Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00014 ATGCCTCTCCTTCCCTTTCTTTCTATTCTTTTTTTCAGAATAGTATCCCAAGCCAAAGCCGGAGATACTGGATCATGTGATAACTACATAGGTAACTACACAGCGGACAGCGAATATGACAACAACCTCCAAACCCTTATATCTAGTTTCTATTCTCATAAAGAAATTAACTACGGCTTCTACAAATTCTCAAATGGCCTGGATCCAAACAAAGCAAACGCCATTGGAATGTGTAGTGGAGATCTTAAGCCCAATGAGTGTCTAACATACCTAAGCAATTCTTTTGCCGATCTTAGAGAGCAGTGTCCAAATCAAAAAGAGGCAATTATGTGGGGTGGGAGTTTCACTTTGTGGTACTCAAATCGCTCAATATTTAGGATAGTGGAAACCAAACCTACAACGATTTTGTTATCTTCGTCACCTGTAACCGACATGGACAAGTACAACGATGCACTGAATAAACTGATGACAAATCTTACAGACAAAGCTGCATCAGGTGACTCCCGTCGTAAATATGATGCAGATAAGTATGAGTATGCAAATTTTGAAACTATATATGGTTCTGTGCAGTGTGTGCCTGAATTGTCATCGCAACAATGTATTGATTGTTTGGAAGCAATAATTTCAGAAATTCCAATTTGTTGTAATGGCACGACGGGAGGACGACTTCTTGAACCAAGTTGCCGTCTTAGATATGAAACTTATAGATTCTATAAATCTACCATTGAGTTAGACTCAGTTGCAACTCCACCATCGCAATCCACCAATAACACTTCTTCAGGACATAACAAAACACGTACTGTCATTGCCATAGCATTGCCATCTGTGTTTGTGGTTTTAGTAGCTATTCTTATATGTTTCTGTTTGCTGGGGAGAAAGCCAAAACACAGTTTTGAAGATTCAACAAGGAAAATACAGTTGAATTGGGAAAAGCGCTACAATATCATAAAAGGTATTGCCCGAGGTCTTCTTTATCTTCATGAAGATTTCCGCCTACGCATTATACATCGTGATCTCAAAGCAAGCAATATTCTTTTAGACGACGAGATGAATCCTAAGATATCTGATTTTGGATTGGCAAGATTGTGTATAAAAGGTGAAACGCAAGGAAGTACAAATAGAATTGTTGGAACCTATGGATATATGGCACCAGAGTATGTGATGTATGGAGAATTTTCAGTAAAATCAGATGTTTTTAGTTTTGGAGTATTAGTTCTTGAAATTATAAGTGGTCATAAAAATAGTGCAAGCATTTGCCATGGGGAGAATATGGAATATCTACTGAGCTACGCATGGAGAAGCTGGATAGAGGGGAACGCAACTAATATTATAGATCCATCTTTAAACAACATTTCACAAAATGAAATAATGAGATGCATTCATATTGGTTTACTCTGTATTCAAGAAAATATAGTTGACAGACCAACAATGGCTACTGTTGCACACATGCTTAATAGTTATTCTCTCACTCTCTCGATACCTTCCAAACCTGCATATTTTATGGGAAGTGGACCTAAGAAGCTACCAGATATGGAGCCACTGGTTGCTGATGCAGCTGCAACAATATTTGATGAATCGATTAACCAAGTTTCAATTACTGAACCATACCCTCGATAG 1617 0.3797 MPLLPFLSILFFRIVSQAKAGDTGSCDNYIGNYTADSEYDNNLQTLISSFYSHKEINYGFYKFSNGLDPNKANAIGMCSGDLKPNECLTYLSNSFADLREQCPNQKEAIMWGGSFTLWYSNRSIFRIVETKPTTILLSSSPVTDMDKYNDALNKLMTNLTDKAASGDSRRKYDADKYEYANFETIYGSVQCVPELSSQQCIDCLEAIISEIPICCNGTTGGRLLEPSCRLRYETYRFYKSTIELDSVATPPSQSTNNTSSGHNKTRTVIAIALPSVFVVLVAILICFCLLGRKPKHSFEDSTRKIQLNWEKRYNIIKGIARGLLYLHEDFRLRIIHRDLKASNILLDDEMNPKISDFGLARLCIKGETQGSTNRIVGTYGYMAPEYVMYGEFSVKSDVFSFGVLVLEIISGHKNSASICHGENMEYLLSYAWRSWIEGNATNIIDPSLNNISQNEIMRCIHIGLLCIQENIVDRPTMATVAHMLNSYSLTLSIPSKPAYFMGSGPKKLPDMEPLVADAAATIFDESINQVSITEPYPR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00014 538 ProSiteProfiles Gnk2-homologous domain profile. 21 124 IPR002902 -
Vivi237g00014 538 ProSiteProfiles Protein kinase domain profile. 157 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00014 538 FunFam cysteine-rich receptor-like protein kinase 10 294 491 - -
Vivi237g00014 538 Gene3D Transferase(Phosphotransferase) domain 1 295 492 - -
Vivi237g00014 538 Gene3D - 131 237 IPR038408 -
Vivi237g00014 538 Gene3D - 23 123 IPR038408 -
Vivi237g00014 538 Pfam Salt stress response/antifungal 26 121 IPR002902 -
Vivi237g00014 538 Pfam Salt stress response/antifungal 143 235 IPR002902 -
Vivi237g00014 538 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 300 535 - -
Vivi237g00014 538 ProSiteProfiles Gnk2-homologous domain profile. 130 237 IPR002902 -
Vivi237g00014 538 SUPERFAMILY Protein kinase-like (PK-like) 304 484 IPR011009 -
Vivi237g00014 538 FunFam Cysteine-rich receptor-like protein kinase 10 132 237 - -
Vivi237g00014 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Vivi237g00014 538 SMART serkin_6 179 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00014 538 Pfam Protein kinase domain 303 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00014 255 538 Receptor kinase-like Gene Family AT4G21410 50.167 1.34e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00014 Pkinase 2.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00014 - - vvo:131627279 1087.02