Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi234g00033 ATGGCTAAACAACTTCATCATTCACATCACCTACTCCTTCTAATCTTCTTCCTCTCCATCATCCATTTTTCACACCAGTTACAGTCCTCACACTCTCAAACCCTCCTCAAACTCCAACAACTTCTAGGCTACCCTTCATCCCTATCAACCTTAACCACCACCCAAGATTTCTGCAACATTGAACCTACACCTTACTTAACACTAGTCTGCTATGACCAAAACTTAACACAGCTACATCTTGTTGGAAATACCAACAACAACAACTTCACCACCTCATTGCCTCAAAACTTCAACTCACACACTCTCTTTTCAACACTTTCCACTCTTTCATCCTTGAAAGTCCTCTCTTTGGTTTCTCTTGGCTTATGGGGTCCACTACCTGAAACCATAGGTGAATTTTCCTCATTGGAGATACTCAACATTAGCTCAAACTACTTCAGTGGAGAAATACCAGTTCACCTTTCATATCTCACCAATCTTCAATCACTAGTACTTGATGATAACAACTTCAATGGTGAGATTCCAAACTTGTTAACCTCTCTTCAAGGTTTGGTTGTTCTTAGCATGAAGAAGAATTTTCTTACAGGTAACTTGCCTAATTCAGTGAATCATCTTGTTACTCTTAGGGTTTTGGATCTGTCAAATAATCAACTATTTGGTGAATTACCTCATCTTCATAACTTGGTTAACCTTCAAGTTCTTCACTTGGAAAACAACAGATTAGGACCTCATTTTCCTTCTCTTCCTACAAAGCTAGTTTCACTTGTGCTTAGGAACAACAGTTTTAGGCTTGGTGTACCTTCTAATATAAGCTCTTTCTATCAGCTTCAAGAATTGGACCTTTCATTGAATGGCTTTGTAGGGCCATTTCCGCCGTCTTTGTTGTCGCTTCCTTCGATAAATTACCTCGATGTTTCATCGAATAAGTTTACTGGTATGCTCTTCGAGAATTTTTCGTGTAATGGCGATCTTCGGTTTGTGAATTTGTCTTCAAATCTTTTGAAAGGTGAACTACCTAGTTGTTTGAGAGAAAAGGAAAAGGTTGTTTTGTATGCTAGAAACTGTTTATCTGATGAGAAGAAACAAGATCAACATAGTTATAGTTTCTGCAGCAGTGAAGCGCTCGCGGTGAATATTTCGCCGCGTCAACAACAGAAACATAAAGGAACAGCTAGTAAAACAGTACTTGTTTCATCAAGTATTGGAGTTGTTGGAGTGTTGATTGTTGCTGTTGTTGTCTTGGCTGTTAATCAAGTTCATAAGAAAAATGTTTCGAAAACACCTTCGATGGCTACTTTGGAGCATGTTATTATCAGTCAAATACAGAATGAAGATAGAGTGAAAACTACTGCAAGGTCTATAGTAGAGCATATCATCAGAAAGGTACCTGATAAAAACGCTATGAAAACACTAACAAGATTCATAAAGGAGCATATCGCGAGCTTACTCGGTAACCGACGCCTTTCAAGGTCACCTTCAAGGTCCATAATCGAACATGTTTCATCAGTAAACACTGTAAAACTACTCACAGATGCAAGGTGTATATCAGAAACAATGAAGATGGGAACTGGTCTTCCTGCATATAGGACTTTTTCTTTGGAGCAACTTAAGGAAGCTACAAATAATTTTGATGAGTCAAGTCTAATAAGTGAAGGTCCACTTGGTCAGATATATAAAGGGGTTCTCTCTGATGGGATGCAAATTACTATTAGAGGAATGAAGATAAGAAAGAAGCATAGCCCTCAAGCTTATATGCACCATGTTGAGTTGATTTCAAAACTTAGGCATTCACACTTGGTTAGTTCACTTGGACATTCTTTTGAGTGCAACCAAGATGATTCAAGTGTCAATACTATATTTCTCATTTTCGAGTTTGTTCAAGACAAAAGTTTAAGAAGCCGCATCTCCGGATCAAATGGAGAGAAGCTTTGTTGGACACAGAGAATAGCAGCCACAATTGGAGTAGTGAAAGGCATTCAATATTTGCATACAGGGATAGTGCCTGGACTATATTCGAATAATATCAAGATAACTGATATTCTTTTGGATAACAATCATAATGTCAAAATAAGCAGTTATAATCTGCCGATCTATGCTGAAAACAAAAGAATGGTCAGCAATGGAACTTCTCATGGAGTAAAAGGAAATCTCCAAGCAAGGATAAACGATGGAGACAAGAATGATGTGTACGATATTGGTGTAATCTTGCTAGAAATCATTCTCGGTCGACCAATAATGTTCCACAATGAAGTGGGAACATTAAAAGATCTCTTACATGTAAGCATAAAAACTGATGATATAGCAAGAAGGAGTATTGTAGACCCATTTGTTCACAAGGAATGTTCAGATGAATCATTACTGAAAATGATGGAGATATGTGTAAGGTGTCTCTCAAGTGAACCGAATGAAAGACCTTCTGTGGAAGATATTCTTTGGAATTTGCAGTTTGCAGCACAAGTTCAGAATTCATGGAGAAGAGAAACTAGTGATTATAGAGACTCACCTAAATCATCCTCAAGAGAGACAAAGTTACAATGA 