Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00005 ATGAGTTTGGCAAGGCCTTTGGCCTGGGAAATAGATGTCGGTTGGCGGACAGCAAGTTCATTTGGAATGTGGAATTTTAAACCGGAGACAAAACAGTCAGTGATAGCTAAAGTCAAAGAGACAAATGAAGATGAAGATGAAGTTAAAGCGGACAATGATCTTAAAGTTGGTGATTTGTTGCAATTTGACTTTGAAATCATCATATTAGCTACTAACAACTTCTCAGATGCAAATGAGCTTGGCAAAGGTGGATTTGGAAGTGTTTATAAGGGTACACTCGATGGACATGATGTTGCTATCAAAAGGTTGGCTACCAATTCTAAGCAAGGAGAAACAGAATTCAAGAATGAAGTATTGCTTACAGGAAAACTTCAACACCGAAATTTAGTTAAACTACTAGGTTTTTGTTTACAAAGAGGAGAAAGATTGCTAATATACGAGTTTGTCCCCAATAAAAGTCTCGACTATATCATATTTGGTAAATTACTATACTTTCTCCAGCCTCATCTTTGA 513 0.3684 MSLARPLAWEIDVGWRTASSFGMWNFKPETKQSVIAKVKETNEDEDEVKADNDLKVGDLLQFDFEIIILATNNFSDANELGKGGFGSVYKGTLDGHDVAIKRLATNSKQGETEFKNEVLLTGKLQHRNLVKLLGFCLQRGERLLIYEFVPNKSLDYIIFGKLLYFLQPHL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00005 170 FunFam Cysteine-rich receptor-like protein kinase 10 36 148 - -
Vivi237g00005 170 ProSitePatterns Protein kinases ATP-binding region signature. 80 101 IPR017441 GO:0005524
Vivi237g00005 170 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 161 - -
Vivi237g00005 170 Gene3D Phosphorylase Kinase; domain 1 30 148 - -
Vivi237g00005 170 ProSiteProfiles Protein kinase domain profile. 74 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00005 170 SUPERFAMILY Protein kinase-like (PK-like) 59 161 IPR011009 -
Vivi237g00005 170 Pfam Protein tyrosine and serine/threonine kinase 78 156 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00005 33 159 Receptor kinase-like Gene Family AT3G45860 58.140 2.78e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00005 PK_Tyr_Ser-Thr 3.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00005 - - vvo:131627275 345.125