LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi234g00021	ATGGCAGAAGTTATCCCCAACATTCCCTCCGATTCCCTCGACAAATCCCCATCCTCCTCCGCCCCACCTCCCCCTCCTCCGCCACCTCCTCCCTCCTCATCCGCCGCTGATATCGATCTCCCTCCGCCTCATCATCCGCCTCCACACCCCTCCTACCGCCGTGGCAGGGACCGCAGAGATGACAGAGATTTCGATCGTCCTCCTAATCGCCGCGATTACTATGAGCGCAACATGTCGCCGCCGCAGAGAGATAGAGATAGAGAATTTAAGCGCAGGCGTAGTCCCAGTCCTCCGTATCGTGACCGCCGTCATTCTCCACCGCGGCGTTCTCCTCCGCATTACAATTACAAGCGCTCCAGGAGAGGAGGCAGCCCTCGAGGCGGTTATGGACCCGATGACAGAAGGTCTGGGTATGATCATTATGGTGGTTATGATAGGGGTGGAAGAGGTGGTTATGCCGATGACAGGTCTTATGGTAGGTTTGGGCACCGTTCAGCAGCAGGATTTCAAAATGGGATCCCTGATATGGAATCCAATCGTGGTTACGCAAACTTTCGAAGTAGTGGTGCACAAAGAGAAGGGTTGATGTCCTACAAGCAATTCATTCAGGAACTTGAGGATGATATACTACCAGCTGAAGCAGAACGTAGGTATCAAGAATATAGATCAGAGTACATTTCCACCCAAAAAAGAGCTTATTTCAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATACCATCCAACAAATTTGCTTAAAGTCATTGACAGGAGAAATGAAAGTGCTCGACAGCTGGCAAAAGATTTTTTGCTTGATTTGCAGAGTGGAACTTTTGATCTAAATCCAGGTTTAAGTGCCTCTTCATCCAACAAATCAGCGCAAGCTAGCGAACCAAATTCAGAGGAGGAAGCAGATGGCAAACGGAGAAGACATGGAAGGGGTTTTATTAAACAAAGTGATTTCACAGCTGCTCCAAAGACTCATCCTATCAGTTCTGAACCTAGACGAATACAAACAGATGTTCAACTGTCTCAGGCCCTTGTTCGCAAGCTTGATGCAGAAAAGGGTATTGGAGATAATATTTTATGCAGCAGTGATCATAATAAAAATGGTGATAAGTCTCACAGTGGATCTGTGGGTCCAGTAGTAATTATACGAGGCCTAACATCTGTTAAGGGTTTAGAGGGTGTTGAGCTTTTGGACACACTTGTTACATATCTGTGGCGGATTCATGGTGTAGATTACTATGGCATGATTGAGACTAATGAGGCTAAGGGCTTAAGGCATGTGAGGCCAGAAAGAACAGGGCATGAAGAAACAGGCAAGTCAGGGTCTGAATGGGAAAAAAAACTTGACTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCATTGGAAGTAATGGCTGCTAAGGAGAAAATAGATGCTGCAGCAGTTGAAGTGTTGGATCCATATGTTAGAAAAATCAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGTACAAACATCTGAAGCTGAAACACCCAGAGCTTGCTGTTGAACAAACTTCAAAATTGTGCGAGGATCTCTATACTCAAAATTACATGAATGATCCAGATGCTCCTGGTGGAAAGCCTGTCATGCAGCAATCTCAGGACAAGCCTTTAATAAAGCAAAGGTTAGGTCTGGAAGGCCGATTGAGAGATGATCGTGGTAATCATCGAGACCATGAACGGAATGACAGGATAAATGGAGATAGACCTGATTCCCCATCCCGCGAAAGGCAGTCTAAAGCACTTGAGATAGGAGACCAGAATGAAACAATGTACGACACTTACGCAGGGCATGGTGTACCTCCTTTTGCCTCAGATATGCCTCCTCCACCAGTATTGATGCCTGTACCTGGTGCTGGGCCATTAGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGCTAAGAGAGCAAGGAGGACCATCTTCATATGATGCCTCCGGAATAACGATGCTGTCTGGCCCTCATATGGGTGGACCGGCACCAATAATTGCTGTAAATCCGGCATTTAGACCAGATCCTCGGAAGATGCGAAGCTATCAAGATTTGGATGCTCCAGATGACGAGGTCACCGTGATAGACTATCGGAGTTTGTAA	2184	0.467	MAEVIPNIPSDSLDKSPSSSAPPPPPPPPPPSSSAADIDLPPPHHPPPHPSYRRGRDRRDDRDFDRPPNRRDYYERNMSPPQRDRDREFKRRRSPSPPYRDRRHSPPRRSPPHYNYKRSRRGGSPRGGYGPDDRRSGYDHYGGYDRGGRGGYADDRSYGRFGHRSAAGFQNGIPDMESNRGYANFRSSGAQREGLMSYKQFIQELEDDILPAEAERRYQEYRSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLKVIDRRNESARQLAKDFLLDLQSGTFDLNPGLSASSSNKSAQASEPNSEEEADGKRRRHGRGFIKQSDFTAAPKTHPISSEPRRIQTDVQLSQALVRKLDAEKGIGDNILCSSDHNKNGDKSHSGSVGPVVIIRGLTSVKGLEGVELLDTLVTYLWRIHGVDYYGMIETNEAKGLRHVRPERTGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVMAAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELAVEQTSKLCEDLYTQNYMNDPDAPGGKPVMQQSQDKPLIKQRLGLEGRLRDDRGNHRDHERNDRINGDRPDSPSRERQSKALEIGDQNETMYDTYAGHGVPPFASDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDASGITMLSGPHMGGPAPIIAVNPAFRPDPRKMRSYQDLDAPDDEVTVIDYRSL	727

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi234g00021	727	Pfam	SERRATE/Ars2, N-terminal domain	199	281	IPR021933	-
	Vivi234g00021	727	Pfam	Arsenite-resistance protein 2	441	627	IPR007042	-
	Vivi234g00021	727	MobiDBLite	consensus disorder prediction	543	630	-	-
	Vivi234g00021	727	MobiDBLite	consensus disorder prediction	53	105	-	-
	Vivi234g00021	727	MobiDBLite	consensus disorder prediction	568	610	-	-
	Vivi234g00021	727	ProSitePatterns	Zinc finger C2H2 type domain signature.	501	524	IPR013087	-
	Vivi234g00021	727	PANTHER	ARSENITE-RESISTANCE PROTEIN 2	53	725	IPR039727	GO:0006397
	Vivi234g00021	727	MobiDBLite	consensus disorder prediction	1	157	-	-
	Vivi234g00021	727	MobiDBLite	consensus disorder prediction	18	48	-	-
	Vivi234g00021	727	MobiDBLite	consensus disorder prediction	283	298	-	-
	Vivi234g00021	727	MobiDBLite	consensus disorder prediction	283	335	-	-
	Vivi234g00021	727	MobiDBLite	consensus disorder prediction	106	120	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi234g00021	67	727	C2H2 Transcription Factor Family	AT2G27100	62.849	0.0	746

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi234g00021	K27103		-	gmx:100811300	982.63