Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi237g00004 ATGAACCCAAAAATTACAGATTTTGGCATTGCAAGATTGTTTGCTGCCAATCAAACCCATGGCATGACAAGTACAGTTATTGGAACTTTTGGATACATGGCTCCAGAGTATATCAGACATGGAGAATTTTCAATTAAATCAGATGTATTTAGTTTTGGTGTAATTATTTTGGAAATTGTTTGTGGTCGGAGAAACACGAAGATTCGTGATGGTGAATATATAGAAGATCTAATAAACATTGCATGGAAAAATTGGAAGACAGGGACAAGTTTAGATATTGTAGATCCAATGTTAGACCAAAGTATTAATAAGAATGAAAAAATGAGATGCATTCATGTTGGATTACTGTGTGTTCAAGAAGATATAGATGTAAGACCAACTATGAGTTCTATTTTACTATTGCTTAGTAGCACATCTTTCCCACTTTCTGAACCTTCTGAACCTCCATTTTTACTGCAAGCCAAAAAGGCATTATCTGTATCATTAAGTGACCAATATTCAGGTCTCACAAAGTCAAGTGATTCAGGATCAGGAAGTCAATTTACTCAAGTATCAACAAGTCCTTAG 567 0.3439 MNPKITDFGIARLFAANQTHGMTSTVIGTFGYMAPEYIRHGEFSIKSDVFSFGVIILEIVCGRRNTKIRDGEYIEDLINIAWKNWKTGTSLDIVDPMLDQSINKNEKMRCIHVGLLCVQEDIDVRPTMSSILLLLSSTSFPLSEPSEPPFLLQAKKALSVSLSDQYSGLTKSSDSGSGSQFTQVSTSP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi237g00004 188 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00004 188 Pfam Protein kinase domain 3 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi237g00004 188 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 140 - -
Vivi237g00004 188 Gene3D Transferase(Phosphotransferase) domain 1 1 142 - -
Vivi237g00004 188 SUPERFAMILY Protein kinase-like (PK-like) 2 168 IPR011009 -
Vivi237g00004 188 MobiDBLite consensus disorder prediction 166 188 - -
Vivi237g00004 188 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 179 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi237g00004 1 165 Receptor kinase-like Gene Family AT4G23150 48.485 2.01e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi237g00004 Pkinase 5.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi237g00004 - - vvo:131627266 348.591