Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi234g00032 ATGTTCCAAGATCCTTCAATCAAGCTTTTTGGAAGTGATATTCATATTCATATTCCCATTACCACAGATTCACACTCTTTCTCCTCTCAGATTCACTCTCTTCCACAACAACATCAACAACCCATCTACATCATGAATGGACTTGAGGAATCGACTAATGCTGATGTTAGTGTTTCTTTGAATGAAGTTTCTTGCAATCAAGCTTATCCACGAGATGATGCTAATGCTATTCCAAACATGTACGAAACCGGCACTTCAAAACCGGGGACGGAATTAGTTCATAGTACTTATGAACAGAAGACTGCCAAAAGAGATATTGACAATCAAGGGAAAGCTTTCAAGAAGCCAGACAAGGTTCTTCCATGTCCTCGCTGCAATAGTTTGGAGACAAAGTTTTGCTATTTCAACAATTACAATGTTAACCAACCAAGGCATTTCTGCAAAAATTGTCATAGGTATTGGACAGCTGGGGGAGCAATTCGGAACGTTCCTATTGGAGCCGGTAAGCGTAGAAATAAGCATTTGCCTTTGCAGAACGTTCCTGTCATACACACAGATTCCAACCCTGCTAGTCACATGGAAGAAGTTCCTCTTAGCGAATCACTAGAAACTGTGTTAAATCTCAAGAGCCGTAGAAAAATTGAAACGGACTCTTCTACTGTCAAAGACGATATTGAAGACCCTTCTAACTTTTCTGCAACAGCGGCTAATTCCGGCGAGAAGGAGCATTCTGAAAATGGAATAGAGCATGTTGGTTTGACACCACAATACAATGGCTTAATTCCTTTGCATTCACTTCATTATTATTCTGCTCCTCCATGGACTTATCCATGTTGGAATCCTACGCCGTTTCAGCCAGATAACATAACCTCCAGTCCTGCACCCATGATGGCAGTAGAAATACCGATGCCACCTTCATCATATTGGGGTTGTATGCCAAATTGGGTTGGCCAAATGGATGGCATTCAATCACCTTCATCTTCGGTTAGTAGTGGCACGTGTTCCGGTAATAGGTCACCAACTTTAGGAAAACATTGGAGAGATGGAAGTACACAAGCAGAAGATACGACGAAACACAATATTTGGGTGCCTAAAACTATCCGAATCAATAATCCAGAAGAGGCTGCGAAGAGTTCTATATGGTCAACTTTGAGAACAAAATCTCAACAGAACAAACCTATTATGAAAGGAGGTGTTTTTAAATCATTTGAACCTAAGTCAAGTGCAAGTTCTCGAGATTCAGACGATAATCAAATTCTAAGAGCTAACCCTGCTGCTTTCTCTCGGTCCGGAACTTTTCAAGAAAGCATTTAA 1314 0.4087 MFQDPSIKLFGSDIHIHIPITTDSHSFSSQIHSLPQQHQQPIYIMNGLEESTNADVSVSLNEVSCNQAYPRDDANAIPNMYETGTSKPGTELVHSTYEQKTAKRDIDNQGKAFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCHRYWTAGGAIRNVPIGAGKRRNKHLPLQNVPVIHTDSNPASHMEEVPLSESLETVLNLKSRRKIETDSSTVKDDIEDPSNFSATAANSGEKEHSENGIEHVGLTPQYNGLIPLHSLHYYSAPPWTYPCWNPTPFQPDNITSSPAPMMAVEIPMPPSSYWGCMPNWVGQMDGIQSPSSSVSSGTCSGNRSPTLGKHWRDGSTQAEDTTKHNIWVPKTIRINNPEEAAKSSIWSTLRTKSQQNKPIMKGGVFKSFEPKSSASSRDSDDNQILRANPAAFSRSGTFQESI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi234g00032 437 MobiDBLite consensus disorder prediction 214 245 - -
Vivi234g00032 437 MobiDBLite consensus disorder prediction 323 353 - -
Vivi234g00032 437 PANTHER CYCLIC DOF FACTOR 2 3 436 IPR045174 GO:0003700|GO:0006355
Vivi234g00032 437 MobiDBLite consensus disorder prediction 404 437 - -
Vivi234g00032 437 Pfam Dof domain, zinc finger 117 174 IPR003851 GO:0003677|GO:0006355
Vivi234g00032 437 ProSiteProfiles Zinc finger Dof-type profile. 120 174 IPR003851 GO:0003677|GO:0006355
Vivi234g00032 437 MobiDBLite consensus disorder prediction 225 241 - -
Vivi234g00032 437 ProSitePatterns Zinc finger Dof-type signature. 122 158 IPR003851 GO:0003677|GO:0006355
Vivi234g00032 437 MobiDBLite consensus disorder prediction 323 346 - -
Vivi234g00032 437 MobiDBLite consensus disorder prediction 387 437 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi234g00032 86 437 C2C2-Dof Transcription Factor Family AT3G47500 37.221 1.18e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi234g00032 zf-Dof 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi234g00032 - - cam:101489693 582.022