2538 0.3783 MAKQLHHSHHLLLLIFFLSIIHFSHQLQSSHSQTLLKLQQLLGYPSSLSTLTTTQDFCNIEPTPYLTLVCYDQNLTQLHLVGNTNNNNFTTSLPQNFNSHTLFSTLSTLSSLKVLSLVSLGLWGPLPETIGEFSSLEILNISSNYFSGEIPVHLSYLTNLQSLVLDDNNFNGEIPNLLTSLQGLVVLSMKKNFLTGNLPNSVNHLVTLRVLDLSNNQLFGELPHLHNLVNLQVLHLENNRLGPHFPSLPTKLVSLVLRNNSFRLGVPSNISSFYQLQELDLSLNGFVGPFPPSLLSLPSINYLDVSSNKFTGMLFENFSCNGDLRFVNLSSNLLKGELPSCLREKEKVVLYARNCLSDEKKQDQHSYSFCSSEALAVNISPRQQQKHKGTASKTVLVSSSIGVVGVLIVAVVVLAVNQVHKKNVSKTPSMATLEHVIISQIQNEDRVKTTARSIVEHIIRKVPDKNAMKTLTRFIKEHIASLLGNRRLSRSPSRSIIEHVSSVNTVKLLTDARCISETMKMGTGLPAYRTFSLEQLKEATNNFDESSLISEGPLGQIYKGVLSDGMQITIRGMKIRKKHSPQAYMHHVELISKLRHSHLVSSLGHSFECNQDDSSVNTIFLIFEFVQDKSLRSRISGSNGEKLCWTQRIAATIGVVKGIQYLHTGIVPGLYSNNIKITDILLDNNHNVKISSYNLPIYAENKRMVSNGTSHGVKGNLQARINDGDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLHVSIKTDDIARRSIVDPFVHKECSDESLLKMMEICVRCLSSEPNERPSVEDILWNLQFAAQVQNSWRRETSDYRDSPKSSSRETKLQ 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi234g00033 845 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 103 198 - -
Vivi234g00033 845 Gene3D Ribonuclease Inhibitor 248 363 IPR032675 -
Vivi234g00033 845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 81 838 - -
Vivi234g00033 845 Gene3D Ribonuclease Inhibitor 30 152 IPR032675 -
Vivi234g00033 845 Gene3D Transferase(Phosphotransferase) domain 1 627 839 - -
Vivi234g00033 845 Pfam Protein kinase domain 545 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi234g00033 845 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 517 625 - -
Vivi234g00033 845 MobiDBLite consensus disorder prediction 826 845 - -
Vivi234g00033 845 Gene3D Ribonuclease Inhibitor 153 247 IPR032675 -
Vivi234g00033 845 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 626 830 - -
Vivi234g00033 845 ProSiteProfiles Leucine-rich repeat profile. 207 229 IPR001611 GO:0005515
Vivi234g00033 845 MobiDBLite consensus disorder prediction 825 845 - -
Vivi234g00033 845 ProSiteProfiles Protein kinase domain profile. 543 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi234g00033 845 SUPERFAMILY Protein kinase-like (PK-like) 522 816 IPR011009 -
Vivi234g00033 845 SUPERFAMILY RNI-like 71 347 - -
Vivi234g00033 845 Gene3D Phosphorylase Kinase; domain 1 505 625 - -
Vivi234g00033 845 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 250 375 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi234g00033 44 824 Miscellaneous Gene Families AT3G03770 49.746 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vivi234g00033 Pkinase 3.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi234g00033 - - gmx:100797327 1139.41