Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00012 ATGTTTCAGCTCCTCTTTCTCTTCGTGTGCCTTACCTCAATAACTTCAACATCATCATCACTATCTCCAACTTACAATGATATTTACTGTCCAAACAACAAAACCTTCGAATCCAACAACAACACAATACTCAAATCAAATCTCAATGTCCTCCTCTCCTCTCTCGTCACCAACGCCACGCTAGGCGGCGCTGACTTCTACTCAACCTTCATGGGATTGGGAACAACAAACGTGGTCAACGGTGTTTTCCTCTGTCGCGGTGATGTTAACTCCACCGCGTGTCAGAGTTGTGTAATCACTGCAGCTACAAATATAACACGCTTATGTCCTAACAAAACGGAGTCAATTATATGGTTTGATGAATGCATGCTGCGTTACTCTAACCGGTATTTTAGTCCTACCAGTATCGTCCCAAGAGCGAATTTGAATAACGGGAAGAACATCACTACCTCAAAATTGGATAGCTTTAATGTAACGTTGATGAGTTTCTTGGATAAGTTAGCTACGGAAGCTGCAGATTCTCAGACAACAACGCAATTCGCGATTGGAGAAGATAACTTCAACTTAAGCATAAGCAGCTCTTCGGTTTATGGGTTGGCGCAGTGTGTCAATGGATTGACCAATGTCCAGTGTGAGGAATGTTTAGTAAATGCGGCGAGAACACTTCTGACTTGTTGTGAAGGAAAACAAGGTGCTAGAGCTCTTCTAGCATGGTGTAACATCAGATATGATTCCTACAAGTTTTACAATACAACAGATGTTTCATCTTCGCTTCCGCCTCCTTCTTCCGGAAAGAACAAGTCCGGGTCAAAAACAAGAATGGTCTTGATTGTTGTTATTGTTATCGGGTCAACAATTCTACTTTGTTTAGGCTGCTATTTCCTCATCAGAAGATCAGCTTGGAAGAAATATAAAACTCTTATGAGAGAAAATTTTGGTGATGAAAGTGCGGCGTTACAGTCACTGCAGTATAGTTTAGCCACAGTTGAGGCAGCCACAAAGAAATTTTCATCAGAGAATAAAATAGGCAGGGGAGGATTTGGAGAGGTTTACAAGGGTATTCTTATAGATGGAAGGCAAATAGCTGTGAAAAAGCTATCTCTGAGTTCAGGACAAGGTGCAGTAGAGTTCATAAATGAGGTTTTACTAATAGCCAAACTTCAACATAGAAATTTGGTAACCTTAATAGGCTTTTGCTTGGAGGACCAAGAGAAAATGCTCATTTACGAATATGTGCCCAACAAAAGTCTTGATTACTTTCTATTTGATCCCAACAAGACTAGATTCCTACAGTGGTTTGAACGTTATAACATCATCGAAGGAATTGCACATGGCATACATTATCTACACAACCATTCAAGGTTGAAGATTATTCATCGTGATCTCAAACCAAGTAATCTGTTGTTAGATGATAATATGAATCCCAAAATATCTGATTTCGGCATGGCAAGAATGGTCGCTCTAGATCAAGATCGGGGAAGTACAAACAGAATTGTTGGAACATACGGCTATATGTCTCAAGAATACGCAATGTATGGACAATATTCAGAAAAATCAGACGTATTTAGTTTTGGAGTCATAATTTTGGAGATAATTAGTTCAAAAAGAAATGCTCGTTCTCTTTTATCAGATAGCGACGATGACCTATTGGGTCATGCTTGGAAACAATGGATGAATCAAACACCATTAGAACTAGTAGACCAAGATATAAAAGAATCATGCAACCATAGTGAAGTGGTTAGGTGTATTCATATTGGTTTACTATGTGTTCAAGAGAAACCTGATGATAGACCTACAATGGCAACAGTTGTTTCGTATCTCACTAGCCCTTCAGCGGAGTTGCCATTTCCGAGAGAGCTGACGGAGTCTATGCATAGTGGAATACTGCTAAAGATAGTAGGAGGGGAGTTTAGTTCGACTTCTATATCAACTTTCAATGGAATAAGTCCATCAGTAAGTTCTGCATTCTCTGCCACTGCTTAG 1983 0.3979 MFQLLFLFVCLTSITSTSSSLSPTYNDIYCPNNKTFESNNNTILKSNLNVLLSSLVTNATLGGADFYSTFMGLGTTNVVNGVFLCRGDVNSTACQSCVITAATNITRLCPNKTESIIWFDECMLRYSNRYFSPTSIVPRANLNNGKNITTSKLDSFNVTLMSFLDKLATEAADSQTTTQFAIGEDNFNLSISSSSVYGLAQCVNGLTNVQCEECLVNAARTLLTCCEGKQGARALLAWCNIRYDSYKFYNTTDVSSSLPPPSSGKNKSGSKTRMVLIVVIVIGSTILLCLGCYFLIRRSAWKKYKTLMRENFGDESAALQSLQYSLATVEAATKKFSSENKIGRGGFGEVYKGILIDGRQIAVKKLSLSSGQGAVEFINEVLLIAKLQHRNLVTLIGFCLEDQEKMLIYEYVPNKSLDYFLFDPNKTRFLQWFERYNIIEGIAHGIHYLHNHSRLKIIHRDLKPSNLLLDDNMNPKISDFGMARMVALDQDRGSTNRIVGTYGYMSQEYAMYGQYSEKSDVFSFGVIILEIISSKRNARSLLSDSDDDLLGHAWKQWMNQTPLELVDQDIKESCNHSEVVRCIHIGLLCVQEKPDDRPTMATVVSYLTSPSAELPFPRELTESMHSGILLKIVGGEFSSTSISTFNGISPSVSSAFSATA 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00012 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Vivi237g00012 660 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00012 660 Gene3D Phosphorylase Kinase; domain 1 299 411 - -
Vivi237g00012 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 297 411 - -
Vivi237g00012 660 ProSiteProfiles Gnk2-homologous domain profile. 136 248 IPR002902 -
Vivi237g00012 660 SUPERFAMILY Protein kinase-like (PK-like) 321 618 IPR011009 -
Vivi237g00012 660 FunFam cysteine-rich receptor-like protein kinase 10 412 614 - -
Vivi237g00012 660 Pfam Salt stress response/antifungal 30 128 IPR002902 -
Vivi237g00012 660 Pfam Salt stress response/antifungal 151 246 IPR002902 -
Vivi237g00012 660 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Vivi237g00012 660 ProSiteProfiles Gnk2-homologous domain profile. 24 131 IPR002902 -
Vivi237g00012 660 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Vivi237g00012 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 620 - -
Vivi237g00012 660 ProSiteProfiles Protein kinase domain profile. 336 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00012 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 131 - -
Vivi237g00012 660 CDD STKc_IRAK 342 608 - -
Vivi237g00012 660 Pfam Protein kinase domain 337 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00012 660 Gene3D - 139 248 IPR038408 -
Vivi237g00012 660 Gene3D - 24 131 IPR038408 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00012 5 631 Receptor kinase-like Gene Family AT4G05200 44.860 2.20e-180 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00012 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00012 - - vvo:131648390 1082.4