Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00009 ATGCTTCGGCTACTCTTTCTGTTCGTGTTCCTTACCGCAATAACTTCATTAGCATCATCACTATCTCCAACTTACAATGATATTTACTGTCCAAACAACGCAACCTTCGAATCCAACAACAACACAGTACTCAAATCAAATCTCAATGTCCTACTCACCTCTCTCGTCGCCAACGCCACGATAGGCGGCGCTGATTTCTACTCAACCTTCATGGGATTGGGAACAACCAACGTTGTCAGCGGTGTTTTCCTCTGCCGCGGTGACGTTAACTCCACCATGTGTCAGAATTGTGTAACCACTGCAGCTACAGATATAACACGCCTCTGTCCTAACAAAACGGAGTCGATTATATGGTATGACGAATGCATGCTGCGTTACACTAATCGTTACTTTAGCCCCACCAGTATCGTGCCAAGAGCAAATTTGAACGATGACAAGAACATCACTACCTTGAAATTGGATACCTTTAATGGATTGTTGTTGAGTTTCTTGGGTACGTTGGCTGCAGAAGCTGCAAATTCTCTGACAGCAAAGCAATTCGCGACTGGAGAAGAGAGCTTCGACTTTAGAAGCAACTCTTTGGTTTATGGGTTGGCGCAGTGTGTCAAGGGATTGACGATTGTTCAGTGTGACGAATGTTTAGTAAATGCTTCGAGAACTCTTCTTACATGTTGTGAAGGAAAACAAGGTGCTAGAGCTCTTCTTGCATGGTGTAATATCAGATATGATTCCTACAAGTTTTACGATACAACCGATGATTCATCTTCGCTTCCACCTCCACCTTCCGGAAAGAACAAGTCCGGGTCAACAACAAGAACGGTCTTGATTGTTGTTATTGTTACCGGGTCAACAATTCTACTTTGCTTAGGCTGCTATTTCCTCATCAGAAGATCAGCTTGGAAGAAATATAAAACTCTTATGAGAGAAAATTTTGGTGATGAAAGTGCGGCGTTACAGTCACTGCAGTATAGTTTAGCCACAGTTGAAGCAGCCACAAAGAAATTTTCATCAGAGAATAAAATAGGCAAGGGAGGATTTGGAGAGGTTTACAAGGGTAATCTTATAGATGGAAGGCAAATAGCTGTGAAAAAGCTATCTCTGAGTTCAGGACAAGGTGCAGGAGAGTTCATAAATGAGGTTTTACTAATAGCCAAACTTCAGCATAGAAATTTGGTAACCTTAATAGGCTTTTGCTTGGAAGACCAAGAGAAAATGCTCATTTACGAATACGTGCCCAACAAAAGTCTCGATTACTTTCTATTTGATAGCCACAAGACTAGATTACTACACTGGTTTGAGCGTTATAAAATCATCAAAGGGATTGCGCATGGAATACATTATCTACACAACCATTCAAGGTTGAAGATTATTCATCGTGATCTCAAACCTAGTAATGTATTGTTAGATGATAATATGAATCCTAAAATATCTGATTTCGGCATGGCAAGAATGGTGGCTCTAGATCAAGATCGGGGAAGTACAAATAGAATTGTTGGAACATATGGCTATATGTCGCCAGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGACGTATTCAGTTTTGGAGTCATAATTTTGGAGATAATTAGTTCAAAAACGAATACCCGTTCTCTTTTATTTGATAGCGACGATGACCTCTTGGGTCATGCTTGGAAACAATGGATGAATCAAACACCATTAGAACTAGTAGACCAAGATATAAAAGAATCATGCAACCATAGTGAATTGGTTAAGTGTATTCAAATTGGTTTATTATGTGTTCAAGAGAAACATGATGATAGACCTACAATGGCAACAATTGTTTCGTATCTCACTAGCCCTTCCGCGGAGTTGCCATTTCCAAGAGAGCTGACAGAGTCTACGCGCAGTGAAATTTTGCCAAAGATGGTAGGAGGGGAGTTAAGTTCGACTTCTATATCAACTTTCAATGGAATAAGTTCATAG 1950 0.4021 MLRLLFLFVFLTAITSLASSLSPTYNDIYCPNNATFESNNNTVLKSNLNVLLTSLVANATIGGADFYSTFMGLGTTNVVSGVFLCRGDVNSTMCQNCVTTAATDITRLCPNKTESIIWYDECMLRYTNRYFSPTSIVPRANLNDDKNITTLKLDTFNGLLLSFLGTLAAEAANSLTAKQFATGEESFDFRSNSLVYGLAQCVKGLTIVQCDECLVNASRTLLTCCEGKQGARALLAWCNIRYDSYKFYDTTDDSSSLPPPPSGKNKSGSTTRTVLIVVIVTGSTILLCLGCYFLIRRSAWKKYKTLMRENFGDESAALQSLQYSLATVEAATKKFSSENKIGKGGFGEVYKGNLIDGRQIAVKKLSLSSGQGAGEFINEVLLIAKLQHRNLVTLIGFCLEDQEKMLIYEYVPNKSLDYFLFDSHKTRLLHWFERYKIIKGIAHGIHYLHNHSRLKIIHRDLKPSNVLLDDNMNPKISDFGMARMVALDQDRGSTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIILEIISSKTNTRSLLFDSDDDLLGHAWKQWMNQTPLELVDQDIKESCNHSELVKCIQIGLLCVQEKHDDRPTMATIVSYLTSPSAELPFPRELTESTRSEILPKMVGGELSSTSISTFNGISS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00009 649 FunFam cysteine-rich receptor-like protein kinase 10 411 613 - -
Vivi237g00009 649 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 45 619 - -
Vivi237g00009 649 CDD STKc_IRAK 341 607 - -
Vivi237g00009 649 Gene3D - 140 247 IPR038408 -
Vivi237g00009 649 Gene3D - 24 131 IPR038408 -
Vivi237g00009 649 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 131 - -
Vivi237g00009 649 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 296 410 - -
Vivi237g00009 649 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Vivi237g00009 649 Pfam Protein tyrosine and serine/threonine kinase 338 606 IPR001245 GO:0004672|GO:0006468
Vivi237g00009 649 ProSiteProfiles Gnk2-homologous domain profile. 136 247 IPR002902 -
Vivi237g00009 649 ProSiteProfiles Gnk2-homologous domain profile. 24 131 IPR002902 -
Vivi237g00009 649 SUPERFAMILY Protein kinase-like (PK-like) 320 618 IPR011009 -
Vivi237g00009 649 SMART serkin_6 335 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00009 649 Gene3D Transferase(Phosphotransferase) domain 1 411 614 - -
Vivi237g00009 649 ProSiteProfiles Protein kinase domain profile. 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00009 649 Gene3D Phosphorylase Kinase; domain 1 298 410 - -
Vivi237g00009 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Vivi237g00009 649 Pfam Salt stress response/antifungal 154 245 IPR002902 -
Vivi237g00009 649 Pfam Salt stress response/antifungal 30 128 IPR002902 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00009 5 618 Receptor kinase-like Gene Family AT4G05200 44.674 3.21e-179 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00009 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00009 - - vvo:131648390 942.184