTTTACATTAGAAGGAAGAGAAAGGCTACTAATTTATGAATATGTTTCAAATAAAAGTCTTGATTTCTTCATATTTGATTCAACAAGGAAAACACAGTTGAATTGGGAAAAGCGCTACAATATCATAAAAGGTATTGCACGAGGTCTTCTTTATCTTCATGAAGATTCCCGCCTACGCATTATACATCATGATCTTAAAGCAAGCAATATTCTTTTAGACGACGAGATGAATCCTAAGATATCTGATTTTGGATTGGCAAGATTGTGTATTGAAGATGAAACTCAAGGATGTACGAATAGAATTGTTGGAACCTATGGATATATGGCACCAGAGTATGTGATGTATGGAGAATTTTCAGTAAAATCAGATGTTTTTAGTTTTGGAGTATTAGTTCTTGAAATTATAAGTGGTCATAAAAATAGTGCAAGCATTTGTCACGGGGAGAATATGGAATATCTATTGAGCTATGCATGGAGAAGCTGGATAGAGGGGAACGCAACTAATATTATAGATCCATCTTTAAACAACATTTCACAAAATGAAATAATGAGATGCATTCATATTGGTTTACTCTGTATTCAAGAAAATATAGTTGACAGACCAACCATGGCAACTGTTGCACACATGCTTAATAGTTATTCACTCACTCTCTCGATACCTTCCAAACCTGCATACTTTATGGGAAGTGGACCTAAAAGGCTACAAGATATGGAGCCACTGGTTGCTGATGCAGCTGCAACAAGATTTGATGAATCGATTAACCAAGTTTCAATTACTGAACCATACCCTCGATAG 1980 0.3657 MPLLSFSFLCYVFFITISQARAGDRVSCDNDRGNYTTNSPYGNNLKTLLSSFTSHTEINYGFYNFSYGKDPDKAYAIGLCRGDIEPNQCLTDINNSFSYLKEQCPNQKEAIVWGAELTLWYSDRSIFGIVDTYTPIYLGFESERNSTDVDAYSDALSKLMRKLKDKAASGDTRSKYDADIGIDPVKNETIYGFVQCVPDLSSQQCDDCLEEAISEIPYCCNGKMGGNILKPSCRLRYEPYLFYNSTIVLDSLPTTNNASLGGHSKTRIIIVTVVPGVTVVLILIFICIYLRLRKPKQKFKAYIGKYDDRDEEEITNVESLRFNFNFILLATNGFSNSNKLGQGGFGVVYLGKLPNGHMIAVKRLSTNSAQGDEEFKNEVLLVAKLQHRNLVRLQGFTLEGRERLLIYEYVSNKSLDFFIFDSTRKTQLNWEKRYNIIKGIARGLLYLHEDSRLRIIHHDLKASNILLDDEMNPKISDFGLARLCIEDETQGCTNRIVGTYGYMAPEYVMYGEFSVKSDVFSFGVLVLEIISGHKNSASICHGENMEYLLSYAWRSWIEGNATNIIDPSLNNISQNEIMRCIHIGLLCIQENIVDRPTMATVAHMLNSYSLTLSIPSKPAYFMGSGPKRLQDMEPLVADAAATRFDESINQVSITEPYPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00017 659 ProSiteProfiles Gnk2-homologous domain profile. 134 242 IPR002902 -
Vivi237g00017 659 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Vivi237g00017 659 Pfam Salt stress response/antifungal 144 239 IPR002902 -
Vivi237g00017 659 ProSiteProfiles Gnk2-homologous domain profile. 23 126 IPR002902 -
Vivi237g00017 659 Pfam Protein kinase domain 335 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00017 659 SMART serkin_6 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00017 659 Gene3D - 136 242 IPR038408 -
Vivi237g00017 659 Gene3D - 25 125 IPR038408 -
Vivi237g00017 659 FunFam Cysteine-rich receptor-like protein kinase 10 294 409 - -
Vivi237g00017 659 ProSiteProfiles Protein kinase domain profile. 334 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00017 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Vivi237g00017 659 Gene3D Phosphorylase Kinase; domain 1 298 409 - -
Vivi237g00017 659 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Vivi237g00017 659 FunFam Cysteine-rich receptor-like protein kinase 10 137 242 - -
Vivi237g00017 659 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 126 - -
Vivi237g00017 659 SUPERFAMILY Protein kinase-like (PK-like) 316 605 IPR011009 -
Vivi237g00017 659 CDD STKc_IRAK 340 606 - -
Vivi237g00017 659 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 656 - -
Vivi237g00017 659 Gene3D Transferase(Phosphotransferase) domain 1 410 613 - -
Vivi237g00017 659 FunFam cysteine-rich receptor-like protein kinase 10 410 612 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00017 31 659 Receptor kinase-like Gene Family AT4G21410 47.304 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00017 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00017 - - mtr:11442310 903.279