Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00015 ATGACAATTGTTACTTGCAAATTATTATTTTCCCTTTATTCTCTTCTCCTTCTTGTTATTGTATCTCTAACCAAAGCCCAGCCAAATTTTTTGTACAACTTTTGTATAAATGATAAAGGAAACTACACAACCAATAGCACATATCAAAACAATCTCAACACCCTTTTGTCCAATCTCACATCCAACACACAAATCAACTACGGTTTCTATAATTTCTCCCACGGCCAAAACAACGACAAAGTTAACGCAATTGGACTCTGCAGAGGAGATGTTAAACCAGATGTTTGCCGCAGTTGTCTCAATGACTCAAGAGTTCTTCTCCCGAAGCTCTGTCCAAATCAAAAAGAAGCTATAGGTTGGTATGATAACTGCATGTTACGCTACTCGAACCGATCAATATTTGGTATTAATGAAGAATCACCTACTTTTTATATATGGAACATTTACAACACATCAGAGGTTGATCAATTAAATCAAGTTCTCGGGAACTTGATGACGAAATTGAAGGAAAAAGCAGCATCAAGTGATTCTCGTCGTAAGTTTGCCACGGATAATGACACTGATGTTAATTTTCAAACCATATACGGTCTTGTGCAGTGTACACCTGATTTGTCATATCAAGATTGTACTGATTGTTTAGAAGCTGCTATCTCGGAAATTTCTTGTTGTAATGACAAGAAAGGTGCGAGAGTTAATAAACCAAGTTGTAATATTAGATATGAAAACTATCGCTTCTACAATCTCACACCTATAATAGACCTAGAAAAAACCTCTCCTCCACCACAAGAAAAAAGAAAATCATCGCATACTACCATCGCCATAGTAGTGCCTATTGTTGTCGTTGTTGCTGCTCTCCTAAGTTTTATTTGCGTATACTTAATGAGAAGTAAGCCAAAGTTAAATCATGAAGAAGTAGAACACGATCACGATGATATTGAAATCGAGGAGTCATTGCAATTCAATTTTGATACAATACAAGTTGCAACAAAAAACTTTTCTAAAGCTAATAAACTCGGACATGGCGGATTTGGAATTGTTTATCAAGGGACACTCTCTACTGGACAAGTGATTGCAGTAAAACGGTTGTCAAAAGGTTCTGGTCAAGGAGATAGTGAATTTAAGAATGAAGTGCATTTATTGGCTAAACTTCAACATCGAAATTTAGTTCGACTACTTGGTTTTTGTTTAAACGGAATAGAAAGACTACTTATCTATGAATTTGTTCCTAATAAAAGTCTCGACTACTTTTTATTTGATCCACTAAAGAGAGCACAATTAGACTGGGAAAGACGCTATAAAATTATTGAAGGTATTGTTAAAGGACTTCTCTACCTTCACGAGGATTCTGGACTTCACATTATACATCGCGATCTTAAAGCAAGTAATATTCTCTTGGACAACAATATGAATCCTAAAATATCAGATTATGGTATGGCCAGACTACTACTTGTTGATCAAACTCAAGTAAATACAGATAAAATCATTGGAACATATGGATATATGGCTCCTGAATATGCAATGTTTGGACAATTTTCAATAAAATCAGATGTTTTTAGTTTTGGAGTACTAATTATAGATATTATTAGTGGCCTGAAAGTTTGTGGCATTCTTCATGAGCAGAGTATGGAAGACTTACTTGGCTTTGTGTGGAGAAACTGGAGGGAGGGTACAATCACAAATATAATTGATCCATCATTAAACAATAGTTCACAAAATGAAATAATGAGATGCATTCACATTGGTTTACTATGTGTCCAAGAAAAAGTGGTTGAAAGGCCAACTATGGCTACTATTGCACTCATGCTTAATAGTTATTCAGTTTCTTTACCGCTCCCTTTGGAGCCTGCTTCTTTTATAGGTGGCAGAACTGGAAATCTTTCAATTTCAGACATGCAATCTGGTGAAGATAGTGCAGGGATAATAAGGTCAAGTTAA 1935 0.3545 MTIVTCKLLFSLYSLLLLVIVSLTKAQPNFLYNFCINDKGNYTTNSTYQNNLNTLLSNLTSNTQINYGFYNFSHGQNNDKVNAIGLCRGDVKPDVCRSCLNDSRVLLPKLCPNQKEAIGWYDNCMLRYSNRSIFGINEESPTFYIWNIYNTSEVDQLNQVLGNLMTKLKEKAASSDSRRKFATDNDTDVNFQTIYGLVQCTPDLSYQDCTDCLEAAISEISCCNDKKGARVNKPSCNIRYENYRFYNLTPIIDLEKTSPPPQEKRKSSHTTIAIVVPIVVVVAALLSFICVYLMRSKPKLNHEEVEHDHDDIEIEESLQFNFDTIQVATKNFSKANKLGHGGFGIVYQGTLSTGQVIAVKRLSKGSGQGDSEFKNEVHLLAKLQHRNLVRLLGFCLNGIERLLIYEFVPNKSLDYFLFDPLKRAQLDWERRYKIIEGIVKGLLYLHEDSGLHIIHRDLKASNILLDNNMNPKISDYGMARLLLVDQTQVNTDKIIGTYGYMAPEYAMFGQFSIKSDVFSFGVLIIDIISGLKVCGILHEQSMEDLLGFVWRNWREGTITNIIDPSLNNSSQNEIMRCIHIGLLCVQEKVVERPTMATIALMLNSYSVSLPLPLEPASFIGGRTGNLSISDMQSGEDSAGIIRSS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00015 644 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Vivi237g00015 644 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Vivi237g00015 644 FunFam Cysteine-rich receptor-like protein kinase 10 141 245 - -
Vivi237g00015 644 FunFam cysteine-rich receptor-like protein kinase 10 408 609 - -
Vivi237g00015 644 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 627 - -
Vivi237g00015 644 ProSiteProfiles Gnk2-homologous domain profile. 139 245 IPR002902 -
Vivi237g00015 644 Pfam Protein tyrosine and serine/threonine kinase 335 599 IPR001245 GO:0004672|GO:0006468
Vivi237g00015 644 Gene3D Phosphorylase Kinase; domain 1 294 407 - -
Vivi237g00015 644 CDD STKc_IRAK 338 603 - -
Vivi237g00015 644 Gene3D - 140 245 IPR038408 -
Vivi237g00015 644 Gene3D - 27 132 IPR038408 -
Vivi237g00015 644 ProSiteProfiles Protein kinase domain profile. 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00015 644 Pfam Salt stress response/antifungal 154 243 IPR002902 -
Vivi237g00015 644 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Vivi237g00015 644 SUPERFAMILY Protein kinase-like (PK-like) 316 602 IPR011009 -
Vivi237g00015 644 FunFam Cysteine-rich receptor-like protein kinase 10 295 407 - -
Vivi237g00015 644 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Vivi237g00015 644 SMART serkin_6 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00015 644 Gene3D Transferase(Phosphotransferase) domain 1 408 609 - -
Vivi237g00015 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00015 11 612 Receptor kinase-like Gene Family AT4G05200 50.241 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00015 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00015 - - gmx:100791056 785.793