Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi235g00042 ATGAAAAGGGCTATCTCGGTGGGATCATTAGAGGGAAGAGGTGTGATAGAACTCGAAAACGCGATTCTACTAAATCCTTCTCTATTTCCTAGAAAAGTTGCATCATATGAAGAAGATTCACCAATTGATCACGAGTGTGGAAAATTTTCACAAAATATAATAAGAAGTAAAGTTCTTAGCAGCATAAAAGCTGTAGTCCTTTCAACCAAGATAAACTTGCTTATGCCTTTTGGTCCTATGGCGATTTTGGTAGATAGATTGTTTCATAGTCATGGTTGGGTTTTTGTGTTCAGCTTATTAGGTATTATACCCTTGGCCGAGCGTTTAGGCTATACAACCGAGCAGCTAGCCCTCTTTACTGGACCGGCAGTTGGTGGTTTATTGTATGCCACATTTGGAAATGCAATGGAGTTAATTATATCAATCCACGCACTCAAAAGTGGTTTGATTCGTCTTGTTCAACAATCGCTACTAGGCTCAATTCTGTCTAACCTGTTGCTTCAGAAATTGACGTTAACTTATCATCAGGCAGATACTAGTGTGGATTTCGGATTATTATTAATGGCGGTGATGGGACTGTTATTTCCAGCAGTTCTCCATGCTACACAAACAGAACTAGAATATGGAAAATCTCAGTTATCTCTTTCAAGATTTACTAGTTGCATTATGCTTGGGGCATATGCTTCATATATAGTGTTTCAATTCAAGAGTCAGAAGAATTTGGAACTTCCAGTTTACGAGGACAAGAGTTTCGATGAAGATGCTTCGAATGATGCTGAAGCTCCTGAGATTTCAATGTGGGAATCAATGATATGGATTTCGATCTTAACAGGAGGTATATCTATCTTGTCAGAATACTTGGTTAAAACCATAGAGGGGGCATCAAAAGAGTTTCAAATGCCTGTGTCATTTCTTAGTGTTATTCTTCTTCCAGTAGTAGGGAATGCTGCAGAACATGTTGGATCTGTTATGTTTGCTATCAAAGACAAACTTGATATATCGCTGGCCGTAGCTGTAGGATCTTCAATACAAATATCAATGTTTATGATTCCATTTTGCGTGGTTGTTGGATGGATGATTGGATGCCCTATGGACTTAAATTTTCTGCCATTTGAAACAACTTCTCTTTTCATGTCAGTTATCATAGTTGCCTTCATGTTGCAAAATGGAACTTCAAACTACTTCAAAGGAATAGTGCTCATTCTTTGCTATTTGATAGTTTCTGCAAGTTATTTTGAACATATTGATCCTATGTCAGTTGGTGAGTTATGA 1272 0.3774 MKRAISVGSLEGRGVIELENAILLNPSLFPRKVASYEEDSPIDHECGKFSQNIIRSKVLSSIKAVVLSTKINLLMPFGPMAILVDRLFHSHGWVFVFSLLGIIPLAERLGYTTEQLALFTGPAVGGLLYATFGNAMELIISIHALKSGLIRLVQQSLLGSILSNLLLQKLTLTYHQADTSVDFGLLLMAVMGLLFPAVLHATQTELEYGKSQLSLSRFTSCIMLGAYASYIVFQFKSQKNLELPVYEDKSFDEDASNDAEAPEISMWESMIWISILTGGISILSEYLVKTIEGASKEFQMPVSFLSVILLPVVGNAAEHVGSVMFAIKDKLDISLAVAVGSSIQISMFMIPFCVVVGWMIGCPMDLNFLPFETTSLFMSVIIVAFMLQNGTSNYFKGIVLILCYLIVSASYFEHIDPMSVGEL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi235g00042 423 Gene3D - 255 411 IPR044880 -
Vivi235g00042 423 Gene3D - 122 245 IPR044880 -
Vivi235g00042 423 Pfam Sodium/calcium exchanger protein 93 235 IPR004837 GO:0016020|GO:0055085
Vivi235g00042 423 Pfam Sodium/calcium exchanger protein 271 407 IPR004837 GO:0016020|GO:0055085
Vivi235g00042 423 NCBIfam calcium/proton exchanger 75 412 IPR004798 GO:0006816|GO:0015369
Vivi235g00042 423 FunFam Vacuolar cation/proton exchanger 257 413 - -
Vivi235g00042 423 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 54 417 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi235g00042 31 417 Antiporters AT1G55730 59.500 3.31e-166 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi235g00042 K07300 - jre:109000743 493.812