Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00013 ATGGCAATTGTTACTACCAAGTTATTATTTTCCCTTTATTCTCTTCTCCTTCTTTTTATTGTATCTCTAACCAAAGCCCAGTCAAATTTTTTGTACAACTTCTGTCTAAATGATAAAGGAAACTACACAACCAATAGCACATATCAAAACAATCTCAACACCCTTTTGTCTAATCTCACTTCCAACACACAAATCAACTACGGTTTCTACAATTTCTCCCACGGCCAAAACAACGACAAAGTTAACGCAATTGGACTCTGCAGAGGAGATGTTAAACCAGATGTTTGCCGCAGTTGTCTCAATGATTCAAGAGTTCTTCTCACAAAGCTTTGTCCAAATCAAAAAGAAGCTATTGGTTGGTATGATAACTGCATGTTACGCTACTCGAACCGATCAATATTCGGTATTAACGAAGAATCACCTACTTTTTATATGTGGAACAATTACAACGCATCAGAGGTTGATCAATTTAATAAAGTTCTCGGGAACTTGATGACGAAATTGAAGGAAAAAGCAGCATCAAGTGATTCTCGTCGTAAGTTTGCCACGGATAATGACACTGATGTTAATTTTCAAACCATATACGGTCTTGTGCAGTGTACACCTGATTTGTCATATCAAGATTGTAGTGATTGTTTAGAAGCTGCTATCTCAGAAATTCCTAGTTGTTGTAATAACAAGAAAGGTGGGAGAGTTGTTAAAGCAAGTTGTAATATCAGATATGAAACCTATCGCTTCTATGATCCCACACCTATAATAGATCTGGAAAAAACCTCTCCTCCACCACAAAGTTCACCACAAGAAAAAAGCAAATCATCGCATACTACCATCACCATAGTAGTGCCTATTGTTGTCGCTGTTGTTGTTGTTGCTGCTCTCCTAAGTTTCATTTGCATATACTTAATGAAAAGTAAGCCAAAGATGAATCATGAAGAAATAGAACACGATCACGATGATATTGAAATCGAGGAGTCATTGCAATTCAATTTCGATACAATACAAGTGGCAACAAATAACTTTTCTGAAGCTAATAAACTCGGACATGGCGGATTTGGAATTGTTTATCAAGGAACACTCTCTACTGAACAAGTGATTGCAGTAAAACGGCTGTCAAAAGGTTCTGGTCAAGGAGATAGTGAATTTCAGAATGAAGTGCAATTATTGGCTAAACTTCAACATCGGAATTTAGTTCGACTACTTGGTTTTTGTTTAAAAGGAAAAGAAAGACTACTTATCTATGAATTTGTTCCTAATAAAAGCCTCGACTACTTTTTATTTGATCCACTAAAGAGAGCTCAATTAGACTGGGAAAGACGCTATAAAATTATTGAAGGTATTGTTAAAGGACTTCTTTACCTTCACGAGGATTCTCGACTTCGCATTATACATCGTGATCTTAAAGCAAGTAATATTCTCTTGGACAACAATATGAATCCTAAAATATCAGATTTTGGTATGGCCAGACTACTACTTGTTGATCAAACTCAAGTAAATACAGATAAAATCGTTGGAACATATGGATATATGGCTCCTGAATATGCAATGTTTGGACAATTTTCAATAAAATCAGATGTTTTTAGTTTTGGAGTACTAATTCTAGAGATTATAAGTGGCCTGAAAGTTTGTGGCATTCTTCATGAGCAGAGTATGGAAGACTTACTTAGCTTTGTGTGGAGAAATTGGAGGGAGGGTACAATCACAAATATAATTGATCCATCATTAAACAATAGTTTACAAAATGAAATAATGAGATGCATTCACATTGGTTTACTATGTGTTCAAGAAAAAGTGGTTGAAAGGCCAACTATGGCTACTATTGCACTCATGCTTAATAGTTATTCAGTCTCTTTACCTTTCCCTTTGGAGCCTGCATCTTTTATAGGAGGCAGAACTGGAAGTCTTTCAATTTCAGACATGCAATCTGGTGAAAATAGTGCAGGGATAATAAGGTCAAGTCAATCCAAGAGTATATCAACAAATGATGATTCAAGTGATGAGTTATCGGCATGTGGGTGA 2016 0.3586 MAIVTTKLLFSLYSLLLLFIVSLTKAQSNFLYNFCLNDKGNYTTNSTYQNNLNTLLSNLTSNTQINYGFYNFSHGQNNDKVNAIGLCRGDVKPDVCRSCLNDSRVLLTKLCPNQKEAIGWYDNCMLRYSNRSIFGINEESPTFYMWNNYNASEVDQFNKVLGNLMTKLKEKAASSDSRRKFATDNDTDVNFQTIYGLVQCTPDLSYQDCSDCLEAAISEIPSCCNNKKGGRVVKASCNIRYETYRFYDPTPIIDLEKTSPPPQSSPQEKSKSSHTTITIVVPIVVAVVVVAALLSFICIYLMKSKPKMNHEEIEHDHDDIEIEESLQFNFDTIQVATNNFSEANKLGHGGFGIVYQGTLSTEQVIAVKRLSKGSGQGDSEFQNEVQLLAKLQHRNLVRLLGFCLKGKERLLIYEFVPNKSLDYFLFDPLKRAQLDWERRYKIIEGIVKGLLYLHEDSRLRIIHRDLKASNILLDNNMNPKISDFGMARLLLVDQTQVNTDKIVGTYGYMAPEYAMFGQFSIKSDVFSFGVLILEIISGLKVCGILHEQSMEDLLSFVWRNWREGTITNIIDPSLNNSLQNEIMRCIHIGLLCVQEKVVERPTMATIALMLNSYSVSLPFPLEPASFIGGRTGSLSISDMQSGENSAGIIRSSQSKSISTNDDSSDELSACG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00013 671 SUPERFAMILY Protein kinase-like (PK-like) 324 610 IPR011009 -
Vivi237g00013 671 Gene3D Transferase(Phosphotransferase) domain 1 416 617 - -
Vivi237g00013 671 FunFam cysteine-rich receptor-like protein kinase 10 416 617 - -
Vivi237g00013 671 CDD STKc_IRAK 346 611 - -
Vivi237g00013 671 Pfam Protein tyrosine and serine/threonine kinase 343 606 IPR001245 GO:0004672|GO:0006468
Vivi237g00013 671 MobiDBLite consensus disorder prediction 645 671 - -
Vivi237g00013 671 Gene3D - 140 246 IPR038408 -
Vivi237g00013 671 Gene3D - 27 132 IPR038408 -
Vivi237g00013 671 FunFam Cysteine-rich receptor-like protein kinase 10 302 415 - -
Vivi237g00013 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 661 - -
Vivi237g00013 671 ProSiteProfiles Protein kinase domain profile. 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00013 671 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Vivi237g00013 671 Pfam Salt stress response/antifungal 150 244 IPR002902 -
Vivi237g00013 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Vivi237g00013 671 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Vivi237g00013 671 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Vivi237g00013 671 SMART serkin_6 340 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00013 671 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Vivi237g00013 671 FunFam Cysteine-rich receptor-like protein kinase 10 141 246 - -
Vivi237g00013 671 Gene3D Phosphorylase Kinase; domain 1 302 415 - -
Vivi237g00013 671 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00013 11 663 Receptor kinase-like Gene Family AT4G05200 48.649 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00013 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00013 - - gmx:100791056 802.357